prot_H-paniculata_contig2370.6406.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2370.6406.1
Unique Nameprot_H-paniculata_contig2370.6406.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 254 bits (650), Expect = 4.080e-85
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0 
Query:   16 LFHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            +  TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    3 ITETMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.360e-84
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:   20 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A2M4CJ97_ANODA (Histone H3 (Fragment) n=2 Tax=Neoptera TaxID=33340 RepID=A0A2M4CJ97_ANODA)

HSP 1 Score: 252 bits (644), Expect = 4.100e-84
Identity = 135/143 (94.41%), Postives = 138/143 (96.50%), Query Frame = 0 
Query:   13 KSPLFHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            K P   TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    6 KHPEGRTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 148
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.230e-84
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:   20 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A4W5P680_9TELE (Histone H3 n=4 Tax=Bilateria TaxID=33213 RepID=A0A4W5P680_9TELE)

HSP 1 Score: 251 bits (641), Expect = 8.980e-84
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0 
Query:   17 FHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
             H MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    2 LHAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: D2I0A9_AILME (Histone H3 (Fragment) n=2 Tax=Carnivora TaxID=33554 RepID=D2I0A9_AILME)

HSP 1 Score: 251 bits (641), Expect = 9.610e-84
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0 
Query:   14 SPLFHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            SP+   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 SPVSSEMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 142
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: UPI001E6778CD (histone H3-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E6778CD)

HSP 1 Score: 252 bits (643), Expect = 1.000e-83
Identity = 134/141 (95.04%), Postives = 137/141 (97.16%), Query Frame = 0 
Query:   15 PLFHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            P   TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:   24 PQLFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 164
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A0C9RWZ2_9HYME (Histone H3 (Fragment) n=3 Tax=Endopterygota TaxID=33392 RepID=A0A0C9RWZ2_9HYME)

HSP 1 Score: 251 bits (641), Expect = 1.060e-83
Identity = 133/140 (95.00%), Postives = 137/140 (97.86%), Query Frame = 0 
Query:   16 LFHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            +F  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    6 IFDAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 145
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A3B4AB48_9GOBI (Histone H3 n=2 Tax=Bilateria TaxID=33213 RepID=A0A3B4AB48_9GOBI)

HSP 1 Score: 250 bits (639), Expect = 1.810e-83
Identity = 133/138 (96.38%), Postives = 136/138 (98.55%), Query Frame = 0 
Query:   18 HTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            H MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    3 HKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140
[Close]
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Match: A0A164UB18_9CRUS (Histone H3.2 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164UB18_9CRUS)

HSP 1 Score: 251 bits (640), Expect = 2.040e-83
Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 0 
Query:   16 LFHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 155
            L  TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:   15 LTKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2370.6406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P6C6_HETAK4.080e-8597.14Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
W4GZ05_9STRA1.360e-84100.00Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A2M4CJ97_ANODA4.100e-8494.41Histone H3 (Fragment) n=2 Tax=Neoptera TaxID=33340... [more]
A0A7S1BJN3_9STRA6.230e-8499.26Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
A0A4W5P680_9TELE8.980e-8495.68Histone H3 n=4 Tax=Bilateria TaxID=33213 RepID=A0A... [more]
D2I0A9_AILME9.610e-8494.37Histone H3 (Fragment) n=2 Tax=Carnivora TaxID=3355... [more]
UPI001E6778CD1.000e-8395.04histone H3-like n=1 Tax=Procambarus clarkii TaxID=... [more]
A0A0C9RWZ2_9HYME1.060e-8395.00Histone H3 (Fragment) n=3 Tax=Endopterygota TaxID=... [more]
A0A3B4AB48_9GOBI1.810e-8396.38Histone H3 n=2 Tax=Bilateria TaxID=33213 RepID=A0A... [more]
A0A164UB18_9CRUS2.040e-8395.71Histone H3.2 n=1 Tax=Daphnia magna TaxID=35525 Rep... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 77..94
score: 97.46
coord: 117..133
score: 96.93
coord: 22..36
score: 97.1
coord: 36..50
score: 92.32
coord: 133..154
score: 94.86
coord: 53..74
score: 93.58
coord: 99..117
score: 80.78
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 53..155
e-value: 2.0E-73
score: 260.0
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 12..154
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 34..40
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 86..94
IPR009072Histone-foldGENE3D1.10.20.10coord: 21..155
e-value: 3.4E-79
score: 265.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 21..152
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 20..151
e-value: 1.6E-53
score: 180.5
NoneNo IPR availablePANTHERPTHR11426:SF224coord: 12..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2370contigH-paniculata_contig2370:2388..2855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2370.6406.1mRNA_H-paniculata_contig2370.6406.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2370 2388..2855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2370.6406.1 ID=prot_H-paniculata_contig2370.6406.1|Name=mRNA_H-paniculata_contig2370.6406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
TCPYPALRRFQSKSPLFHTMARTKQTARKSTGGKAPRKQLATKAARKSAP
ATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT
DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI
RGERS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3