prot_H-paniculata_contig2381.6439.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2381.6439.1
Unique Nameprot_H-paniculata_contig2381.6439.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length659
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2381.6439.1 vs. uniprot
Match: A0A6H5JU77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU77_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 6.850e-28
Identity = 117/151 (77.48%), Postives = 126/151 (83.44%), Query Frame = 0 
Query:  462 ANATTINQLHKASVVGDLTSISRFIKDGGNLEAQSFCGRTALHYAAFYGHADVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDTEGNAPQAYSEDDELFEMLVQARRPTFPLPTRFLSQVVGRRPAACLACYA 612
            A +  ++QLHKASVVGDL +ISRFIKDGGNLEAQSFCGRTALHYAAF        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDTEGNA QAYSED+EL+EML +ARR  FP+PT  L+  V RRP A L  YA
Sbjct:  373 AISARVHQLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYA 523
[Close]
BLAST of mRNA_H-paniculata_contig2381.6439.1 vs. uniprot
Match: D8LT48_ECTSI (UPF0020 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT48_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 2.400e-22
Identity = 108/143 (75.52%), Postives = 114/143 (79.72%), Query Frame = 0 
Query:  470 LHKASVVGDLTSISRFIKDGGNLEAQSFCGRTALHYAAFYGHADVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDTEGNAPQAYSEDDELFEMLVQARRPTFPLPTRFLSQVVGRRPAACLACYA 612
            LHKASVVGDL +ISRFIKDGGNLEAQSFCGRTAL             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ARDTEGNA QAYSED+EL+EML +ARR  FP+PT  L+  V RRP A L  YA
Sbjct:  534 LHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEARDTEGNAAQAYSEDEELYEMLARARRRLFPMPTAVLADAVERRPVAALGVYA 676
[Close]
BLAST of mRNA_H-paniculata_contig2381.6439.1 vs. uniprot
Match: A0A836C7K4_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K4_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.100e-10
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:  468 NQLHKASVVGDLTSISRFIKDGGNLEAQSFCGRTALHYAAFYGHADVAR 516
            ++LH  +VVGDL +    ++ G +LE QSFCGRTALHYAAFYGHA V R
Sbjct:    1 SRLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHASVVR 49
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2381.6439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JU77_9PHAE6.850e-2877.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT48_ECTSI2.400e-2275.52UPF0020 domain-containing protein (Fragment) n=1 T... [more]
A0A836C7K4_9STRA3.100e-1061.22Ankyrin repeat-containing domain protein (Fragment... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 547..561
score: 43.89
coord: 499..514
score: 46.0
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 531..560
e-value: 8.6E-6
score: 35.2
coord: 465..494
e-value: 2700.0
score: 1.7
coord: 498..527
e-value: 2.0E-5
score: 34.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 531..563
score: 14.746
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 498..530
score: 11.781
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 470..562
e-value: 2.4E-13
score: 50.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 465..568
score: 30.343
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 423..531
e-value: 2.2E-11
score: 41.0
coord: 527..586
e-value: 1.1E-7
score: 28.8
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 487..582
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 487..582
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 467..525
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 467..525
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..604
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 605..630
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 631..659
NoneNo IPR availableTMHMMTMhelixcoord: 605..627
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 462..587
e-value: 5.2E-30
score: 105.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 468..579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2381contigH-paniculata_contig2381:9401..17715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2381.6439.1mRNA_H-paniculata_contig2381.6439.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2381 9287..17715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2381.6439.1 ID=prot_H-paniculata_contig2381.6439.1|Name=mRNA_H-paniculata_contig2381.6439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=659bp
MPLRRRRSPSFRRSEGAEDQDVAAAAHPHMPLSPSSETDAGVAAGEEDGA
DTFEPSGILDHGYEEGITPGSSPIRHLNGDFSALRRTRFPTQFHPSLPST
HTQVQAHQEDTPRLRPAAEPPRGPLEMTSTPNSSTAAEDAVMAAEAASPS
GSGGRPPGLASASLPIASSVPAAAAMLYSDRQSEPNGIASDNVVGAPAPP
YVPQPQPPPAPRLRPLQIDGRVATASAAAAATPAAAAAAAAAGVANRTVS
GTPAIGATGISGIAHIHIVRDDRSQRLESNPNSLNEMRRRRLHMNSHLDE
AVAARDVGEVEPSHSSAAAGDDVELSNQTLAAIHHFRDQQQRRREEDAEE
TSLWRPRFLARDGRSNRNNRGGVRARASGRSGTGAGRGSASASRGASDAA
VEGIGSTPSGGGGGEPGRGTSGITRGGNGSGGGGSDGSAAAADVEVDADA
DAAATAAGARPANATTINQLHKASVVGDLTSISRFIKDGGNLEAQSFCGR
TALHYAAFYGHADVARALILAGANVCSRGGGNSTPLHFAAWGGNKKVVRL
LLDYGADVEARDTEGNAPQAYSEDDELFEMLVQARRPTFPLPTRFLSQVV
GRRPAACLACYAVAVILLALALVVLMLALASSPLGRGLLGFTADDPVLPT
AASVGGGGR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf