prot_H-paniculata_contig23834.6443.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23834.6443.1
Unique Nameprot_H-paniculata_contig23834.6443.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length312
Homology
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BLAST of mRNA_H-paniculata_contig23834.6443.1 vs. uniprot
Match: D7FY72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY72_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 9.530e-45
Identity = 154/381 (40.42%), Postives = 184/381 (48.29%), Query Frame = 0 
Query:    1 GRSCLSPTNSSVPVLYVFGKGQLDVQDLATTLLSGPL-----APPPLRDLCDGGRGXXXXXXXXXSKESTGAGKETQAAGVDPVLLLYDVTYSHAIPSLLEALGEGYVRGGNGGARLVVGYPTPQAYSP-NGRSSNXXXXXXXXXXXKVAVVDEGTDA------GP------------VVSACRRGEDNEAAGCXXXXXXXXXRQGKDAAKALLSEDYPPAAXXXXXXXXXXTKDSIALSLATMPSLAEQATKNE-------TPSVAD--------------------------------------IRIGGLGVEVESEEALKRYKLFFVGGEGRQLTNVLLRCAGCRDRLRYDPLLPRGERLVAETGRGNRDLMRRYVCV 312
            GR+CLSPTNSSVPVLYVFG+G LDVQ LA+TLLSGPL     A P           XXXXXXXXX                  VLLLYDVTY++AIP+LLE L      GG+   RLVVG+PT +AYSP  G  +                   G+D       GP                C R    E AGC            + A             XXXXXXXXXX     A ++++ PS     T          TPS  +                                      +RIGGLGV++ESEE L+R+KL FVGGEGRQL+NVL+RCAGC DR+RYDP LP GER++ +T +GN+DLMRRY  V
Sbjct:  158 GRACLSPTNSSVPVLYVFGRGDLDVQHLASTLLSGPLSATAAATPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLYDVTYAYAIPALLERLD---AAGGSKRGRLVVGFPTSEAYSPMTGGCAKPAAAGYGCGATSTKGEGGGSDGCGRSDRGPPCTGDSRSAEKETTGECCRRSGGENAGCGTGGRGTGHPSREGALGXXXXXXXXXXXXXXXXXXXXXXXXXPAGAVSSPPSAXXSTTSGGLGNPGQGTPSTPETDTRTPGQSAGAAPGEGGAALSTAGTPAPLSSCQRKRRVRIGGLGVDLESEEELRRHKLVFVGGEGRQLSNVLMRCAGCVDRMRYDPCLPPGERVIGDTRKGNKDLMRRYYLV 535
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BLAST of mRNA_H-paniculata_contig23834.6443.1 vs. uniprot
Match: A0A836CDL8_9STRA (Putative diphthamide biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.450e-8
Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:  237 DIRIGGLGVEVESEEALKRYKLFFVGGEGRQLTNVLLRCAGCRDRLRYDPLLPRGE--------RLVAETGRGNRDLMRRY 309
            D+ I GL V+  +E  L++  + ++GGEGR+L+NVL+RCAG   R  YDP  P G         RL  E    NRDLMRRY
Sbjct:  150 DVVIVGLTVQGITEAMLQQCSVLYIGGEGRRLSNVLMRCAGYIGRWSYDPRQPGGSLDGKQRTGRLREEVAGANRDLMRRY 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23834.6443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FY72_ECTSI9.530e-4540.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDL8_9STRA9.450e-845.68Putative diphthamide biosynthesis protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010014Diphthamide synthesis DHP2PANTHERPTHR10762:SF22-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE SYNTHASE SUBUNIT 2coord: 1..312
IPR016435Diphthamide synthesis DPH1/DPH2PANTHERPTHR10762DIPHTHAMIDE BIOSYNTHESIS PROTEINcoord: 1..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23834contigH-paniculata_contig23834:1995..3032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23834.6443.1mRNA_H-paniculata_contig23834.6443.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23834 1995..3032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23834.6443.1 ID=prot_H-paniculata_contig23834.6443.1|Name=mRNA_H-paniculata_contig23834.6443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
GRSCLSPTNSSVPVLYVFGKGQLDVQDLATTLLSGPLAPPPLRDLCDGGR
GGGGAGGAGGSKESTGAGKETQAAGVDPVLLLYDVTYSHAIPSLLEALGE
GYVRGGNGGARLVVGYPTPQAYSPNGRSSNSSSSSSSSSSSKVAVVDEGT
DAGPVVSACRRGEDNEAAGCGCAATATATRQGKDAAKALLSEDYPPAAAA
TATAPTPTTKDSIALSLATMPSLAEQATKNETPSVADIRIGGLGVEVESE
EALKRYKLFFVGGEGRQLTNVLLRCAGCRDRLRYDPLLPRGERLVAETGR
GNRDLMRRYVCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010014DHP2
IPR016435DPH1/DPH2