prot_H-paniculata_contig2365.6392.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2365.6392.1
Unique Nameprot_H-paniculata_contig2365.6392.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
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BLAST of mRNA_H-paniculata_contig2365.6392.1 vs. uniprot
Match: D8LRJ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRJ9_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.280e-14
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:   11 LDSARRSYAERKARKVSSMLQETFVAKFEVDHLPSQRQVYEKRGSLLYLVPREEAREKLEARERRLGEQLTALQDAA 87
            L  ARR YA  K+  +S+ LQE  VAKFEV+H  S RQ+Y KRG+LLYL PR E + KLEA E+ +GE+L  +Q AA
Sbjct:    4 LQEARREYAVSKSAALSTQLQEISVAKFEVEH--SHRQLYAKRGNLLYLTPRPEVKAKLEASEKGVGERLAKMQKAA 78
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2365.6392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRJ9_ECTSI2.280e-1455.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 21..85
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 20..85
e-value: 3.6E-8
score: 33.3
IPR009053PrefoldinGENE3D1.10.287.370coord: 11..89
e-value: 1.7E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2365contigH-paniculata_contig2365:15739..20657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2365.6392.1mRNA_H-paniculata_contig2365.6392.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2365 15500..21461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2365.6392.1 ID=prot_H-paniculata_contig2365.6392.1|Name=mRNA_H-paniculata_contig2365.6392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MNENSSSGLTLDSARRSYAERKARKVSSMLQETFVAKFEVDHLPSQRQVY
EKRGSLLYLVPREEAREKLEARERRLGEQLTALQDAAADPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR009053Prefoldin