prot_H-paniculata_contig2373.6418.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2373.6418.1
Unique Nameprot_H-paniculata_contig2373.6418.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length213
Homology
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: D8LNC1_ECTSI (RIBOSOMAL_L9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC1_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.160e-41
Identity = 88/217 (40.55%), Postives = 130/217 (59.91%), Query Frame = 0
Query:    1 MYILLRRTRPLSWFFAAPGTSICSGRKSARLTVASSSIIATRQFGTVSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPG----APTREVTAQNVSDYLLKARRLDIPAENIAM----EPITSLGVHNLRVQVAFPPEIREMLQKDLGASEYEEQSWVDKTLTI 209
            M +LLRR RPLSW  +A        R++A L     S    RQ GTV +IL +D+ G GY+GE V +RGG+MRN+LFP+K+A+YAT++N+  Y +V +T + E+  ALKALKRGR+ LS + I  KR++   G     P + V A++VS YL K    ++  E + +    +PIT++G H + V+         +L  +LGA E EE++WV   L +
Sbjct:    1 MSMLLRRARPLSWVKSAE-------RRTALLPT---SARGRRQLGTVKVILTDDVSGTGYRGEYVDIRGGFMRNFLFPSKRAIYATDDNRLAYEAVDRTAEKERAAALKALKRGRQELSGITIVLKRNMPAGGKGGMTPGQAVRAKDVSGYLRKNSPFEVTEEEVRLPGSGKPITTVGQHTVLVRTKLSESETAILAGELGAKELEEKAWVQVELVV 207          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: K3X919_GLOUD (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X919_GLOUD)

HSP 1 Score: 94.0 bits (232), Expect = 3.810e-20
Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 0
Query:   41 TRQFG-TVSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPT--REVTAQNVSDYLLKARRLDIPAENIAME-PITSLGVHNLRVQV 178
            +R FG  VS++LK+D+   G++GEEV V+ GY RN+L+P K AVYATE N + Y   +++ D       +ALK+    LS+V + FKRH       T    VTAQN+SD L K   + +    I +  PI +LG H+++V+V
Sbjct:   23 SRAFGHRVSMVLKQDVANLGFRGEEVSVKAGYARNFLYPEKLAVYATEANLEKYKVNKESVDEADAEKERALKQIISRLSSVEVVFKRHTASKAEQTLHSSVTAQNISDMLEKQHGIIVGVARINLPTPIKTLGSHSVKVRV 164          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: A0A3M6VRU6_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU6_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.060e-18
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 0
Query:   47 VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTR---EVTAQNVSDYLLKAR-------RLDIPAENIAMEPITSLGVHNLRVQV 178
            VS++LKED+   GY+G+EV V+ GY RNYL+P K AVYATE N + Y   +++ D  ++     L+     LSN+ + FKRH T   A  +   EV AQN+SD L K         R+D+PA      PI +LG H ++V+V
Sbjct:   28 VSMVLKEDVGNLGYRGDEVFVKAGYARNYLYPEKLAVYATEANLQKYKVDKESVDETQLEKEHELEAIIHQLSNIEVVFKRH-TASKADVKLHSEVNAQNISDMLEKQHDLIVGVARIDLPA------PIKTLGEHMVKVRV 162          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: F0WA30_9STRA (Transmembrane protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WA30_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.380e-18
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   39 IATRQFGT-VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTRE--VTAQNVSDYLLKARRLDIPAENIAME-PITSLGVHNLRVQVAFPPEIREMLQKDLGA 194
            +A R FG  V++ILK+D++  G +G+EV V+ GY RNYL+P K AVYAT EN+K +   +++ D  K++  + L+R  K ++++ +  KRH       T    +TA  VSD LLK   L +    I +  PIT+LG H ++V+V    E  E LQK+  A
Sbjct:   21 LAIRPFGHYVNLILKQDIKKLGNRGDEVRVKAGYARNYLYPEKLAVYATPENQKTHKINKESSDELKLDKERDLQRVIKKITSIELLLKRHTPSKREKTFSGAITAPIVSDMLLKQHGLLVGRARIQLPVPITNLGDHVIKVRVDDQVE-SEFLQKEAAA 179          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: A0A6G0NA99_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NA99_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.760e-18
Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   47 VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTR---EVTAQNVSDYLLKARRLDIPAENIAME-PITSLGVHNLRVQV 178
            V+++LKED+   G++G+EV V+ GY RN+L+P K AVYAT+ N+  Y   Q++ D  ++     L+     LSNV +TFKRH T   A  +   EV AQN+SD L K   L +    I +  PI +LG H ++V+V
Sbjct:   59 VNMVLKEDVPKLGFRGDEVSVKAGYARNFLYPEKLAVYATDANRHKYKVYQQSVDETQLEKEHELEAIIHHLSNVEVTFKRH-TASKADVKLHSEVNAQNISDMLEKQHGLIVGVARIDLPTPIKTLGEHTVKVRV 193          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: A0A2D4BE16_PYTIN (Ribosomal protein L9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE16_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 1.560e-17
Identity = 60/172 (34.88%), Postives = 94/172 (54.65%), Query Frame = 0
Query:   39 IATRQFG-TVSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTRE--VTAQNVSDYLLKARRLDIPAENIAM-EPITSLGVHNLRVQVAFPPEIREMLQKDLGASEY-EEQSWVDK 205
            + +R FG  VS++LKED+   GY+G+EV V+ G+ RN+L+P K AVYATE N+  Y   + + +       + LK+    LS V + FKRH       T    VTAQ +SD L K   + +    + +  PI +LG H+++++V    E    + +   A+E  EE + VD+
Sbjct:   21 VLSRAFGHRVSMVLKEDVASLGYRGDEVSVKAGFARNFLYPQKLAVYATEANRLKYKVDRXSANEVDAEKERTLKQIINRLSTVTVYFKRHTATKADQTLHTCVTAQEISDMLDKQYGITVGVARVDLTHPIKTLGSHSVKIRVDEEVEKEVAIAQATAAAEAGEEHTPVDE 192          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: G4ZII5_PHYSP (RIBOSOMAL_L9 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZII5_PHYSP)

HSP 1 Score: 87.0 bits (214), Expect = 1.770e-17
Identity = 54/136 (39.71%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   47 VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTR---EVTAQNVSDYLLKARRLDIPAENIAME-PITSLGVHNLRVQV 178
            V+++LKED+   G++G+EV V+ GY RN+L+P K AVYAT+ N++ Y   +++ D  ++     L+     LSNV + FKRH T   A  +   EV AQN+SD L K   L +    I +  PI +LG H ++V+V
Sbjct:   31 VNMVLKEDVPKLGFRGDEVSVKAGYARNFLYPEKLAVYATDANREKYKGDKESVDESELEKEHELEAIIYRLSNVEVVFKRH-TASKADVKLHSEVNAQNISDMLEKQHGLIVGVARIDLPTPIKTLGEHTVKVRV 165          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: A0A024GIB8_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIB8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.860e-17
Identity = 59/160 (36.88%), Postives = 94/160 (58.75%), Query Frame = 0
Query:   39 IATRQFGT-VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTRE--VTAQNVSDYLLKARRLDIPAENIAME-PITSLGVHNLRVQVAFPPEIREMLQKDLGA 194
            +  R FG  V++ILK+D+E  G +G+EV V+ GY RNYL+P K AVYAT EN+ ++   +++ D   ++  + L++  K + ++ + FKRH       T    +TA  VSD LL+   L +    I +  PIT+LG H ++V+V    E ++ L+KD  A
Sbjct:   21 LTVRSFGHYVNLILKQDVEKLGNRGDEVRVKAGYARNYLYPEKLAVYATPENQNIHKINKESRDELGLDKERELQKVIKKIMSIELLFKRHTPSKREKTFSGAITAPIVSDMLLRQHGLLVGRARIQLPIPITNLGDHVIKVRVDDQVE-KQYLEKDATA 179          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: A0A6A3JV10_9STRA (RIBOSOMAL_L9 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JV10_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 8.580e-17
Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   47 VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTR---EVTAQNVSDYLLKARRLDIPAENIAME-PITSLGVHNLRVQV 178
            V+++LKED+   G++G+EV V+ GY RN+L+P K AVYAT+ N+  Y   Q++ D  ++     L+     LSNV +TFKRH T   A  +   EV AQN+SD L K   L +    I +  PI +LG H ++V+V
Sbjct:  467 VNMVLKEDVPKLGFRGDEVSVKAGYARNFLYPEKLAVYATDANRHKYKVDQQSVDETQLEKEHELEAIIHHLSNVEVTFKRH-TASKADVKLHSEVNAQNISDMLEKQHGLIVGVARIDLPTPIKTLGEHTVKVRV 601          
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Match: A0A1V9YIA2_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIA2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.710e-16
Identity = 56/155 (36.13%), Postives = 89/155 (57.42%), Query Frame = 0
Query:   30 RLTVASSSIIATRQFGT-VSIILKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHS---VQKTEDTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTRE-VTAQNVSDYLLKARRLDIPAENIAMEP-ITSLGVHNLRVQV 178
            R+ + +  ++  R F   V ++LKED+E  G+ G+ V V+ G+ RN+L+P KKAVYAT+ N   Y     V    DTE+ +A + +    K LS++ +TFKRH   P   T+  VTAQN+ D L K   + + A  + +   + S G HN++++V
Sbjct:    5 RVVLRAPRVLGLRSFANRVDMVLKEDVEKLGFSGDIVNVKAGFARNFLYPQKKAVYATKLNVTKYAQDKVVDSGVDTEREHAREKIV---KRLSSIELTFKRHCPTPKPMTKSSVTAQNIVDMLEKQHGIIVGAARVILPAELKSTGNHNVKIRV 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2373.6418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC1_ECTSI2.160e-4140.55RIBOSOMAL_L9 domain-containing protein n=2 Tax=Ect... [more]
K3X919_GLOUD3.810e-2040.85RIBOSOMAL_L9 domain-containing protein n=1 Tax=Glo... [more]
A0A3M6VRU6_9STRA1.060e-1841.55RIBOSOMAL_L9 domain-containing protein n=1 Tax=Per... [more]
F0WA30_9STRA2.380e-1839.38Transmembrane protein putative n=1 Tax=Albugo laib... [more]
A0A6G0NA99_9STRA3.760e-1841.18RIBOSOMAL_L9 domain-containing protein n=1 Tax=Phy... [more]
A0A2D4BE16_PYTIN1.560e-1734.88Ribosomal protein L9 n=1 Tax=Pythium insidiosum Ta... [more]
G4ZII5_PHYSP1.770e-1739.71RIBOSOMAL_L9 domain-containing protein n=4 Tax=Phy... [more]
A0A024GIB8_9STRA6.860e-1736.88RIBOSOMAL_L9 domain-containing protein n=1 Tax=Alb... [more]
A0A6A3JV10_9STRA8.580e-1741.18RIBOSOMAL_L9 domain-containing protein n=4 Tax=Phy... [more]
A0A1V9YIA2_9STRA1.710e-1636.13Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036935Ribosomal protein L9, N-terminal domain superfamilyGENE3D3.40.5.10coord: 47..106
e-value: 2.9E-15
score: 57.5
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 48..92
e-value: 2.5E-18
score: 65.3
IPR020070Ribosomal protein L9, N-terminalPROSITEPS00651RIBOSOMAL_L9coord: 59..86
IPR020594Ribosomal protein L9, bacteria/chloroplastTIGRFAMTIGR00158TIGR00158coord: 48..178
e-value: 1.9E-19
score: 68.6
IPR000244Ribosomal protein L9PANTHERPTHR2136850S RIBOSOMAL PROTEIN L9coord: 40..179
NoneNo IPR availablePANTHERPTHR21368:SF1839S RIBOSOMAL PROTEIN L9, MITOCHONDRIALcoord: 40..179
IPR036791Ribosomal protein L9, C-terminal domain superfamilySUPERFAMILY55653Ribosomal protein L9 C-domaincoord: 104..178
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 48..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2373contigH-paniculata_contig2373:5625..8662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2373.6418.1mRNA_H-paniculata_contig2373.6418.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2373 5601..9115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2373.6418.1 ID=prot_H-paniculata_contig2373.6418.1|Name=mRNA_H-paniculata_contig2373.6418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
MYILLRRTRPLSWFFAAPGTSICSGRKSARLTVASSSIIATRQFGTVSII
LKEDLEGRGYKGEEVMVRGGYMRNYLFPTKKAVYATEENKKLYHSVQKTE
DTEKINALKALKRGRKTLSNVPITFKRHVTRPGAPTREVTAQNVSDYLLK
ARRLDIPAENIAMEPITSLGVHNLRVQVAFPPEIREMLQKDLGASEYEEQ
SWVDKTLTIVKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036935Ribosomal_L9_N_sf
IPR020070Ribosomal_L9_N
IPR020594Ribosomal_L9_bac/chp
IPR000244Ribosomal_L9
IPR036791Ribosomal_L9_C_sf
IPR009027Ribosomal_L9/RNase_H1_N