mRNA_H-paniculata_contig2374.6420.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A6H5JN04_9PHAE ([Acyl-carrier-protein] S-malonyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN04_9PHAE) HSP 1 Score: 566 bits (1460), Expect = 6.510e-197 Identity = 303/380 (79.74%), Postives = 332/380 (87.37%), Query Frame = 3
Query: 78 NSLLTTIAMMGAFGRSAAFVGTMGGGATVRGLASSCAPSASRARFACQSRQFYSHRKCAGAGMSMSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
++LL AM+GA R+AAFVGT+G V +SS + S AR R +GM MSD DF Y+SKVTFMFPGQGAQYMGMAA ICDEVPKAKELF+ AS ILGYDLL+KCKNGPK+VLDSTEVSQPAIFVCSMAAVEKLR ++GD ALD ATCAMGLSLGEYSALCFAGALSFEDGV+VTKARGEAMQAASDATDGSMVSVIGLK++ VQ+ICDAAAK+SGEPVQ VANFLCNGNYAVSG+SKACDVVEQIAKPDFKARMTVRLAVAGAFHT+FMEAAVDKLG VL SI++KKPRIPV+SNVDA+PHSDP+VIKDILKKQVTNPVQFEQSL+NVM KGFEYGYECGPGKVVAGILKRVD+KA MTN+EV
Sbjct: 4 STLLAATAMLGACSRTAAFVGTLG---AVGRQSSSRVAAGSAARGVSGRR----------SGMRMSDTDFAEYNSKVTFMFPGQGAQYMGMAAGICDEVPKAKELFEKASTILGYDLLDKCKNGPKNVLDSTEVSQPAIFVCSMAAVEKLRLDEGDEALDAATCAMGLSLGEYSALCFAGALSFEDGVRVTKARGEAMQAASDATDGSMVSVIGLKSDKVQEICDAAAKESGEPVQ-VANFLCNGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGAVLDSIEVKKPRIPVVSNVDAEPHSDPAVIKDILKKQVTNPVQFEQSLANVMGKGFEYGYECGPGKVVAGILKRVDRKAKMTNIEV 369
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A835ZIZ1_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIZ1_9STRA) HSP 1 Score: 511 bits (1315), Expect = 8.490e-176 Identity = 257/316 (81.33%), Postives = 289/316 (91.46%), Query Frame = 3
Query: 270 MSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
MSDG+FD Y SKV+FMFPGQGAQY+GMAA+ICDEVP AK++F+TA ILGYDLLE+C NGPK+VLDSTEVSQPAIFVCSMAAVEKLRQEKGDAA+D+ATCAMGLSLGEYSALCFAGALSFEDGV+VTKARGEAMQ ASDATDG+MVSVIGL + V+D+C AAA++SG+PV VANFLCNGNYAVSGAS ACDVVEQIAKPDFKARMTVRLAVAGAFHT FM AVDKLG VL SI++ KPRIPVISNVDAKPHSDP VIK++LKKQVTNPV +E +++ V+ +G+E GYECGPGKVVAGILKRVD+KA +TNVEV
Sbjct: 1 MSDGEFDDYTSKVSFMFPGQGAQYVGMAASICDEVPAAKKMFETAKEILGYDLLERCTNGPKEVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAAVDEATCAMGLSLGEYSALCFAGALSFEDGVRVTKARGEAMQLASDATDGAMVSVIGLDSATVKDLCAAAAEKSGKPVA-VANFLCNGNYAVSGASAACDVVEQIAKPDFKARMTVRLAVAGAFHTEFMSTAVDKLGTVLDSIEIGKPRIPVISNVDAKPHSDPKVIKELLKKQVTNPVLWENTMAEVLKRGYERGYECGPGKVVAGILKRVDRKAEITNVEV 315
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A7S2PIE1_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PIE1_9STRA) HSP 1 Score: 442 bits (1137), Expect = 2.510e-148 Identity = 225/326 (69.02%), Postives = 270/326 (82.82%), Query Frame = 3
Query: 243 RKCAGAGMSM-SDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
++ G +M SD DFD + SKV+FMFPGQGAQ++GM + + + VP AK LFD AS ILGYDLL +CK GPK++LDSTEVSQPAIFV SMAAVEKLRQE+GD A+D ATCAMGLSLGEYSALCFA A+SF DGVK+TKARGEAMQAA+DA D SMVSVIGL + V +IC+AA+++SGE +Q +AN+LCNGNYAVSG+SKACD VE+IAKPDFKARMTVRLAVAGAFHT+FM AV L VL+ +++KKPRIPVISNVDAKPHSDP VIK +L QVT+PV +E ++++++ K FE E GPGKV AGILKR D+KA +NVEV
Sbjct: 27 KRAVGIARNMASDTDFDDFSSKVSFMFPGQGAQFVGMCSEVAENVPAAKALFDEASEILGYDLLTRCKEGPKELLDSTEVSQPAIFVASMAAVEKLRQEEGDEAIDAATCAMGLSLGEYSALCFADAISFADGVKITKARGEAMQAAADAVDSSMVSVIGLSKDVVSEICEAASEKSGEKIQ-IANYLCNGNYAVSGSSKACDTVEEIAKPDFKARMTVRLAVAGAFHTDFMAPAVSALEEVLADVEIKKPRIPVISNVDAKPHSDPEVIKKLLATQVTSPVLWENTMASILEKDFERAVELGPGKVTAGILKRTDRKAECSNVEV 351
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A6S9ET31_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ET31_9STRA) HSP 1 Score: 439 bits (1130), Expect = 3.070e-147 Identity = 228/338 (67.46%), Postives = 274/338 (81.07%), Query Frame = 3
Query: 204 ARFACQSRQFYSHRKCAGAGMSMSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
A FA S + +S R + + SD DFD + SKV+FMFPGQGAQ++GM A +C++VP AK LFD AS ILGYDLLE+C NGPK++LDSTEVSQPAIFV SMAAVEKL+QE+G A+D ATCAMGLSLGEYSALCFA A+SF DGVK+TKARGEAMQ+A+DA D MVSVIGL + V ++C+AAA++SG+ ++ +ANFLCNGNYAVSGAS+ACDVV +IAKPDFKARMTV+LAVAGAFHT+FM AV L VL+ I++KKPRIPVISNVDA PHSDP IK +L QVT+PV +E ++ +++SKGFE E GPGKV AGILKR DKKA NVEV
Sbjct: 19 AAFAPSSVRAFSRRSVSP--LMASDSDFDDFTSKVSFMFPGQGAQFVGMCADVCNDVPAAKALFDEASEILGYDLLERCTNGPKELLDSTEVSQPAIFVASMAAVEKLKQEEGQEAVDAATCAMGLSLGEYSALCFADAISFADGVKITKARGEAMQSAADAVDSGMVSVIGLGKDVVAELCEAAAEKSGKSIR-IANFLCNGNYAVSGASEACDVVTEIAKPDFKARMTVKLAVAGAFHTDFMAPAVSALEEVLAGIEIKKPRIPVISNVDASPHSDPETIKKLLATQVTSPVLWENTMQSILSKGFERAVELGPGKVTAGILKRTDKKAECKNVEV 353
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A7S4MDP8_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MDP8_9STRA) HSP 1 Score: 436 bits (1120), Expect = 1.100e-145 Identity = 225/325 (69.23%), Postives = 264/325 (81.23%), Query Frame = 3
Query: 246 KCAGAGMSMSDGDFDS-YDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
+ A +S SD DFD + ++V+FMFPGQGAQ++GM +C EVP AK+LFD AS ILGYDLLE+C GPK+VLDSTEVSQPAIFV SMAAVEKLRQE+G+ A+D ATCAMGLSLGEYSALCFAGAL F DGVKVTKARGEAMQAASDA + MVSVIGL E V ++C+AA ++SGE ++ +ANFLCNGNYAVSG KACDVV +IAKP+FKARMTV+LAVAGAFHT+FM AV L VL +I+LKKPRIPVISNVDAKPHSDP IK +L QVT+PV +E ++ ++++ GFE E GPGKV AGILKR KKA TNVEV
Sbjct: 33 RAASTKLSASDNDFDDDFSTQVSFMFPGQGAQFVGMCDDLCKEVPAAKDLFDQASEILGYDLLERCTEGPKEVLDSTEVSQPAIFVASMAAVEKLRQEQGEEAVDAATCAMGLSLGEYSALCFAGALDFADGVKVTKARGEAMQAASDAVESGMVSVIGLAKEKVAEVCEAAKEKSGEEIK-IANFLCNGNYAVSGGLKACDVVAEIAKPEFKARMTVKLAVAGAFHTDFMAPAVSSLEEVLETIELKKPRIPVISNVDAKPHSDPETIKKLLATQVTSPVLWENTMDSMLASGFERAVELGPGKVTAGILKRFSKKAECTNVEV 356
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: B8C2A9_THAPS ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2A9_THAPS) HSP 1 Score: 433 bits (1114), Expect = 8.830e-145 Identity = 224/326 (68.71%), Postives = 264/326 (80.98%), Query Frame = 3
Query: 243 RKCAGAGMSM-SDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
R+ A + M M SD DFD + SKV+FMFPGQGAQ++GM +C EVP AK LFD AS ILGYDLL C GPK+ LDST VSQPAIFV SMAAVEKLRQE+G A+D ATCAMGLSLGEYSALCFAGA+SF DGVKVTKARGEAMQAASDA D MVSVIGL E ++C+AA+++SGE +Q +AN LC+GNYAVSG KACDVV +IAKPDFKARMTV+LAVAGAFHT+FM AVD L VL ID++KPRIPVISNVDAKPHSDP+ IK++L KQVT+PV +E S+++++ GFE E GPGKV G+LKR++K A+ +NVEV
Sbjct: 32 RRAAASSMRMASDNDFDDFSSKVSFMFPGQGAQFVGMCGDVCKEVPAAKALFDEASEILGYDLLSICTEGPKEKLDSTVVSQPAIFVASMAAVEKLRQEEGQDAVDAATCAMGLSLGEYSALCFAGAISFADGVKVTKARGEAMQAASDAIDTGMVSVIGLDKEKCTELCEAASEKSGEKIQ-IANLLCDGNYAVSGHMKACDVVAEIAKPDFKARMTVKLAVAGAFHTDFMAPAVDSLKEVLEGIDIQKPRIPVISNVDAKPHSDPATIKELLAKQVTSPVLWEDSMASMLEHGFERAVELGPGKVTTGVLKRINKTAASSNVEV 356
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A7S2PW15_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PW15_9STRA) HSP 1 Score: 431 bits (1109), Expect = 3.790e-144 Identity = 222/325 (68.31%), Postives = 261/325 (80.31%), Query Frame = 3
Query: 243 RKCAGAGMSMSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
R+ A + SD DFD + SKVTFMFPGQGAQ++GM C EVP AK LFD AS ILGYDLL+ C +GPK+ LDST VSQPAIFV SMAAVEKL+ EKG A+D+ATCAMGLSLGEYSALCFAGA+SF DGVKVTKARGEAMQAASDA D MVSVIGL E V ++C+AA+++SGE +Q +AN LCNGNYAVSG KACD + +IAKP+FKARMTV+LAVAGAFHT+FM AV+ L VL I++ KPRIPV+SNVDA PHSDP+ IK +L KQVT PV +E S+++V+SKGFE E GPGKV AG+LKR+DK A+ NVEV
Sbjct: 25 RRAASSLHMASDNDFDDFTSKVTFMFPGQGAQFVGMCEETCKEVPAAKALFDEASEILGYDLLDLCVSGPKEKLDSTVVSQPAIFVASMAAVEKLKAEKGQEAVDEATCAMGLSLGEYSALCFAGAISFADGVKVTKARGEAMQAASDAIDTGMVSVIGLSKEKVGELCEAASEKSGEKIQ-IANLLCNGNYAVSGHMKACDTLAEIAKPEFKARMTVKLAVAGAFHTDFMAPAVESLEKVLEDIEINKPRIPVVSNVDASPHSDPATIKKLLAKQVTAPVMWEDSVASVLSKGFERAMELGPGKVTAGVLKRIDKTAACENVEV 348
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: K0R6U7_THAOC ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6U7_THAOC) HSP 1 Score: 429 bits (1104), Expect = 2.080e-143 Identity = 223/323 (69.04%), Postives = 263/323 (81.42%), Query Frame = 3
Query: 252 AGAGMSMSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMS-KGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
A + M+D DFD + SKVTFMFPGQGAQ++GMA C VP AK LFD AS ILGYDLL+ C +GPK+ LDST VSQPAIFV SMAAVEKLRQE+G A+D ATC +GLSLGEYSALCFA A+SF DGVKVTKARGEAMQAASDA D MVSVIGL + V+++C+ A++QSGE VQ +AN LCNGNYAVSG KACD V +IAKPDFKARMTV+LAVAGAFHT+FM AVD L VL +I++KKPRIPV+SNVDAKPHSDP+VIK++L KQVT+PV +E S+++V+ KGFE E GPGKV AG+LKR+DK A+ +NV V
Sbjct: 26 ASTALRMADTDFDDFSSKVTFMFPGQGAQFVGMAEETCKTVPAAKALFDEASEILGYDLLDLCVSGPKEKLDSTVVSQPAIFVASMAAVEKLRQEEGQEAVDSATCTLGLSLGEYSALCFADAISFADGVKVTKARGEAMQAASDAIDTGMVSVIGLSKDVVEELCNKASEQSGEKVQ-LANLLCNGNYAVSGHMKACDTVAEIAKPDFKARMTVKLAVAGAFHTDFMAPAVDSLKEVLETIEIKKPRIPVVSNVDAKPHSDPAVIKELLAKQVTSPVLWEDSIASVLEGKGFEKAVELGPGKVTAGVLKRIDKSAACSNVGV 347
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A7S2WHJ2_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WHJ2_9STRA) HSP 1 Score: 417 bits (1073), Expect = 1.380e-138 Identity = 211/318 (66.35%), Postives = 257/318 (80.82%), Query Frame = 3
Query: 264 MSMSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
++ SD DFD + SKV+FMFPGQGAQ++GM + +VP AK LFD AS +LGYDLLE+C GPK++LDSTEVSQPAIFV SMAAVEK++QEKG A+D ATCAMGLSLGEYSALCFA A+SF D VK+TK RG+AMQAASDA D MVS+IGL + V ++CDAA+++SGE VQ +AN+LCNGNYAVSG+SKACDVV +IAKP+FKARMT++LAVAGAFHT+FM AV L VL+ ++KKPRIPVISNVDAKPHSDP I+ +L KQVT+PV +E ++ ++SK FE E GPGKV AGILKR + A N+EV
Sbjct: 41 LAASDDDFDDFTSKVSFMFPGQGAQFVGMCGELVKDVPAAKALFDEASEVLGYDLLERCVEGPKELLDSTEVSQPAIFVASMAAVEKMKQEKGQEAMDAATCAMGLSLGEYSALCFADAISFADCVKITKIRGQAMQAASDAVDTGMVSIIGLDKDKVGELCDAASEKSGESVQ-IANYLCNGNYAVSGSSKACDVVAEIAKPEFKARMTIKLAVAGAFHTDFMAPAVSALEEVLADTEIKKPRIPVISNVDAKPHSDPDTIRKLLAKQVTSPVLWENTMELMLSKDFERAVELGPGKVTAGILKRTSRTAECENIEV 357
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Match: A0A1E7FU71_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FU71_9STRA) HSP 1 Score: 417 bits (1071), Expect = 2.580e-138 Identity = 214/318 (67.30%), Postives = 253/318 (79.56%), Query Frame = 3
Query: 264 MSMSDGDFDSYDSKVTFMFPGQGAQYMGMAATICDEVPKAKELFDTASGILGYDLLEKCKNGPKDVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAALDDATCAMGLSLGEYSALCFAGALSFEDGVKVTKARGEAMQAASDATDGSMVSVIGLKAENVQDICDAAAKQSGEPVQQVANFLCNGNYAVSGASKACDVVEQIAKPDFKARMTVRLAVAGAFHTNFMEAAVDKLGVVLSSIDLKKPRIPVISNVDAKPHSDPSVIKDILKKQVTNPVQFEQSLSNVMSKGFEYGYECGPGKVVAGILKRVDKKASMTNVEV 1217
++ SD DFD + +K MFPGQGAQ++GM + + +VP AK LFD AS ILGYDLLE C GPK+ LDST VSQPAIFV SMAAVEKL+Q+ G A+D+ATCAMGLSLGEYSALCFAGALSF DGVK+TKARGEAMQAASDA D MVSVIGL + V ++C+AA+++SGE VQ +ANFLC GNYAVSGAS ACD + +IAKP+FKARMTVRLAVAGAFHT+FM AV L VL +++KKPRIPVISNVDAKPHSDP IK +L QVT+PV +E ++ ++SK FE YE GPGKVV+GILKR K A TN+ V
Sbjct: 39 VAASDNDFDDFSAKCAVMFPGQGAQFVGMCSEVVKDVPAAKALFDEASEILGYDLLEVCTEGPKEKLDSTVVSQPAIFVASMAAVEKLKQDSGPEAVDEATCAMGLSLGEYSALCFAGALSFADGVKITKARGEAMQAASDAVDSGMVSVIGLDSGKVAELCEAASEKSGEKVQ-IANFLCKGNYAVSGASAACDTLAEIAKPEFKARMTVRLAVAGAFHTDFMAPAVSSLEDVLKEVEIKKPRIPVISNVDAKPHSDPETIKKLLATQVTSPVLWENTMDLMLSKDFEKAYELGPGKVVSGILKRFSKTAECTNISV 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2374.6420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2374.6420.1 >prot_H-paniculata_contig2374.6420.1 ID=prot_H-paniculata_contig2374.6420.1|Name=mRNA_H-paniculata_contig2374.6420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=387bp MTSNSFNSLLTTIAMMGAFGRSAAFVGTMGGGATVRGLASSCAPSASRARback to top mRNA from alignment at H-paniculata_contig2374:9592..21186- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2374.6420.1 ID=mRNA_H-paniculata_contig2374.6420.1|Name=mRNA_H-paniculata_contig2374.6420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11595bp|location=Sequence derived from alignment at H-paniculata_contig2374:9592..21186- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2374:9592..21186- >mRNA_H-paniculata_contig2374.6420.1 ID=mRNA_H-paniculata_contig2374.6420.1|Name=mRNA_H-paniculata_contig2374.6420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2322bp|location=Sequence derived from alignment at H-paniculata_contig2374:9592..21186- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |