prot_H-paniculata_contig2371.6409.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2371.6409.1
Unique Nameprot_H-paniculata_contig2371.6409.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1172
Homology
BLAST of mRNA_H-paniculata_contig2371.6409.1 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.200e-40
Identity = 104/201 (51.74%), Postives = 129/201 (64.18%), Query Frame = 0
Query:  968 YVMVGDVLKVKCRRCRNRFARAACSIG-CFDCCFKAGKPCAAHAKQLERKRVEDALLAGGPSQSQRDEEARRLAKGVFKEEAIHAIGDTATVWCFMDFSRSKSNQGTFSALGRNQRATAGRSTPRSRRAARGKSARTDNGIAKVPTAGNIASGSSASRTGSXXXXXXX--AVTAESSRR-RVRPALARWRRKNAEMLNALR 1164
            YV +G V++V+C+ C+ R  RA C+ G C DCCFK+  PC AHAKQL+RKR+E+ LL+ GPSQSQ  E+ R + K +FKEE+ HAIGDTATVWCF+DF  +KSNQ  F++L R QRATAGR  PRSRRA+                               XXX      AV  ++ RR RVRPA+ARW+RKNAEML ALR
Sbjct:  372 YVRIGGVMQVRCKICKTRLGRAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSAGPSQSQIREKQRNI-KDIFKEESFHAIGDTATVWCFLDFLCAKSNQAAFTSLSRTQRATAGRDAPRSRRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDPESAVDGKARRRPRVRPAVARWQRKNAEMLTALR 571          
BLAST of mRNA_H-paniculata_contig2371.6409.1 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.550e-29
Identity = 93/179 (51.96%), Postives = 111/179 (62.01%), Query Frame = 0
Query:  991 CSIG-CFDCCFKAGKPCAAHAKQLERKRVEDALLAGGPSQSQRDEEARRLAKGVFKEEAIHAIGDTATVWCFMDFSRSKSNQGTFSALGRNQRATAGRSTPRSRRAARGKSARTDNGI---AKVPTAGNIASGSSASRTGSXXXXXXXAVTAESSRR-RVRPALARWRRKNAEMLNALR 1164
            C+ G C DCCFK+  PCAAHAKQL+RKR+E+ LL+  PSQSQ  E+ R + K  FKEE+ HAIGDT TVWCF+DF R+KSNQ  F++L R QRATAGR   RSRRA+              A  P                XXX    AV  ++  R RVR A+ARW+RKNAEML ALR
Sbjct:  797 CTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKPSQSQIREKQRNI-KDTFKEESFHAIGDTVTVWCFLDFVRAKSNQAAFTSLSRTQRATAGRDASRSRRASXXXXXXXXXXXXDDALPPXXXXXXXXXXXXXXXXXXXDPESAVGGKARVRVRVRQAVARWQRKNAEMLTALR 974          
BLAST of mRNA_H-paniculata_contig2371.6409.1 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 9.620e-13
Identity = 53/135 (39.26%), Postives = 62/135 (45.93%), Query Frame = 0
Query:  978 KCRRCRNRFARAACSIGCFDCCFKAGKPCAAHAKQLERKRVEDALLAG---------------------GPSQSQRDEEAR---RLAKGVFKEEAIHAIGDTATVWCFMDFSRSKSNQGTFSALGRNQRATAGRS 1088
            +C  C  +      S  CF+CC K+GKPC AHAKQ+ERK  ED LL G                     G      D+ A    RL  G FKE A  A G+TAT+WC  DF   K  Q     L R +R  AGRS
Sbjct:  374 RCGLCGRKAKLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXGSCGLMSPGLPGGAFDDGAAPRARLPPGAFKEAAFQATGETATLWCLKDFVCGKDTQTAMETLNRTERQKAGRS 508          
BLAST of mRNA_H-paniculata_contig2371.6409.1 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 6.660e-8
Identity = 45/120 (37.50%), Postives = 52/120 (43.33%), Query Frame = 0
Query:  989 AACSI-GCFDCCFKAGKPCAAHAKQLERKRVEDALLAG--------------------------GPSQSQRDEEARRLAKGVFKEEAIHAIGDTATVWCFMDFSRSKSNQGTFSALGRNQ 1081
            A CS   CF+CC K+GKPC AHAKQ+ERK  ED LL G                          G +         RL  G FKE A    G+TAT+WC  DF   K  Q     L R +
Sbjct:  637 AGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXXXXXGGLMSPGLPGGAFDDGTAPRARLPPGAFKEAAFQ--GETATLWCLKDFVCGKDTQTAMETLNRTE 754          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2371.6409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNI0_ECTSI1.200e-4051.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT8_9PHAE2.550e-2951.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL83_ECTSI9.620e-1339.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE6.660e-837.50Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2371contigH-paniculata_contig2371:1853..8726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2371.6409.1mRNA_H-paniculata_contig2371.6409.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2371 117..8849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2371.6409.1 ID=prot_H-paniculata_contig2371.6409.1|Name=mRNA_H-paniculata_contig2371.6409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1172bp
MPACSAVASSSGRSTADSGRRSSKAGGRKKTTSLRSSPSGISKDRKSKAA
AAPDGRNSVRRATLDSWVVRDSPTATPRAPEQGRGRSPLRYISPDGKLSR
HLDVSTEKMASGQAMVIELDVNGTLSTDSDSTHDTQPTSTRAAHVSATSI
PPRKNISTSPKARATAAKGMSTFTRKGVWTPPYNSRPAGAAKQVQNYSPP
PPTATVDVATTVAESPASPPDNSVAASRGRRASTPIAVRTPPRRKPARKK
GPSSSPVPAASTVAGAAVNGARASRGRRATLCPVPPVSNQPLGQRKHLAM
GDAQSLAFNASSSKSVTKNLKEAEAGENKSTVAAAAGLASDARSPLTPCA
SSWTASADVQPSSLANQSTMEMPQAAAIAELEAALAAEMLKLSDGVAGQG
KVSIDERMSAYMVMKSDSGGCGRGSSIADSLWTRSCGQGDAETAEASEPK
AGKRGRPAKKPKGTIKPATASVASAGPAVAVSGGGAINVGIKACALLVDI
QEEEEAEAAGNGDSSLPSHVVANPAVFASDTASASKGLTKKKRSVAEIKE
AASSAGALFVNVPAAADEAQRKKKRKSTASVTTKANGSFEWADGVSGGVE
TTALETVQVSAVVTSGRKNKKRKAPTVETEAATEHMKSPQTSDRSCKGSG
KDRGGRKAGEKGSPRTLSSMNNDKSSTKKKKTVAGSAFAAPPSPVVVSKK
EFDRMQRIAAAGGFGWRPMPAMRVIPPPESPVQSKIPPPVVATVGPVVAV
AMRMPEDVQAFPADTAGGREGVLSTKVKKPAVHHEATAMEKSTPVDVSAT
KEASATRDEKGWCGWMKSCRSTATEVSEEPQSPPSRAPATPSATSPQADL
ANAPKDLPTDAPAAIIDPGDHPAQSCETSDTSTLGEERASSIPAAPASAP
ASAAGGKGLAAAPALMPQGRPADAMETESAHVEEKSMADAGMVEGKETGS
TGEEEWDKDGDEVSKELYVMVGDVLKVKCRRCRNRFARAACSIGCFDCCF
KAGKPCAAHAKQLERKRVEDALLAGGPSQSQRDEEARRLAKGVFKEEAIH
AIGDTATVWCFMDFSRSKSNQGTFSALGRNQRATAGRSTPRSRRAARGKS
ARTDNGIAKVPTAGNIASGSSASRTGSAGAAGASAVTAESSRRRVRPALA
RWRRKNAEMLNALRARSQQPE*
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