prot_H-paniculata_contig23748.6421.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23748.6421.1
Unique Nameprot_H-paniculata_contig23748.6421.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A6H5L357_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L357_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.970e-19
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    2 VFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            VFYTTPLKALSNQKF DFRRQFGEDKVGLLTGDSSFNRDAQV
Sbjct:   84 VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQV 125          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 4.530e-19
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    2 VFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            VFYTTPLKALSNQKF DFRRQFGEDKVGLLTGDSSFNRDAQV
Sbjct:  426 VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQV 467          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.860e-17
Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            RVFYTTPLKALSNQKFSDFRR+FG ++VGLLTGDSS+NR+AQV
Sbjct:  167 RVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQV 209          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A359BHZ1_9CYAN (DEAD/DEAH box helicase n=2 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A359BHZ1_9CYAN)

HSP 1 Score: 80.1 bits (196), Expect = 2.310e-16
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            R+FYTTPLKALSNQKF+DF  ++G DKVGLLTGDSSFNRDAQ+
Sbjct:   52 RIFYTTPLKALSNQKFNDFSEKYGADKVGLLTGDSSFNRDAQI 94          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: K2EWY9_9BACT (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=K2EWY9_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 8.060e-16
Identity = 33/43 (76.74%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            R+FYTTPLKALSNQKF+DF++ +GE+KVGLLTGD+S NRDAQ+
Sbjct:   61 RIFYTTPLKALSNQKFNDFKKSYGENKVGLLTGDTSINRDAQI 103          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: UPI00194EC3C3 (DEAD/DEAH box helicase n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00194EC3C3)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-15
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            RVFYTTPLKALSNQKF DFR+QFGE+ VGLLTGD+S+NR+A V
Sbjct:   69 RVFYTTPLKALSNQKFRDFRQQFGEENVGLLTGDASYNREATV 111          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A7S4DB23_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB23_HETAK)

HSP 1 Score: 74.3 bits (181), Expect = 1.180e-15
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            RVFYT+PLKALSNQK+ DFRRQFG ++ GLLTGD+S NR AQV
Sbjct:   44 RVFYTSPLKALSNQKYQDFRRQFGAERAGLLTGDTSINRGAQV 86          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A2C9VWX3_MANES (Uncharacterized protein n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9VWX3_MANES)

HSP 1 Score: 77.8 bits (190), Expect = 1.500e-15
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            R+FYTTPLKALSNQKF DFR  FGED VGLLTGDS+ N+DAQV
Sbjct:  206 RIFYTTPLKALSNQKFRDFRETFGEDNVGLLTGDSAVNKDAQV 248          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A073CD51_PLAAG (Uncharacterized protein n=1 Tax=Planktothrix agardhii NIVA-CYA 126/8 TaxID=388467 RepID=A0A073CD51_PLAAG)

HSP 1 Score: 77.8 bits (190), Expect = 1.500e-15
Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            RVFYTTPLKALSNQKF DFR QFG DKVGLLTGD S NRDA V
Sbjct:   93 RVFYTTPLKALSNQKFRDFREQFGADKVGLLTGDISVNRDAAV 135          
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Match: A0A8J5G814_ZINOF (Helicase ATP-binding domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5G814_ZINOF)

HSP 1 Score: 72.4 bits (176), Expect = 1.790e-15
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQV 43
            R+FYTTPLKALSNQKF DFRR FG++ VGLLTGDS+ NR+A +
Sbjct:   33 RLFYTTPLKALSNQKFRDFRRTFGDNYVGLLTGDSAINREAPI 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23748.6421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L357_9PHAE2.970e-1997.62Helicase ATP-binding domain-containing protein n=1... [more]
D7G373_ECTSI4.530e-1997.62DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z819_9STRA4.860e-1786.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A359BHZ1_9CYAN2.310e-1681.40DEAD/DEAH box helicase n=2 Tax=Cyanobacteria/Melai... [more]
K2EWY9_9BACT8.060e-1676.74Uncharacterized protein n=3 Tax=Bacteria TaxID=2 R... [more]
UPI00194EC3C31.100e-1581.40DEAD/DEAH box helicase n=1 Tax=Spirulina major Tax... [more]
A0A7S4DB23_HETAK1.180e-1576.74Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2C9VWX3_MANES1.500e-1581.40Uncharacterized protein n=3 Tax=Crotonoideae TaxID... [more]
A0A073CD51_PLAAG1.500e-1586.05Uncharacterized protein n=1 Tax=Planktothrix agard... [more]
A0A8J5G814_ZINOF1.790e-1574.42Helicase ATP-binding domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..46
e-value: 1.2E-11
score: 46.0
NoneNo IPR availablePANTHERPTHR14074:SF34coord: 1..43
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 1..43
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23748contigH-paniculata_contig23748:3059..3199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23748.6421.1mRNA_H-paniculata_contig23748.6421.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23748 3059..3199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23748.6421.1 ID=prot_H-paniculata_contig23748.6421.1|Name=mRNA_H-paniculata_contig23748.6421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
RVFYTTPLKALSNQKFSDFRRQFGEDKVGLLTGDSSFNRDAQVGSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase