prot_H-paniculata_contig23705.6407.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23705.6407.1
Unique Nameprot_H-paniculata_contig23705.6407.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig23705.6407.1 vs. uniprot
Match: D7FN94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN94_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 9.320e-41
Identity = 73/105 (69.52%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    1 TACGTENTVTRKYAQIRFETATGAFEVELEDVPAVFVVSHATGRYGKAGLLDLFVGAQLNILGRQMRLMQCDGPTARWLERELKSIIKTKAALVTAIEKEGEHVR 105
            T  GTENTV RK+A IR+ TA G+ EVELEDVPA+F VSHATGRYGK G +D+ VGAQL+ILGRQMRLMQCDG TA+WLE E+++I K KAAL+TA+E  G+ VR
Sbjct:  276 TTTGTENTVNRKHASIRYSTANGSLEVELEDVPAIFEVSHATGRYGKVGAVDIRVGAQLSILGRQMRLMQCDGVTAQWLESEVRAITKAKAALITAVEDGGDSVR 380          
BLAST of mRNA_H-paniculata_contig23705.6407.1 vs. uniprot
Match: A0A6H5KUJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ0_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 4.570e-21
Identity = 55/105 (52.38%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 TACGTENTVTRKYAQIRFETATGAFEVELEDVPAVFVVSHATGRYGKAGLLDLFVGAQLNILGRQMRLMQCDGPTARWLERELKSIIKTKAALVTAIEKEGEHVR 105
            T  GTENTV RK+A IR+  A G+ EVELEDVPA+F VSHATGR  KA      V               CDG TA+WLE E+++I K KAAL+ AIE  G+ VR
Sbjct:  290 TTTGTENTVNRKHASIRYSAANGSLEVELEDVPAIFEVSHATGRQTKASGFVKCV---------------CDGVTAQWLESEVRAITKAKAALIAAIEDGGDSVR 379          
BLAST of mRNA_H-paniculata_contig23705.6407.1 vs. uniprot
Match: A0A7S2G3U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G3U3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.010e-10
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   11 RKYAQIRFETATGAFEVELEDVPAVFVVSHATGRYGKAGLLDLFVGAQLNILGRQMRLMQCDGPTARWLERELKSIIKTKAALVTAIEKEG 101
            R+   ++++  TG F V+L      + ++H  GRYG   + DLFVGA +NILG+   LMQ +  T+ W+E E K + K +  L   + K G
Sbjct:   42 RRELTLQYDVVTGEFLVKLSGTDKGYSLTHIMGRYGPVEIWDLFVGANINILGKPTTLMQANLKTSDWIEAEAKRLQKLQKQLGAELRKYG 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23705.6407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FN94_ECTSI9.320e-4169.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUJ0_9PHAE4.570e-2152.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2G3U3_9STRA1.010e-1036.26Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.29.170coord: 29..93
e-value: 2.6E-5
score: 25.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23705contigH-paniculata_contig23705:2413..3724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23705.6407.1mRNA_H-paniculata_contig23705.6407.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23705 2413..3724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23705.6407.1 ID=prot_H-paniculata_contig23705.6407.1|Name=mRNA_H-paniculata_contig23705.6407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
TACGTENTVTRKYAQIRFETATGAFEVELEDVPAVFVVSHATGRYGKAGL
LDLFVGAQLNILGRQMRLMQCDGPTARWLERELKSIIKTKAALVTAIEKE
GEHVR
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