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Homology
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE) HSP 1 Score: 249 bits (636), Expect = 7.540e-72 Identity = 161/341 (47.21%), Postives = 203/341 (59.53%), Query Frame = 1
Query: 37 MVKTSGKRSAVTAGLTVMAGQERVV--KVDRGLQSLMDYGDNMEEFAAIFAHLPSKLTQDLETVAALSEDTHARTQELSRLQAELIERSKAKLRQAGSCPDHIEGLIDLAMLEKVLEKREVVTKGMNKAVDXXXXXXXXLDSCINRVDDEISRLEADVKENYGVVPDYASLAPPEVVPEVSFIASEHCSIADLLAPGAADSDGQNKAAASGTAGKGGKGAGKTVGGSRVVGGPATGVAQEAYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKV---EISFWLCPGCSRDKEEKDRREQAEKLRIAALVRNSAANAVKVAP---VKLPSDD 1035
MVK +GKRS+V +A V+ K D LQSLMDYGDN++EF AI AHLP++L DL+ VA LSE+TH T ELSR QAE++ER+KAK RQ + P+ ++ LID L+K +KR V + +++ V LD+CI +DDEI +LE DVKE+YG +PD SLAP E+ E A A AA A GG GAG GG + + + NEP+YC+CRQVG+GDMIGCDN+DCEHGEWFHY CVGLE V EI FWLCPGCS D K++REQ E+ R ++AN V P VKLP +D
Sbjct: 1 MVK-AGKRSSVGP----IAAPAAVIPKKTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQM-TRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNIDDEIDKLEKDVKESYGAMPDIPSLAP-EMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAGALX---XXAGGAVR--SNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLER-------RATSANTTPVKPAAAVKLPEND 322
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI) HSP 1 Score: 238 bits (606), Expect = 1.630e-67 Identity = 148/314 (47.13%), Postives = 185/314 (58.92%), Query Frame = 1
Query: 112 KVDRGLQSLMDYGDNMEEFAAIFAHLPSKLTQDLETVAALSEDTHARTQELSRLQAELIERSKAKLRQAGSCPDHIEGLIDLAMLEKVLEKREVVTKGMNKAVDXXXXXXXXLDSCINRVDDEISRLEADVKENYGVVPDYASLAPPEVVPEVSFIASEHCSIADLLAPGAADSDGQNKAAASGTAGKGGKGAGKTVGGSRVVGGPATGVAQEAYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKV---EISFWLCPGCSRDKEEKDRREQAEKLRIAALVRNSAANAVKVAP---VKLPSDD 1035
K D LQSLMDYGDN++EF AI AHLP++L DL+ VA LSE+TH T ELSR QAE++ER+KAK RQ + P+ ++ LID L+K EKR V + +++ V LD+CI +DDEI +LE DVKE+YG +PD SLAP E+ E A A AA A GG GA G + + NEP+YC+CRQVG+GDMIGCDN+DCEHGEWFHY CVGLE V EI FWLCPGCS D K++REQ E+ R ++ N V P VKLP ++
Sbjct: 14 KTDYQLQSLMDYGDNLQEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQM-TRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIDDEIDKLEKDVKESYGAMPDIPSLAP-EMFAEHKKTAXXXXXXXXXXGGLAGPQTRAGVAAYPAAALAGGVGAXXXX---XXXXXXVRG--NDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLER-------RATSTNTTPVKPAAAVKLPENN 313
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO) HSP 1 Score: 88.6 bits (218), Expect = 1.040e-17 Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 757 NPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISF---WLCPGC 912
+PNEP YCIC QV YGDMI CDN++CE GEWFHY+CVGL E F W CP C
Sbjct: 26 DPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGLTP-ETRFKGKWFCPTC 79
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A7J7JZC1_BUGNE (Inhibitor of growth protein 3 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JZC1_BUGNE) HSP 1 Score: 89.4 bits (220), Expect = 1.360e-17 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 751 AYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEKDRR 942
AY+PNEP YC+C QV YG+M+GCDN DC EWFHY CVGL W CP C+ + + RR
Sbjct: 52 AYDPNEPRYCVCNQVSYGEMVGCDNTDCTI-EWFHYGCVGLTSAPKGKWYCPSCTAAMKRRGRR 114
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: Q1RKY8_DROME (IP15341p n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=Q1RKY8_DROME) HSP 1 Score: 87.8 bits (216), Expect = 1.380e-17 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 754 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEK 933
++PNEP YC+C QV YG+MIGCDN DC EWFH+ CVGL W CP C++D+++K
Sbjct: 13 FDPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFACVGLTTKPKGKWFCPKCTQDRKKK 71
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A7S6P9_NEMVE (Inhibitor of growth protein 3 (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S6P9_NEMVE) HSP 1 Score: 87.4 bits (215), Expect = 1.790e-17 Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 754 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEKDRR 942
Y+PNEP YC+C QV YG+M+GCDN+DC EWFHY CVGL W CP CS ++K R
Sbjct: 6 YDPNEPRYCLCNQVSYGEMVGCDNNDCPI-EWFHYGCVGLTDAPKGKWYCPQCSTQIKQKRSR 67
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A9UYR1_MONBE (Inhibitor of growth protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UYR1_MONBE) HSP 1 Score: 90.9 bits (224), Expect = 3.070e-17 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 730 ATGVAQE----AYNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGL-EKVEISFWLCPGC 912
A VAQ+ A +PNEP YCIC QV +G+MIGCDN+DC H EWFHY CVGL EK + S W CP C
Sbjct: 116 AQAVAQKKEEMAIDPNEPRYCICNQVSFGEMIGCDNEDCPH-EWFHYACVGLTEKPKGSKWYCPNC 180
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: B7PV48_IXOSC (Inhibitor of growth protein n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PV48_IXOSC) HSP 1 Score: 89.4 bits (220), Expect = 3.680e-17 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 757 NPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEK 933
+PNEP YC+C QV YG+MIGCDN DC EWFH+TCVGL W CP CS D+++K
Sbjct: 93 DPNEPTYCLCHQVSYGEMIGCDNPDCPI-EWFHFTCVGLTSKPKGKWFCPKCSTDRKKK 150
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: C3YVL7_BRAFL (Inhibitor of growth protein 3 n=4 Tax=Branchiostoma TaxID=7737 RepID=C3YVL7_BRAFL) HSP 1 Score: 86.3 bits (212), Expect = 4.430e-17 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 754 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCS 915
++PNEP YCIC QV YGDM+GCDN+DC EWFHY CVG+ + W CP C+
Sbjct: 5 FDPNEPRYCICNQVSYGDMVGCDNEDCPI-EWFHYGCVGISEPPKGKWYCPQCT 57
BLAST of mRNA_H-paniculata_contig2379.6431.1 vs. uniprot
Match: A0A6B2E6U4_9DIPT (Inhibitor of growth protein 3 (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E6U4_9DIPT) HSP 1 Score: 86.3 bits (212), Expect = 7.770e-17 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 754 YNPNEPLYCICRQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCS 915
Y+PNEP YCIC QV YGDM+ CDN+DC EWFHY CVG+ + W CP C+
Sbjct: 25 YDPNEPRYCICNQVSYGDMVACDNEDCPF-EWFHYPCVGITQSPKGKWYCPQCT 77
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 246.1 |
| Seed ortholog evalue | 4.1e-62 |
| Seed eggNOG ortholog | 2880.D7FVE0 |
| KEGG rclass | RC00002,RC00021,RC00043,RC03180 |
| KEGG ko | ko:K00927,ko:K07561,ko:K11319,ko:K11346,ko:K11379,ko:K19197,ko:K19198 |
| KEGG Reaction | R01512,R10455 |
| KEGG Pathway | ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 |
| KEGG Module | M00001,M00002,M00003,M00165,M00166,M00308,M00552 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | methylated histone binding |
| EggNOG OGs | COG5034@1,KOG1973@2759 |
| Ec32 ortholog description | PHD-type zinc finger and ING domain protein |
| Ec32 ortholog | Ec-14_000760.1 |
| EC | 2.5.1.108,2.7.2.3 |
| COG Functional cat. | B |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03012,ko03036,ko04147 |
| Exons | 7 |
| Model size | 2307 |
| Cds size | 1818 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2379.6431.1 >prot_H-paniculata_contig2379.6431.1 ID=prot_H-paniculata_contig2379.6431.1|Name=mRNA_H-paniculata_contig2379.6431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp
MVKTSGKRSAVTAGLTVMAGQERVVKVDRGLQSLMDYGDNMEEFAAIFAH
LPSKLTQDLETVAALSEDTHARTQELSRLQAELIERSKAKLRQAGSCPDH
IEGLIDLAMLEKVLEKREVVTKGMNKAVDVTKGMYEALDSCINRVDDEIS
RLEADVKENYGVVPDYASLAPPEVVPEVSFIASEHCSIADLLAPGAADSD
GQNKAAASGTAGKGGKGAGKTVGGSRVVGGPATGVAQEAYNPNEPLYCIC
RQVGYGDMIGCDNDDCEHGEWFHYTCVGLEKVEISFWLCPGCSRDKEEKD
RREQAEKLRIAALVRNSAANAVKVAPVKLPSDDDDDDDDDDDDEEQEGEG
APKAEVSTGIGVELGASASLTVSMEKKENTNPVEGPVTGTGTSEQAIKRE
NNQSTSAAAGRDIGEPSRGYNGEGGSGTSEYLGLEYRVADGSAKTNVTPM
RPGADEESGKYVGSHSIREVTAGAGAVGGAMGEMASAAIENAVENVTVAI
NSTNNETAVRDAPPSSGGAAVAGVPAPSASDGTSAIVGVISASVGDAMGR
FVSSDDFSEEAKVKPPAQNEGALASNMRAHHPVAVVSGNTPEAQGVGETE
NVPPM* back to topmRNA from alignment at H-paniculata_contig2379:4890..13399- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2379.6431.1 ID=mRNA_H-paniculata_contig2379.6431.1|Name=mRNA_H-paniculata_contig2379.6431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8510bp|location=Sequence derived from alignment at H-paniculata_contig2379:4890..13399- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTGTGTCTGAACCGCAGCTGAAATAACTTCCAAATATGGTGAAGACTAG
CGGGAAGCGAAGTGCGGTGACCGCTGGTCTGACGGTTATGGCCGGCCAAG
AACGCGTGGTGAAGGTTGACCGAGGTCTACAATCGCTCATGGATTATGGA
GACAATATGGAGGTACCAAAATCTCAATTTGTTGAAAAATTAGAAATTCA
CCTCGCTATTTACTTTTGCTCGATTTTTGTTTAATTCATACTAGAGAAAT
ACTCAGGGTGTCAGGGGAGAGATTTGGGCAATCGTGAGGGGTGCTAATAA
CGATTGGATGCTTGATGATTGGGTTGTGTCTTTTTTTCCCGCTGTGTAAT
CGGACACCCGAATCATGCTGTACTGTACAAATCTTTGAGTGAGAAATCAA
GAAAAGTTGACGTCTCATTCGTGCAGCCTTGTAAGCTGACTTCGCAATTT
TGTTTTCAGTCGGGCATTCAAATCTAATTTTTTGACACTTGGCGCGCGTT
TCTTATACTCAAACTTGTTGAAGCTTCACCTAAACCTAATGTGTTGTAAG
GCGTAGACTTTCAGTTCGCTGGGGGTTTGGTTCCTTGTTGAGTCAATGTT
TTATGTTCCAATCACATGTCGGTGGGCTACTTCAATTTTTAAGGACCGGG
ATCATGGGACTCGCAGTACATGATGAGACCACAATCCAGTCTCCTCCCAT
GATAGCTGTAGATTGCGGTGAGATACTGTGGAAACATAGGCTGAAAAGCC
ACCCTCGAGAGCATCTCTGCGTGTCCAGGAGCTGCTGCGAAAAATGAAAC
CCCATAGGCTTGCTCCCCTGGGGACGGAGGGTAAAGTTTATGGTGGCGAT
AGCTAGCTAGGGTTCGACGTGAACGGGGACATTCGTTTCTTTGGGGTGCA
AGGTGATGCGGCCCACTGCAATGTCACTCTGTTACGGCCTGTTACTGTAT
TATCTGACTACTGTCGTGAAACGATACGAAGAATGTTCTTTTCTGTAGTC
TAGCCTACTGTAGTAGCGTGCTGGTGCTGTGCAAAGATAGGGCTCGTGTT
TCTCGTTTTAGCAGCATAGATGCTGTACTGTAGGTACAATATGCACGGTA
CGTATTGCCTGTTGAAGTTGTGCTGCAGTTTTATGGGAGTGTTTCGTGTG
TCACTGCGACGGCGTCCCATGACTACCGCCGGGGACAACTGCTCACAAAT
ATCTATCCCCAGGGGCAACTCTACGTGCCCAAATATGCCCAGCTTATCTC
CTGTCTCCGCCAGTTCGTGAATGTGGAATTAACAAGTTTCTGTACAGGTC
ACATAACACCACCGAGGCTAGGCGGTGCGGCAGTAAAGTCGGTGCTGTCA
TTAAATAGCTCCGACAGGGTTGATCCCGACAGTATTAATATCGCAGTATT
CGACAAACAAAACAGTAACAGTAGCAGCTTTACACTATTAGTAGGTATGC
TATGTGGGCCCATGCTCGTCCTGGCACGTTTTTATGGGGTGAAAATTGCA
AATTTCAGACAGTACCAAACTCGTCGACATGCACGCAGGAAACGCTTTCG
AGCCGCGGAATTTTGATTGGAGAAAAATACCCGCACGATAGTCGCAGGGC
AACTAACTTAACACTATCGCAATGGTGAGCAAGTTTTACTGGATGCGTTG
CGCTCAATAAACTCTATTTGCCACGGAAGTATCCGATGTGCAAAATCCAA
GTTTGACAGAAATTTTCAGACGCCATCGTTAGGTCGAACACTAAATAACT
TAAGAACATTTCAGCCATTTGATTTGAGTCAGCACACCAACCAAAACCTG
AGGAGATTTGATTTCAGGATTGAATTCTAAAAAAGGTCTCCAGGGCCTCT
TTTTTCTTGTCCGAGCGTCAAAATAAGGTACTTTTCGGCCGTGATTATCC
CCAGGAACTTCTGACCCCCTAATCAGGTAGTAGTGTGGAGTGATTGTTTA
TTATTATTATTATTATTTGGCCGTTACAAAAAAATCCAAATTTTGAAGCG
TTCTCGCTCTACTCTAAAAAATACAACATAACAAGTTCCCGAACATACGA
GAACTACCCACTTTTGCGCCTGAAATCCACCCATCAGCTGTCTAGAACTG
GTTGGGCGCTCTATCGATGAAATGTCTCTGTTAGCATCTATATTTGGCCG
TTACGAAGTTCGGTTTGTAGAGGGTAAAGGCACCGAGCAGGACCCCTGCG
GGGCGCCCCGGGCACGTAGACTCGGCCTATTCTTAATTAGGGAGAACTAT
ATCACTCCTTAGACCAACCACCCACAACTATTTCTCCGCGAAAAGAAAAC
GTACTCTCCGTGTACCCTCTCACTTAGTAGTGCGTGCTTCTGGTCCAAAG
CTTAATCCACCCGGATTGACCACAAGTGCTGAGTAAAGGTATATCTTTCT
TTTCAGATCAGGTCGGGCCTCCTCTTTTGTGCATCCCCATAGGGGTGTCA
TTTTCTTTGGCCGATTCTGTACCCTTTCCTGATCAACCCGGGAACTTTTT
CTGGCGCTGTGATGACGGAAATTTGAAGCCTTCCCTGCACGGGCAATTGG
TTCTATGTTGTGTTCCACGGAGATAACTAAAACCGCTTACTTCCCGAACT
GATTCTGTCTGACCTAGCTGCGTTGGCAAGGTGTGTGTGCATTGGCAGAG
TTAACACCTGACCTAACTGAGGTGGGAAAGCACGTGCTACACCTCCACAT
CCAAGTCTAACGCTAGCGTTAACCCCACCCAAATCCACCGATCCTACTAG
TAATGCAGTGAGCGTGTATGTTTGCATGTATTTGCATGTGTTGGCAGAGC
TTACATCTGGCCTATATGCATTATTGGCGGAGCCCACGCGAGCGAGGCAG
CAGCTCACCTGCGCAGTGCATTTAAACGACCGAAGAGGGCCAAGGATTTT
CTTTTCCTGGCCGTTGCCCCTGCCTAAAAAAAGTTAACTACCTTGTGAGC
GAACAGTAGTTGAACGACACCCTGGTCAAATCAAACTGGTTGGGGCTGAA
GTAACCAGACAACTGTTTCCACCAAATCGTCAAGATAAAAGCAGGAAAGT
ATCGTATAATAATGATGGACTTCCGGGGTGAAAGAGTCAAGGGTTATCCA
CTTCCATTCAAGCTGGACATTGCAGGCGTAGCGCTCCGTGTATATCGAGA
AATATAGTGGCAAGTAGTACCAGGCAGTACATAGCTTGCACAGACCGAAT
ATTTTTTTCTGAGAAAAGGAGGAGCGGCTTCGAAGTTCAAAATGTCAAAA
TAGAGCATGGGAAAATTAGTTTCAATGACAACGTTGTCTTAGACTGATCC
TTACACTTCCTGCTGGCGTTAGCAAAGGGGTCGGCGTGAGGTTGGTAAAA
ACCCCTATCTGTAGTGCGCCTTGTCGTTGGTGGTGGTTAATGCGTGTGAT
CCGGCACCGCTGCCTCGGTTGCGTTTTGTCAAGTCAGTCTGTCGTTCTGT
GCTTGCTCAGGTGTTGATTAATATGAAAATATTTAGGAGCTGGACATTCA
GTAGATGATGACTCTAACAGAAAGGGGGTGTGAGGCGGGGAGGGGCGGAT
GCGACCACGGACCAATATGATATTCTACTTAGATTTCCCCTGGCGGTAGT
TGCAACTGCAACGGACCTCATTCCATACTGCGCTACTACTCCATCCCAAC
ACCCTTTTCTTTCACAGGAGTTTGCAGCCATCTTTGCGCACCTCCCCAGT
AAGCTGACGCAGGATCTGGAGACAGTGGCCGCCCTAAGCGAGGACACGCA
TGCCCGCACGCAAGAGCTAAGCCGTCTTCAGGCAGAGCTTATCGAAAGGT
CTAAGGCTAAACTCAGACAGGCGGGTAGTTGGTAGTTGAATTCTTGCTTA
TGTGACAAGCCCTGAGAATCTTCTGTGAATTCGTTTTATGTCCACTTGTA
CCTCAGAGTCGAATCGTTGTAACAAAAAATTGTTAAGTGTGAAGTACACA
TATCATGTCATGGCATGACATGCCATGTCCAGCGCGCGAGTGGACACGGT
AGATCCAGCGTTGATGACAGTTGATTTAATTTGCCCTCAGATACGATACC
AACTGTCAAGTCAATCGATCAGAGGGTACGTTAGTATCTCATCTGAACTA
ACGGGCGGGTTTGTTGATCAAGTCTCTTGTATGGTGCCATAGGCCGCGGT
TTTTTCTTTTTGATTACCGTTCAATCGAGCCAGTCGTATGACTTCGTATC
TGGTATATATACATAAAATACGACGAAAAAAACCCCGGCAAGGGCTGACG
TCTGGCTGGTTAGTGCAGCGTTACAAATTAGGTCCGTAGTGTTGTCAGCC
GGTCATCCAAATATGCATCTATATTTCCCCCTCGGTCTACAGGCGACAAG
TCCTGATCACATCGAGGGGCTAATAGATCTGGCTATGCTGGAGAAGGTTC
TCGAAAAGCGAGAAGTAGTGACCAAGGGCATGAACAAAGCAGTTGATGTC
ACTAAGGGCATGTACGAGGCGCTGGACAGCTGCATCAATCGCGTTGGTAA
GTGCGGCTGATACCTGTGCAACAGGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGCACGCGCGCATAAATTATTTCTCTAGGAGTGTTCGGG
TGTCTTACGCTTTGAGTAACAGCTGGATGCGCTTCTCACGTAAAATTAGC
AATACTGAAAGAGGCGATGGCATTATCGATTGTTAGGCGGAGGAGCAATG
TCCTGAAGCCCTCGCTAGGTCCGCAAATTTGTTATATCCATACTTGTCTT
GTCTGATTTCTTGTTGTGAGTGACTTGAGCATTCCACTCGAAAACTCCCC
GACAGCTCGTCAAGGAGGCATGTTCGATTCATCACCACCAGGCGTATTTT
ACAAACACGCCCAATTTAAGGCATCCCCAAAGATGCGGTGAACAACATGA
AATACCATCGTAGAGTCCGTGTTGATATCAGAAGATTTTAATATGCAGGT
TGTGGAAAATGCTTGCTCTGGCAAGAGTCTCTGTTCCTATTGCCTTCTGA
CCGATTCGTGTCGTTATGAATCGACAGACGACGAAATCAGTAGACTGGAG
GCAGATGTAAAGGAGAACTATGGCGTCGTGCCAGACTATGCTTCCTTAGC
ACCACCGGAGGTTGTCCCTGAGGTAAGTTTTATTGCAAGCGAACACTGTA
GTATAGTATCTATCTATCGTCATTGTTTTTTCGCGTTTTGTAAAGTGTTG
ACCGCAGCGCACTTCGTTTCGTAGTACCTTTGCACTCTTGAAAAGGAAGC
GCTGCCTCTTTCTCGCCCTGTCAACAATGCTGGGTACTGATTAGTTGCGT
CTGTAGGGAACTGTAGGAACACAAGTTCACAGGTTGGTTATAATCTACAC
TAATTGCAAGTGTTTTTGGTTTTGACCAACTCGGGCCCCTTTCTTTCAGG
TTCGAACACATGCACCCCCCGCACGAATACGAATAATTGGCGTATTCGCC
ACGAAAAGTCAAGAGTATACGCCTAAATTTCAGAATGAGCTCGTGAATTA
TATTTGCCCCGGGCCATTCACGACTGCTAATAATACTCGTAAATCGAATG
GACAGGGGTGGGTACTTTATTCTATGTGTCCGCTCATTCTGAAAATTAGG
CGACTACTTTTTAATTTGACTGCATCATTTGTTACTGCTGACTCGTGGGG
CTACTAGTGCATGTGTTCAATCCTCTTCTTTTTTGTTCTCTCTGTCACAC
ACACACACGATTTGTGACGTCTTGAGCATCTTAACGGACGGCAACGTTCC
GTGATAGAACTCGTTCTCGTACCGTTGTACTTGTCGAATGATTGATGACT
GTCACGGGATGTTTATGATACAGTAGAGTTCACCCGAGGCATGCACACCG
AACCAATCTAACTTCTCCATTGAATCTAAAAACATAGCTCACCATGAAAT
GCCTCTTGTGCCTCGAAAAGCAGGCTCGATCCGCCTACTATAGTGTGCCC
GGCTTAGCTTTTTCTCCCCCTGTTCTGCTCTACACGGTTGTAATGTACTG
TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTG
TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTATTTCCGGAAC
ATGAAGGCTGACTTGCTCGCGCCCGGGGCGGCTGACTCAGACGGGCAAAA
TAAAGCGGCGGCTAGCGGAACAGCGGGCAAGGGAGGAAAGGGTGCTGGAA
AGACCGTGGGAGGGTCAAGAGTTGTGGGTGGGCCAGCGACAGGGGTTGCT
CAAGAGGCCTACAATCCAAACGAACCTCTTTATTGTATTTGCCGGCAGGT
TGGATACGGGGATATGGTGAGTGAGCATGGTCGATTGGCGAAGTGTTTTT
CGCGATTTCTTAATCTGCGTAGGCCATGGAACGAACAGTAGATAATAGGC
AGACAGGCTTTCATACATGCATGTGCTATTTCAACTATAAATATTAGGTT
GGCGTATTCGCAGGGGATTGTTGGGCTTTGAGTGGTGTTTTAGCTCCCCC
CAAGTTGCTGAACGTTCTGGAAGTATATTATTTTTTTCCATGTGCTAATG
TCGGTGGAGGTAGCTGTTGCGCGCAGCGCCTGCTGGTGAATAACCGCCTT
CCGGCTCCTTCTCCCGTTGGTGCTTCTTTACATGTCCACCTACACCCGCG
TCTTGAACTGTGTGCCTGTTTACTGCTGGTGTGGCGACATTTTATTGTTC
CCAGATCGGTTGTGACAACGACGACTGTGAGCATGGAGAATGGTTCCATT
ACACGTGTGTCGGACTGGAGAAGGTGGTGAGTGCGTGTCTAGTTGGGCGG
GCTAATGGAGGAAATCAGCCGTTCATTCTCTGTTCTTGCCTGGCACCGTT
TGTTAAGATTACAGTTGTACACAGCTTCCCTTGGCCAAAGATGAAGAAAT
CCCCGTCGATCGATTCCGGCTTGGCGTCATTGTTCCCTAGTCCGCCTGAG
CAAGAAGTGGGTCAGTTGTTGTCCTAATATGTGGCGCTCCGACGCCGAAT
AGAATTCCTGCAATACCCCCATGATTAGATGAAGTCATGCATATATATAT
TTCCTGTGTATGTGGGCAATGCCGTTCTTGTGCAGGAAATATCTTTCTGG
CTCTGTCCCGGGTGCTCGCGAGACAAGGAGGAAAAGGACCGCCGGGAGCA
AGCGGAAAAGCTGAGAATTGCCGCTCTGGTGCGAAACTCCGCCGCGAACG
CGGTTAAGGTAGCCCCCGTAAAGTTGCCCTCGGACGATGACGATGATGAC
GATGATGACGACGATGATGAAGAACAGGAGGGAGAGGGCGCTCCGAAGGC
TGAGGTCAGCACTGGTATTGGTGTTGAGCTTGGTGCCAGTGCTTCTCTCA
CTGTTTCGATGGAGAAAAAGGAAAACACCAACCCCGTCGAAGGTCCTGTC
ACTGGGACTGGCACTTCGGAACAGGCCATCAAAAGGGAAAATAATCAGAG
CACGTCAGCTGCGGCGGGAAGGGACATTGGGGAACCATCCCGTGGATACA
ACGGCGAGGGCGGATCAGGGACAAGTGAGTATCTGGGACTAGAGTACCGT
GTTGCCGATGGTAGCGCGAAGACTAACGTTACTCCGATGCGGCCAGGCGC
TGACGAGGAGTCGGGGAAGTATGTGGGAAGCCATTCCATTCGGGAAGTGA
CAGCCGGGGCGGGCGCGGTTGGAGGGGCTATGGGAGAGATGGCTAGCGCG
GCGATAGAAAATGCCGTGGAGAATGTGACGGTGGCTATAAACTCTACGAA
TAACGAGACGGCTGTCCGTGATGCTCCGCCTTCGTCCGGTGGTGCCGCTG
TTGCGGGAGTACCTGCTCCGAGTGCTTCTGATGGTACCAGTGCTATTGTT
GGTGTGATTTCCGCTAGTGTTGGAGATGCAATGGGTCGTTTTGTCAGTTC
GGATGATTTCAGCGAAGAAGCTAAAGTCAAACCACCCGCACAAAACGAGG
GCGCTTTGGCTTCTAACATGCGCGCTCATCACCCGGTAGCCGTTGTCAGT
GGCAACACACCTGAAGCACAGGGTGTGGGAGAGACGGAAAATGTGCCCCC
CATGTAGATCGCCATCATTTCACTTTCGGGGACTGGTGGGCACGCGTCAC
CAACGCAGCTGGTTGTTCTCCCTAGAAATGTGGTTTAGTGTACCGCACCA
TCAATACTATTTTACGTCCACCCGATTTGTGCACTAGGAGGCGGTGGGCA
GTTTATGGCGTGACACAGAGAGAGACGTTCAGCGTTCCAAGTGGAAATAC
AGGATTGGCCAAGACTAAGTTTTGACAGGATAAGACGGAGTTTATACTTG
ATCAATGTGTTTAATCATTTCATGTCACATCACGTGACGGGATTCAACAG
GATTCCAAACGAAGGGGAAGGTAACTCTCGGGAACGTAGCCAAACTACTT
GAAAGAGATACGTTACAAGAGAAGATAGGCGAGAAATGTTTTCTAGTGAT
GTAATAAAGAATTTGTGATGAGGCGTCACCTCAAACAAGGTGAATACCCT
ATCTACTGCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2379:4890..13399- >mRNA_H-paniculata_contig2379.6431.1 ID=mRNA_H-paniculata_contig2379.6431.1|Name=mRNA_H-paniculata_contig2379.6431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at H-paniculata_contig2379:4890..13399- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGAAGACTAGCGGGAAGCGAAGTGCGGTGACCGCTGGTCTGACGGT
TATGGCCGGCCAAGAACGCGTGGTGAAGGTTGACCGAGGTCTACAATCGC
TCATGGATTATGGAGACAATATGGAGATGGTGAAGACTAGCGGGAAGCGA
AGTGCGGTGACCGCTGGTCTGACGGTTATGGCCGGCCAAGAACGCGTGGT
GAAGGTTGACCGAGGTCTACAATCGCTCATGGATTATGGAGACAATATGG
AGGAGTTTGCAGCCATCTTTGCGCACCTCCCCAGTAAGCTGACGCAGGAT
CTGGAGACAGTGGCCGCCCTAAGCGAGGACACGCATGCCCGCACGCAAGA
GCTAAGCCGTCTTCAGGCAGAGCTTATCGAAAGGTCTAAGGCTAAACTCA
GACAGGCGGGTAGTTGGAGTTTGCAGCCATCTTTGCGCACCTCCCCAGTA
AGCTGACGCAGGATCTGGAGACAGTGGCCGCCCTAAGCGAGGACACGCAT
GCCCGCACGCAAGAGCTAAGCCGTCTTCAGGCAGAGCTTATCGAAAGGTC
TAAGGCTAAACTCAGACAGGCGGGTAGTTGTCCTGATCACATCGAGGGGC
TAATAGATCTGGCTATGCTGGAGAAGGTTCTCGAAAAGCGAGAAGTAGTG
ACCAAGGGCATGAACAAAGCAGTTGATGTCACTAAGGGCATGTACGAGGC
GCTGGACAGCTGCATCAATCGCGTTGTCCTGATCACATCGAGGGGCTAAT
AGATCTGGCTATGCTGGAGAAGGTTCTCGAAAAGCGAGAAGTAGTGACCA
AGGGCATGAACAAAGCAGTTGATGTCACTAAGGGCATGTACGAGGCGCTG
GACAGCTGCATCAATCGCGTTGACGACGAAATCAGTAGACTGGAGGCAGA
TGTAAAGGAGAACTATGGCGTCGTGCCAGACTATGCTTCCTTAGCACCAC
CGGAGGTTGTCCCTGAGGTAAGTTTTATTGCAAGCGAACACTGTAGTATA
ACGACGAAATCAGTAGACTGGAGGCAGATGTAAAGGAGAACTATGGCGTC
GTGCCAGACTATGCTTCCTTAGCACCACCGGAGGTTGTCCCTGAGGTAAG
TTTTATTGCAAGCGAACACTGTAGTATAGCTGACTTGCTCGCGCCCGGGG
CGGCTGACTCAGACGGGCAAAATAAAGCGGCGGCTAGCGGAACAGCGGGC
AAGGGAGGAAAGGGTGCTGGAAAGACCGTGGGAGGGTCAAGAGTTGTGGG
TGGGCCAGCGACAGGGGTTGCTCAAGAGGCCTACAATCCAAACGAACCTC
TTTATTGTATTTGCCGGCAGGTTGGATACGGGGATATGGCTGACTTGCTC
GCGCCCGGGGCGGCTGACTCAGACGGGCAAAATAAAGCGGCGGCTAGCGG
AACAGCGGGCAAGGGAGGAAAGGGTGCTGGAAAGACCGTGGGAGGGTCAA
GAGTTGTGGGTGGGCCAGCGACAGGGGTTGCTCAAGAGGCCTACAATCCA
AACGAACCTCTTTATTGTATTTGCCGGCAGGTTGGATACGGGGATATGAT
CGGTTGTGACAACGACGACTGTGAGCATGGAGAATGGTTCCATTACACGT
GTGTCGGACTGGAGAAGGTGATCGGTTGTGACAACGACGACTGTGAGCAT
GGAGAATGGTTCCATTACACGTGTGTCGGACTGGAGAAGGTGGAAATATC
TTTCTGGCTCTGTCCCGGGTGCTCGCGAGACAAGGAGGAAAAGGACCGCC
GGGAGCAAGCGGAAAAGCTGAGAATTGCCGCTCTGGTGCGAAACTCCGCC
GCGAACGCGGTTAAGGTAGCCCCCGTAAAGTTGCCCTCGGACGATGACGA
TGATGACGATGATGACGACGATGATGAAGAACAGGAGGGAGAGGGCGCTC
CGAAGGCTGAGGTCAGCACTGGTATTGGTGTTGAGCTTGGTGCCAGTGCT
TCTCTCACTGTTTCGATGGAGAAAAAGGAAAACACCAACCCCGTCGAAGG
TCCTGTCACTGGGACTGGCACTTCGGAACAGGCCATCAAAAGGGAAAATA
ATCAGAGCACGTCAGCTGCGGCGGGAAGGGACATTGGGGAACCATCCCGT
GGATACAACGGCGAGGGCGGATCAGGGACAAGTGAGTATCTGGGACTAGA
GTACCGTGTTGCCGATGGTAGCGCGAAGACTAACGTTACTCCGATGCGGC
CAGGCGCTGACGAGGAGTCGGGGAAGTATGTGGGAAGCCATTCCATTCGG
GAAGTGACAGCCGGGGCGGGCGCGGTTGGAGGGGCTATGGGAGAGATGGC
TAGCGCGGCGATAGAAAATGCCGTGGAGAATGTGACGGTGGCTATAAACT
CTACGAATAACGAGACGGCTGTCCGTGATGCTCCGCCTTCGTCCGGTGGT
GCCGCTGTTGCGGGAGTACCTGCTCCGAGTGCTTCTGATGGTACCAGTGC
TATTGTTGGTGTGATTTCCGCTAGTGTTGGAGATGCAATGGGTCGTTTTG
TCAGTTCGGATGATTTCAGCGAAGAAGCTAAAGTCAAACCACCCGCACAA
AACGAGGGCGCTTTGGCTTCTAACATGCGCGCTCATCACCCGGTAGCCGT
TGTCAGTGGCAACACACCTGAAGCACAGGGTGTGGGAGAGACGGAAAATG
TGCCCCCCATGTAGGAAATATCTTTCTGGCTCTGTCCCGGGTGCTCGCGA
GACAAGGAGGAAAAGGACCGCCGGGAGCAAGCGGAAAAGCTGAGAATTGC
CGCTCTGGTGCGAAACTCCGCCGCGAACGCGGTTAAGGTAGCCCCCGTAA
AGTTGCCCTCGGACGATGACGATGATGACGATGATGACGACGATGATGAA
GAACAGGAGGGAGAGGGCGCTCCGAAGGCTGAGGTCAGCACTGGTATTGG
TGTTGAGCTTGGTGCCAGTGCTTCTCTCACTGTTTCGATGGAGAAAAAGG
AAAACACCAACCCCGTCGAAGGTCCTGTCACTGGGACTGGCACTTCGGAA
CAGGCCATCAAAAGGGAAAATAATCAGAGCACGTCAGCTGCGGCGGGAAG
GGACATTGGGGAACCATCCCGTGGATACAACGGCGAGGGCGGATCAGGGA
CAAGTGAGTATCTGGGACTAGAGTACCGTGTTGCCGATGGTAGCGCGAAG
ACTAACGTTACTCCGATGCGGCCAGGCGCTGACGAGGAGTCGGGGAAGTA
TGTGGGAAGCCATTCCATTCGGGAAGTGACAGCCGGGGCGGGCGCGGTTG
GAGGGGCTATGGGAGAGATGGCTAGCGCGGCGATAGAAAATGCCGTGGAG
AATGTGACGGTGGCTATAAACTCTACGAATAACGAGACGGCTGTCCGTGA
TGCTCCGCCTTCGTCCGGTGGTGCCGCTGTTGCGGGAGTACCTGCTCCGA
GTGCTTCTGATGGTACCAGTGCTATTGTTGGTGTGATTTCCGCTAGTGTT
GGAGATGCAATGGGTCGTTTTGTCAGTTCGGATGATTTCAGCGAAGAAGC
TAAAGTCAAACCACCCGCACAAAACGAGGGCGCTTTGGCTTCTAACATGC
GCGCTCATCACCCGGTAGCCGTTGTCAGTGGCAACACACCTGAAGCACAG
GGTGTGGGAGAGACGGAAAATGTGCCCCCCATGTAG back to top
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