prot_H-paniculata_contig238.6437.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig238.6437.1
Unique Nameprot_H-paniculata_contig238.6437.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
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BLAST of mRNA_H-paniculata_contig238.6437.1 vs. uniprot
Match: D7FV21_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV21_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 7.480e-48
Identity = 94/164 (57.32%), Postives = 109/164 (66.46%), Query Frame = 0 
Query:   11 QSWLQRQAALSTFDGYRQGESLSCVKPTAAPAPSSRRTDDNIPEAGGVSGIVYDPTDASADWSGFAPKHRLGRRM--AGQPTAHRETIARSEEHGIVPAPDAETQDCIRTRRRRCAQPETRYE-LILGGPTCTVLDTAQRFTTCARAANAHEPTPLELKSVKCR 171
            QSWLQ QA+ S FDGYR  +  S VK TAAPAP++       PEAG    +VYDP DASADWSGFAP+H  GRRM   G P AHRETI RSEEHGIVPA D  T+D ++TRRR  A P    E L+LGG      +  +RFTT ARAAN  E TPL++KS + R
Sbjct:   40 QSWLQEQASRSKFDGYRDSQQFSNVKVTAAPAPTACSA---APEAGRNGDVVYDPQDASADWSGFAPRHTAGRRMHHTGLPAAHRETIVRSEEHGIVPAADTVTEDSVKTRRRAVAHPPRAGEGLVLGGAGAP--EPRERFTTVARAANERESTPLDMKSEEFR 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig238.6437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV21_ECTSI7.480e-4857.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig238contigH-paniculata_contig238:29853..33085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig238.6437.1mRNA_H-paniculata_contig238.6437.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig238 29853..33085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig238.6437.1 ID=prot_H-paniculata_contig238.6437.1|Name=mRNA_H-paniculata_contig238.6437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MRYPYHCTMKQSWLQRQAALSTFDGYRQGESLSCVKPTAAPAPSSRRTDD
NIPEAGGVSGIVYDPTDASADWSGFAPKHRLGRRMAGQPTAHRETIARSE
EHGIVPAPDAETQDCIRTRRRRCAQPETRYELILGGPTCTVLDTAQRFTT
CARAANAHEPTPLELKSVKCR
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