prot_H-paniculata_contig2379.6431.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2379.6431.1
Unique Nameprot_H-paniculata_contig2379.6431.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length606
Homology
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 2.590e-73
Identity = 161/341 (47.21%), Postives = 203/341 (59.53%), Query Frame = 0
Query:    1 MVKTSGKRSAVTAGLTVMAGQERVV--KVDRGLQSLMDYGDNMEEFAAIFAHLPSKLTQDLETVAALSEDTHARTQELSRLQAELIERSKAKLRQAGSCPDHIEGLIDLAMLEKVLEKREVVTKGMNKAVDXXXXXXXXLDSCINRVDDEISRLEADVKENYGVVPDYASLAPPEVVPEVSFIASEHCSIADLLAPGAADSDGQNKAAASGTAGKGGKGAGKTVGGSRVVGGPATGVAQEAYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKV---EISFWLCPGCSRDKEEKDRREQAEKLRIAALVRNSAANAVKVAP---VKLPSDD 333
            MVK +GKRS+V      +A    V+  K D  LQSLMDYGDN++EF AI AHLP++L  DL+ VA LSE+TH  T ELSR QAE++ER+KAK RQ  + P+ ++ LID   L+K  +KR  V + +++ V         LD+CI  +DDEI +LE DVKE+YG +PD  SLAP E+  E    A             A        AA    A  GG GAG         GG     + +  + NEP+YC+CRQVG+GDMIGCDN+DCEHGEWFHY CVGLE V   EI FWLCPGCS D   K++REQ E+       R ++AN   V P   VKLP +D
Sbjct:    1 MVK-AGKRSSVGP----IAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQM-TRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNIDDEIDKLEKDVKESYGAMPDIPSLAP-EMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALX---XXAGGAVR--SNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLER-------RATSANTTPVKPAAAVKLPEND 322          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 6.740e-69
Identity = 148/314 (47.13%), Postives = 185/314 (58.92%), Query Frame = 0
Query:   26 KVDRGLQSLMDYGDNMEEFAAIFAHLPSKLTQDLETVAALSEDTHARTQELSRLQAELIERSKAKLRQAGSCPDHIEGLIDLAMLEKVLEKREVVTKGMNKAVDXXXXXXXXLDSCINRVDDEISRLEADVKENYGVVPDYASLAPPEVVPEVSFIASEHCSIADLLAPGAADSDGQNKAAASGTAGKGGKGAGKTVGGSRVVGGPATGVAQEAYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKV---EISFWLCPGCSRDKEEKDRREQAEKLRIAALVRNSAANAVKVAP---VKLPSDD 333
            K D  LQSLMDYGDN++EF AI AHLP++L  DL+ VA LSE+TH  T ELSR QAE++ER+KAK RQ  + P+ ++ LID   L+K  EKR  V + +++ V         LD+CI  +DDEI +LE DVKE+YG +PD  SLAP E+  E    A             A        AA    A  GG GA               G   +  + NEP+YC+CRQVG+GDMIGCDN+DCEHGEWFHY CVGLE V   EI FWLCPGCS D   K++REQ E+       R ++ N   V P   VKLP ++
Sbjct:   14 KTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQM-TRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIDDEIDKLEKDVKESYGAMPDIPSLAP-EMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAXXXX---XXXXXXVRG--NDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLER-------RATSTNTTPVKPAAAVKLPENN 313          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO)

HSP 1 Score: 88.6 bits (218), Expect = 8.070e-18
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  241 NPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISF---WLCPGC 292
            +PNEP YCIC QV YGDMI CDN++CE GEWFHY+CVGL   E  F   W CP C
Sbjct:   26 DPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGLTP-ETRFKGKWFCPTC 79          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A7J7JZC1_BUGNE (Inhibitor of growth protein 3 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JZC1_BUGNE)

HSP 1 Score: 89.4 bits (220), Expect = 1.040e-17
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  239 AYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEKDRR 302
            AY+PNEP YC+C QV YG+M+GCDN DC   EWFHY CVGL       W CP C+   + + RR
Sbjct:   52 AYDPNEPRYCVCNQVSYGEMVGCDNTDCTI-EWFHYGCVGLTSAPKGKWYCPSCTAAMKRRGRR 114          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: Q1RKY8_DROME (IP15341p n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=Q1RKY8_DROME)

HSP 1 Score: 87.8 bits (216), Expect = 1.080e-17
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:  240 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEK 299
            ++PNEP YC+C QV YG+MIGCDN DC   EWFH+ CVGL       W CP C++D+++K
Sbjct:   13 FDPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFACVGLTTKPKGKWFCPKCTQDRKKK 71          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A7S6P9_NEMVE (Inhibitor of growth protein 3 (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S6P9_NEMVE)

HSP 1 Score: 87.4 bits (215), Expect = 1.390e-17
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  240 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEKDRR 302
            Y+PNEP YC+C QV YG+M+GCDN+DC   EWFHY CVGL       W CP CS   ++K  R
Sbjct:    6 YDPNEPRYCLCNQVSYGEMVGCDNNDCPI-EWFHYGCVGLTDAPKGKWYCPQCSTQIKQKRSR 67          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A9UYR1_MONBE (Inhibitor of growth protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UYR1_MONBE)

HSP 1 Score: 90.9 bits (224), Expect = 2.280e-17
Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 0
Query:  232 ATGVAQE----AYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGL-EKVEISFWLCPGC 292
            A  VAQ+    A +PNEP YCIC QV +G+MIGCDN+DC H EWFHY CVGL EK + S W CP C
Sbjct:  116 AQAVAQKKEEMAIDPNEPRYCICNQVSFGEMIGCDNEDCPH-EWFHYACVGLTEKPKGSKWYCPNC 180          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: B7PV48_IXOSC (Inhibitor of growth protein n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PV48_IXOSC)

HSP 1 Score: 89.4 bits (220), Expect = 2.780e-17
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  241 NPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEK 299
            +PNEP YC+C QV YG+MIGCDN DC   EWFH+TCVGL       W CP CS D+++K
Sbjct:   93 DPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFTCVGLTSKPKGKWFCPKCSTDRKKK 150          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: C3YVL7_BRAFL (Inhibitor of growth protein 3 n=4 Tax=Branchiostoma TaxID=7737 RepID=C3YVL7_BRAFL)

HSP 1 Score: 86.3 bits (212), Expect = 3.460e-17
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0
Query:  240 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCS 293
            ++PNEP YCIC QV YGDM+GCDN+DC   EWFHY CVG+ +     W CP C+
Sbjct:    5 FDPNEPRYCICNQVSYGDMVGCDNEDCPI-EWFHYGCVGISEPPKGKWYCPQCT 57          
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A6B2E6U4_9DIPT (Inhibitor of growth protein 3 (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E6U4_9DIPT)

HSP 1 Score: 86.3 bits (212), Expect = 6.030e-17
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  240 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCS 293
            Y+PNEP YCIC QV YGDM+ CDN+DC   EWFHY CVG+ +     W CP C+
Sbjct:   25 YDPNEPRYCICNQVSYGDMVACDNEDCPF-EWFHYPCVGITQSPKGKWYCPQCT 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA4_9PHAE2.590e-7347.21PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVE0_ECTSI6.740e-6947.13PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
A0A0A9NUC7_ARUDO8.070e-1865.45PHD-type domain-containing protein n=1 Tax=Arundo ... [more]
A0A7J7JZC1_BUGNE1.040e-1754.69Inhibitor of growth protein 3 n=1 Tax=Bugula nerit... [more]
Q1RKY8_DROME1.080e-1755.00IP15341p n=1 Tax=Drosophila melanogaster TaxID=722... [more]
A7S6P9_NEMVE1.390e-1755.56Inhibitor of growth protein 3 (Fragment) n=2 Tax=N... [more]
A9UYR1_MONBE2.280e-1762.12Inhibitor of growth protein n=1 Tax=Monosiga brevi... [more]
B7PV48_IXOSC2.780e-1759.32Inhibitor of growth protein n=1 Tax=Ixodes scapula... [more]
C3YVL7_BRAFL3.460e-1759.26Inhibitor of growth protein 3 n=4 Tax=Branchiostom... [more]
A0A6B2E6U4_9DIPT6.030e-1759.26Inhibitor of growth protein 3 (Fragment) n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 247..293
e-value: 4.7E-7
score: 39.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 243..309
e-value: 5.7E-22
score: 79.4
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 41..300
NoneNo IPR availablePANTHERPTHR10333:SF42INHIBITOR OF GROWTH PROTEINcoord: 41..300
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 245..295
score: 8.787
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 234..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2379contigH-paniculata_contig2379:5343..13363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2379.6431.1mRNA_H-paniculata_contig2379.6431.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2379 4890..13399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2379.6431.1 ID=prot_H-paniculata_contig2379.6431.1|Name=mRNA_H-paniculata_contig2379.6431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp
MVKTSGKRSAVTAGLTVMAGQERVVKVDRGLQSLMDYGDNMEEFAAIFAH
LPSKLTQDLETVAALSEDTHARTQELSRLQAELIERSKAKLRQAGSCPDH
IEGLIDLAMLEKVLEKREVVTKGMNKAVDVTKGMYEALDSCINRVDDEIS
RLEADVKENYGVVPDYASLAPPEVVPEVSFIASEHCSIADLLAPGAADSD
GQNKAAASGTAGKGGKGAGKTVGGSRVVGGPATGVAQEAYNPNEPLYCIC
RQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEKD
RREQAEKLRIAALVRNSAANAVKVAPVKLPSDDDDDDDDDDDDEEQEGEG
APKAEVSTGIGVELGASASLTVSMEKKENTNPVEGPVTGTGTSEQAIKRE
NNQSTSAAAGRDIGEPSRGYNGEGGSGTSEYLGLEYRVADGSAKTNVTPM
RPGADEESGKYVGSHSIREVTAGAGAVGGAMGEMASAAIENAVENVTVAI
NSTNNETAVRDAPPSSGGAAVAGVPAPSASDGTSAIVGVISASVGDAMGR
FVSSDDFSEEAKVKPPAQNEGALASNMRAHHPVAVVSGNTPEAQGVGETE
NVPPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR028651ING_fam
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD