prot_H-paniculata_contig2378.6428.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2378.6428.1
Unique Nameprot_H-paniculata_contig2378.6428.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length342
Homology
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A6H5JPD9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD9_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 1.600e-123
Identity = 188/316 (59.49%), Postives = 239/316 (75.63%), Query Frame = 0
Query:   33 AEEGHPSIGQVG------PSGAIQLQTGGVLEEP---AARRNVR---MNMMEDGARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLMQNSGCHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETAGVENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDMEEEKTPESGPLP 336
            + EG+   G++G       +G+ + +T      P   A  RNVR   M++ +DG RG++ASRL LLLLT+VN+PLI AGVV+L LHWQD DVC+   R++W+WWAL+SVVRM LITPVV+VRW++EGQ + +RN A+D LS+N+RNSLDIVGL+WFVIG+MWL+QN GC +   SPIY+LCLVYIIITYIHI LPCILLMLLVPV        IRL+GMLQGPQR KGARQ+EIEKL ++K++E   +E++ C IC+V+Y+ +D+LRKLPC HAFH  CVD+WL VNASCPNCRARCFE   +  EEK  +  P P
Sbjct:  111 SNEGNSGSGRIGLGELIQQAGSDEAETQPATRRPVNRATNRNVRHVWMHIADDGVRGLSASRLSLLLLTLVNLPLIAAGVVILILHWQDTDVCDVDHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRLKGARQDEIEKLPVVKYREVQDMEDDACAICIVDYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEDGE-GEEKIADDAPAP 425          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A7S2V5V5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V5_9STRA)

HSP 1 Score: 238 bits (608), Expect = 9.020e-73
Identity = 126/271 (46.49%), Postives = 168/271 (61.99%), Query Frame = 0
Query:   64 RNVRMNMMEDGARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLM-QNSGCHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQE-TAGVENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDMEEEKTPES 332
            R VRMN++    R +N  +L +L+  +VN+P I+A + VL+LHW D   C+   RQRWRWWALIS VRMA+ T V+VV +     +   R++    L +N+RN +D +GLIWFV+GNMWL  Q+  C +   SPIY+LC+  ++ITYIHI LPC++                R+L  LQ P R KGA Q  I++LE +KFQ     VE ETCPICL ++   D LR LPC H FH  CVD WLL+NASCPNCR+   E G + E+    +S
Sbjct:   79 RRVRMNVLGTSMREVNNRKLVVLVTLLVNIPQIVAAIAVLSLHWGDTFACDPERRQRWRWWALISTVRMAIYTVVMVVLYFFT--LHRPRDSREVALLSNLRNGVDALGLIWFVVGNMWLFGQSESCDNPGSSPIYQLCVAMLLITYIHICLPCLIXXXXXXXXXXXXXXXXRVLSRLQDPMRGKGANQAAIDRLEAIKFQPGVTEVEEETCPICLTDFVEGDGLRLLPCDHCFHQSCVDEWLLLNASCPNCRSTILEEGEEDEDSLEDDS 347          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A7S3XQH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH4_HETAK)

HSP 1 Score: 229 bits (585), Expect = 2.440e-70
Identity = 120/283 (42.40%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   54 GGVLEEPAAR-RNVRMNMMEDGARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLM-QNSGCHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQ-ETAGVENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDMEEEKTPESG 333
            GG    PA + + VRMN++++G R +N  RL + L  +VN+P ++A  VVL+LHW DD VC++  R+RW+WWA ++  R+A+ T ++V  + +   +   R+A    + +N RN +D +GLIWFV+GNMWL  Q   C  A  SP+Y+LC+  +++TY+HI LPC++                R+L  LQ P R KGA Q  I+KL+++K++ +   +E  TCPICL EY+  ++LR LPC H+FH  CVD WLLVNA+CPNCR    +   + EE K  E G
Sbjct:    1 GGGGGSPAQQNQRVRMNVLQNGIREVNNRRLVVFLTLVVNLPQLVAAAVVLSLHWDDDAVCDADHRERWKWWAAVAAARLAVYTGLLVALYLV--LLRRPRDAREVIVLSNARNGVDALGLIWFVVGNMWLFGQTESCDGAGASPVYQLCVAMLLVTYLHICLPCLIXXXXXXXXXXXXXXXXRVLARLQDPMRGKGANQAAIDKLKIIKYRPDLPEIEEPTCPICLNEYENGEELRSLPCKHSFHKKCVDEWLLVNATCPNCRTTILDEEQE-EEAKLGEEG 280          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A7S2DZB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZB6_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.390e-64
Identity = 110/281 (39.15%), Postives = 173/281 (61.57%), Query Frame = 0
Query:   64 RNVRMNMMEDGARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQV-DGERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLMQNSG------CHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETAGVENE-----TCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDMEEEKTPES 332
            +NVR+N++ D  R +++SR+ +  L + N P I+A +VVL+LHW DD VC++  R +WR WALI+ +RM L    + +   +   V   +R   L  + +N+RN LD  GL+WF++GNMWL   S       C   + SPIY LCL  ++  YIHI LPCI+ +L++PV+CF     I +L  ++ P+  KGA +  I+KL L+KF++ + VE+      +CPICL+++  DD++R LPC H FH  C+  WL +N++CP+CR    +     +E+ + E+
Sbjct:   60 QNVRVNVLNDSLREVSSSRIAVSALILFNFPQIVAAIVVLSLHWPDDSVCDAEHRLKWRVWALIATIRMVLHMVTIFLIIGVSRMVTQQDRQTRLLMILHNLRNLLDAAGLVWFLVGNMWLFGGSDEKVTTVCVRPTQSPIYNLCLAMVVFNYIHICLPCIVAILMIPVLCFXXXXXIHMLRWMRDPEEGKGASEAAIKKLPLVKFRDLSDVESTMSSQLSCPICLMDFGPDDEVRILPCKHYFHDQCIGEWLGMNSTCPSCRKNILKDVPSADEKSSNET 340          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: D7FY42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY42_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 6.500e-57
Identity = 86/121 (71.07%), Postives = 108/121 (89.26%), Query Frame = 0
Query:   68 MNMMEDGARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLMQNSG 188
            M++ +DG RGMNASRLGLLLLT+VN+PLI AGVV+LTLHWQD DVC+   R++W+WWAL+SVVRM LITPVV+VRW++EGQ + +RN A+D LS+N+RNSLDIVGL+WFVIG+MWL+QN G
Sbjct:    1 MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG 121          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A0P1ASH5_PLAHL (Transmembrane protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1ASH5_PLAHL)

HSP 1 Score: 195 bits (496), Expect = 2.270e-56
Identity = 123/307 (40.07%), Postives = 173/307 (56.35%), Query Frame = 0
Query:   45 PSGAIQLQTGGVLEEPAA---RRNVRMNMMEDG---ARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAALD------TLSNNIRNSLDIVGLIWFVIGNMWLMQNSG-CHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETA-GVENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDMEEEKTPESGPLPR 337
            PS A  L T GV   PAA      VR+N++      AR    SRL +  L++VNVP I+A +V+L LHWQ + +C      R + W L+  + +   T  +++ W L        N+A+       T  + ++  LD+ GL WF++GNMW++ +   C D  GS +Y+L L  I+I+Y  I LPC+LL+ L+PV+CFCLPCVIRLL  LQ P R KGA +E I++LE   +  +    E+  C ICL +Y+    LR LPC+H FH  CVD WLLVN++CP CR   F++        T E   L R
Sbjct:   34 PSRARLLATAGVGRGPAAPDEAHAVRLNVLNSSVQEARDARNSRLIMWALSIVNVPQIVAAIVLLVLHWQSETLC-----YRIQVWVLLHTIHL---TFTLLLEWTLYFLNGATSNSAIRLREQYMTFLSQLKYGLDLAGLFWFLVGNMWVISDGARCDD--GSAMYQLALWMIVISYAKIFLPCLLLLALLPVLCFCLPCVIRLLSRLQDPMRGKGATKEIIDQLETKAYVASMFPSEDACCCICLNDYEPSQSLRVLPCAHHFHKECVDEWLLVNSTCPTCRKSIFDVAGSGNATATSEEEMLGR 330          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: K3WVV2_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVV2_GLOUD)

HSP 1 Score: 192 bits (489), Expect = 2.180e-55
Identity = 119/294 (40.48%), Postives = 168/294 (57.14%), Query Frame = 0
Query:   38 PSIGQVGPSGAIQLQTGGVLEEPAARRN---VRMNMMEDG---ARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAA-----LDTLSNNIRNSLDIVGLIWFVIGNMWLMQNSG-CHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETA-GVENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCF 318
            P  G   P    +L    ++ +PA       VRMN++      AR    +RL + ++T+VN+P IIA  +++ L W+D+ +C      R + W L+  + ++L   +  V + L G  DG  +         T  + ++  LD+ GL WF++GNMW++ +   C D  GS +Y L L  III+Y  I LPC+LL+ L+PVICFCLPCVIRLL  LQ P R KGA ++ I +L   KFQ T    E+ +C ICL EY+   DLR LPCSH FH  CVD WL+VN++CP CR   F
Sbjct:   28 PGSGSSSPESRTRL----LVRDPALNEEAHAVRMNVLNSSVQEARDARNTRLIMWVITLVNLPQIIAAAIIMGLKWKDETLC-----YRIQIWVLVHTIHLSLTLSLEWVLYYLNG--DGSNSTIRLREQYMTYISQLKYGLDLAGLFWFLVGNMWVISDGARCDD--GSMMYHLALWMIIISYAKIFLPCLLLLALLPVICFCLPCVIRLLSRLQDPMRGKGATKDVINQLTTQKFQPTQFAPEDSSCCICLNEYEPLQDLRVLPCSHHFHKECVDEWLMVNSTCPTCRTSIF 308          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A6S8S1Z2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S1Z2_9STRA)

HSP 1 Score: 191 bits (486), Expect = 4.620e-55
Identity = 106/250 (42.40%), Postives = 146/250 (58.40%), Query Frame = 0
Query:   90 MVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQV----DGERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLM------QNSG-CHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETAGV---ENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDME 325
            +VN+P IIA +VV   ++ ++ VC    R++WR W ++  +R+   T V   R +L        + E    L  L+ N RNSLD + LIWFV+GNMWL+       +SG CHDA  SP+Y   +  ++I Y  I LPC+  + +VPV CFCLPCVIRLL  L  PQ  +GA + +++KL    F     +   E   CP+C+ +Y+ +D LR LPCSH FH  CVD WL VNA+CP CR   F   SD+E
Sbjct:   59 LVNLPQIIAVIVVFA-YFNENKVCSVTARRQWRAWGIVHALRLTAGTLVSAGRARLAATAGPPPEPEGRRRLRALAANARNSLDALALIWFVVGNMWLLGSVPSTTSSGVCHDAGRSPVYVTDVAMLVIQYAQICLPCLFAVAMVPVFCFCLPCVIRLLAALHDPQHGRGATRRDLDKLPTCPFSADLDLLKGEEPCCPVCICDYEENDRLRVLPCSHVFHADCVDQWLAVNATCPLCRKSIFVPDSDVE 307          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: A0A5D6XIF7_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIF7_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.660e-55
Identity = 114/272 (41.91%), Postives = 159/272 (58.46%), Query Frame = 0
Query:   56 VLEEPAARRNVRMNMMEDG---ARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGE----RNAALDTLSNNIRNSLDIVGLIWFVIGNMWLMQNSG-CHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETA-GVENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCF 318
            +  EP     VR+N++      AR    +RL + LLT+VN P ++A  VVL L W+ + +C      R + W L+  V++AL+  +    + L G         R   +  + N ++ +LD+ GL WF++GNMW++ +   C D  GS  Y L L  III+Y  I LPC+LL+ L+PVICFCLPCVIRLL  LQ P R KGA +E I +L+  KFQ      E+ +C ICL +Y+   +LR LPC+H FH  CVD WLLVN++CP CR   F
Sbjct:   17 LAREPPEAHAVRLNVLNSSVAEARDARNTRLVMWLLTLVNAPQVVAAAVVLALQWRAETLC-----YRIQVWVLVHAVQLALVLALEWTLYVLNGDASDRVIRWREHYVGYV-NQLKYALDLAGLFWFLVGNMWVISDGARCDD--GSATYHLALWMIIISYAKIFLPCLLLLALLPVICFCLPCVIRLLSRLQDPMRGKGATKEVINQLQTQKFQPAQFAPEDSSCCICLNDYELLQELRVLPCAHHFHKDCVDEWLLVNSTCPTCRTSIF 280          
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Match: W2LK28_PHYPR (RING-type domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2LK28_PHYPR)

HSP 1 Score: 191 bits (485), Expect = 9.580e-55
Identity = 122/318 (38.36%), Postives = 174/318 (54.72%), Query Frame = 0
Query:   36 GHPSIGQVGPSGAIQLQTGGVLEEPAA---RRNVRMNMMEDG---ARGMNASRLGLLLLTMVNVPLIIAGVVVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVDGERNAALDTLS------NNIRNSLDIVGLIWFVIGNMWLMQNSG-CHDASGSPIYKLCLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGARQEEIEKLELLKFQETAGV---ENETCPICLVEYKTDDDLRKLPCSHAFHPHCVDNWLLVNASCPNCRARCFELGSDMEEEKTPESGPLPR 337
            G  S     PS A  L T GV   PAA      VR+N++      AR    SRL +  +++VN+P I+  V++L LHWQ + +C      R + W L+  + + L    +++ W L        N A+          + ++  LD+ GL WF++GNMW++ +   C D  GS +Y+L L  I+I+Y  I LPC+LL+ L+P++CFCLPCVIRLL  LQ P R KGA +E I++LE   +  TA +   E+  C ICL +Y+    LR LPC+H FH  CVD WLLVN++CP CR   F+  +      T E   L R
Sbjct:   24 GPSSSSLTSPSRARLLATAGVGSGPAAPDEAHAVRLNVLNSSVQEARDARNSRLIMWAISLVNLPQIVVAVIILALHWQGETLC-----YRIQVWVLLHTIHLTL---TLLLEWTLYYLNGVRSNTAIRLREQYMAPLSQLKYGLDLAGLFWFLVGNMWVISDGARCDD--GSTMYQLALWMIVISYAKIFLPCLLLLALLPILCFCLPCVIRLLSRLQDPMRGKGATKEMIDQLETKTY--TANMFPPEDACCCICLNDYEASQSLRVLPCAHHFHKDCVDEWLLVNSTCPTCRKSIFDTANSGGATTTTEEDILRR 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2378.6428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPD9_9PHAE1.600e-12359.49RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2V5V5_9STRA9.020e-7346.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQH4_HETAK2.440e-7042.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DZB6_9STRA2.390e-6439.15Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D7FY42_ECTSI6.500e-5771.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0P1ASH5_PLAHL2.270e-5640.07Transmembrane protein n=3 Tax=Peronosporaceae TaxI... [more]
K3WVV2_GLOUD2.180e-5540.48RING-type domain-containing protein n=1 Tax=Globis... [more]
A0A6S8S1Z2_9STRA4.620e-5542.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5D6XIF7_9STRA4.660e-5541.91RING-type domain-containing protein n=1 Tax=Pythiu... [more]
W2LK28_PHYPR9.580e-5538.36RING-type domain-containing protein n=12 Tax=Phyto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 273..313
e-value: 3.6E-5
score: 33.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 272..314
e-value: 3.7E-13
score: 49.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 273..314
score: 12.342
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 239..318
e-value: 4.9E-20
score: 73.0
NoneNo IPR availablePANTHERPTHR46225FAMILY NOT NAMEDcoord: 78..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 238..341
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..184
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 253..319
NoneNo IPR availableTMHMMTMhelixcoord: 203..237
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 164..183
NoneNo IPR availableTMHMMTMhelixcoord: 84..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2378contigH-paniculata_contig2378:4444..19142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2378.6428.1mRNA_H-paniculata_contig2378.6428.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2378 3535..21416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2378.6428.1 ID=prot_H-paniculata_contig2378.6428.1|Name=mRNA_H-paniculata_contig2378.6428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
MRTSSSGSMNDNRARLPPQRENHQAGSGPGQAAEEGHPSIGQVGPSGAIQ
LQTGGVLEEPAARRNVRMNMMEDGARGMNASRLGLLLLTMVNVPLIIAGV
VVLTLHWQDDDVCESRDRQRWRWWALISVVRMALITPVVVVRWKLEGQVD
GERNAALDTLSNNIRNSLDIVGLIWFVIGNMWLMQNSGCHDASGSPIYKL
CLVYIIITYIHIALPCILLMLLVPVICFCLPCVIRLLGMLQGPQRTKGAR
QEEIEKLELLKFQETAGVENETCPICLVEYKTDDDLRKLPCSHAFHPHCV
DNWLLVNASCPNCRARCFELGSDMEEEKTPESGPLPRDSLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD