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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1022 |
| Cds size | 915 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2385.6447.1 >prot_H-paniculata_contig2385.6447.1 ID=prot_H-paniculata_contig2385.6447.1|Name=mRNA_H-paniculata_contig2385.6447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=305bp
MSTDEGFDFRRHHGFRNPPVLPPLPFPGALESTWQAQRFRHQDPRDRITF
RRAIGPWKSSAASVLPQDSRTPVPPRHGEQHGRYWDGYCETLSYGQQPFP
PPPHFRPAKAYDYGSTDHNGTSRASGDGVESEQQQRQHQQQPHETLGTTR
STGATKEHHHGVAPQASSSEVGDRNILDAFNSDSGGGGEGGGGVNLAGGD
IRLEESETTSPISESIVLRPSGSEEGFVEGQEGAVEEECMEEMGLIMSPE
WTEHFRNSEALQRYLRRAQNNSGGRGMFVTKQRSTHTHTHIYIYMLPLSY
QSAS* back to topmRNA from alignment at H-paniculata_contig2385:2292..4193- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2385.6447.1 ID=mRNA_H-paniculata_contig2385.6447.1|Name=mRNA_H-paniculata_contig2385.6447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1902bp|location=Sequence derived from alignment at H-paniculata_contig2385:2292..4193- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACATCTCGAGTACTATCCAAGAGATGTCCACAGACGAAGGCTTCGATTT
TCGCCGACACCATGGCTTCAGAAACCCCCCAGTGCTTCCTCCGCTTCCGT
TTCCAGGTGGACACACTCGTCATGTCATTTTCGCGAAGCGTCGTATTCAC
CAATTTGGAGATTAGTTTTATTCACAGAATTCACCTGCCTTCACCAGATG
CCTCGAATCTTCTCTGTGCTATTTGTTGTTCTTGAATGGCACTACTCGCT
TGCCTCAACTAGTGGATGCAATAGCCCTTGCTGTAATTAGCGGATGCGAT
AGTGATCGGAGATCTACTTTATTCTTCAGTTGCTGGTCTATATGACGTTC
GCTGCAGTCAATAAACGTAATACGCAGCTAGGCAGTCATTTAGAAATAGA
GATAAGACTACCCATACCTGCGGCAGGCCTAGCTCTTCTTACACCAACTG
TAGGTAGTTGAGGTGTGAAAAGGTGTCCCAAACCACCCTCTAATTGCAGG
GACTAGATGTCTTTGCTCGCCTTTCGCCCTTAAGCAACAATAAAACAATA
TCTACATTTCAGTCAGTGTAGATATACCACATGCACATTATACCCTTTCC
CCTCTTAACCCTTCCCCTATCTTTACAAGCAGGAGCTTTGGAATCAACAT
GGCAAGCGCAGCGCTTTCGTCACCAAGACCCCCGCGACCGTATCACGTTT
CGAAGAGCTATAGGACCCTGGAAATCGTCAGCAGCCTCTGTGCTCCCGCA
AGATTCCCGAACACCTGTTCCCCCGCGGCATGGTGAACAACACGGCAGAT
ACTGGGACGGCTACTGCGAAACGCTGAGTTATGGCCAACAGCCGTTCCCT
CCTCCGCCACATTTTCGACCTGCTAAGGCCTATGATTATGGGAGCACCGA
TCATAACGGCACCAGCAGGGCCTCTGGCGATGGTGTCGAAAGCGAGCAGC
AGCAACGACAGCACCAACAGCAACCGCATGAGACTTTGGGTACAACCAGA
AGCACCGGAGCTACCAAGGAGCATCATCATGGTGTCGCCCCTCAAGCCAG
CAGCTCTGAGGTTGGTGACAGGAACATATTGGATGCCTTCAATAGCGATA
GCGGTGGTGGTGGAGAGGGTGGTGGTGGCGTGAATCTCGCTGGCGGTGAT
ATCCGGCTGGAGGAAAGCGAGACAACCAGTCCGATCAGCGAATCGATCGT
TTTGAGGCCCTCTGGCAGCGAGGAGGGTTTTGTCGAAGGGCAAGAGGGAG
CTGTGGAGGAAGAGTGCATGGAGGAGATGGGACTGATCATGTCTCCCGAG
TGGACGGAGCACTTCCGGAATTCCGAAGCACTCCAGCGATATCGTGAGTA
CAGATTACGTTGTAGAGGACACCGCCTGTTTCTAGTCGTTACTCGATCGT
GCACTCATCTGGAAAGTTTCGCAGGTGGTGAAATATTCGGGTTTGCCGTT
TGATACTTGATGATGATGGCACCCAGATAACGCCCGCTGACCGTGCATAC
CTGATGCAATATTTTTTGACGGGGTGATCTCCGATCTACGGGGAGCGGCT
GGGTTTACGTTTGTTGGAGGTGACGGCAGTCTGATTTCGCGCCGGCTCTC
CCGCCCTCTGGTGTGCCTGAATTTCCTTTGTGAATATGGTTTCGTCGATT
CGTGCTACATGGGGTTTCCTCTCGACTATACTCCGATGAGGGTGCAGTTC
GACGGGCTCAGAACAACAGCGGCGGGAGAGGTATGTTCGTCACAAAGCAA
CGTTCTACACACACACACACACATATATATATATATATGTTACCTCTATC
CTATCAGTCTGCCTCCTAACGATATTTTGTAAATATCTTGTGCAATTTGG
AGTTTCGTCAAAAATGAAGAATATCATTCGAAAGCCTACACGTTCGGCTT
GC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2385:2292..4193- >mRNA_H-paniculata_contig2385.6447.1 ID=mRNA_H-paniculata_contig2385.6447.1|Name=mRNA_H-paniculata_contig2385.6447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1830bp|location=Sequence derived from alignment at H-paniculata_contig2385:2292..4193- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCACAGACGAAGGCTTCGATTTTCGCCGACACCATGGCTTCAGAAA
CCCCCCAGTGCTTCCTCCGCTTCCGTTTCCAGATGTCCACAGACGAAGGC
TTCGATTTTCGCCGACACCATGGCTTCAGAAACCCCCCAGTGCTTCCTCC
GCTTCCGTTTCCAGGAGCTTTGGAATCAACATGGCAAGCGCAGCGCTTTC
GTCACCAAGACCCCCGCGACCGTATCACGTTTCGAAGAGCTATAGGACCC
TGGAAATCGTCAGCAGCCTCTGTGCTCCCGCAAGATTCCCGAACACCTGT
TCCCCCGCGGCATGGTGAACAACACGGCAGATACTGGGACGGCTACTGCG
AAACGCTGAGTTATGGCCAACAGCCGTTCCCTCCTCCGCCACATTTTCGA
CCTGCTAAGGCCTATGATTATGGGAGCACCGATCATAACGGCACCAGCAG
GGCCTCTGGCGATGGTGTCGAAAGCGAGCAGCAGCAACGACAGCACCAAC
AGCAACCGCATGAGACTTTGGGTACAACCAGAAGCACCGGAGCTACCAAG
GAGCATCATCATGGTGTCGCCCCTCAAGCCAGCAGCTCTGAGGTTGGTGA
CAGGAACATATTGGATGCCTTCAATAGCGATAGCGGTGGTGGTGGAGAGG
GTGGTGGTGGCGTGAATCTCGCTGGCGGTGATATCCGGCTGGAGGAAAGC
GAGACAACCAGTCCGATCAGCGAATCGATCGTTTTGAGGCCCTCTGGCAG
CGAGGAGGGTTTTGTCGAAGGGCAAGAGGGAGCTGTGGAGGAAGAGTGCA
TGGAGGAGATGGGACTGATCATGTCTCCCGAGTGGACGGAGCACTTCCGG
AATTCCGAAGCACTCCAGCGATATCGAGCTTTGGAATCAACATGGCAAGC
GCAGCGCTTTCGTCACCAAGACCCCCGCGACCGTATCACGTTTCGAAGAG
CTATAGGACCCTGGAAATCGTCAGCAGCCTCTGTGCTCCCGCAAGATTCC
CGAACACCTGTTCCCCCGCGGCATGGTGAACAACACGGCAGATACTGGGA
CGGCTACTGCGAAACGCTGAGTTATGGCCAACAGCCGTTCCCTCCTCCGC
CACATTTTCGACCTGCTAAGGCCTATGATTATGGGAGCACCGATCATAAC
GGCACCAGCAGGGCCTCTGGCGATGGTGTCGAAAGCGAGCAGCAGCAACG
ACAGCACCAACAGCAACCGCATGAGACTTTGGGTACAACCAGAAGCACCG
GAGCTACCAAGGAGCATCATCATGGTGTCGCCCCTCAAGCCAGCAGCTCT
GAGGTTGGTGACAGGAACATATTGGATGCCTTCAATAGCGATAGCGGTGG
TGGTGGAGAGGGTGGTGGTGGCGTGAATCTCGCTGGCGGTGATATCCGGC
TGGAGGAAAGCGAGACAACCAGTCCGATCAGCGAATCGATCGTTTTGAGG
CCCTCTGGCAGCGAGGAGGGTTTTGTCGAAGGGCAAGAGGGAGCTGTGGA
GGAAGAGTGCATGGAGGAGATGGGACTGATCATGTCTCCCGAGTGGACGG
AGCACTTCCGGAATTCCGAAGCACTCCAGCGATATCTTCGACGGGCTCAG
AACAACAGCGGCGGGAGAGGTATGTTCGTCACAAAGCAACGTTCTACACA
CACACACACACATATATATATATATATGTTACCTCTATCCTATCAGTCTG
CCTCCTAATTCGACGGGCTCAGAACAACAGCGGCGGGAGAGGTATGTTCG
TCACAAAGCAACGTTCTACACACACACACACACATATATATATATATATG
TTACCTCTATCCTATCAGTCTGCCTCCTAA back to top
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