prot_H-paniculata_contig23644.6389.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23644.6389.1
Unique Nameprot_H-paniculata_contig23644.6389.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
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BLAST of mRNA_H-paniculata_contig23644.6389.1 vs. uniprot
Match: D7FSG0_ECTSI (Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSG0_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 4.090e-20
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 0 
Query:    1 MFKGVLAHINGYTKVPVASIREMLASRGGVIEAYNTSKCTHMICESLPYAKIRELR 56
            +FKGV+AH NG+  VPV+++RE+L SRGG++EAYNTS+CTHMICE LP AKIRELR
Sbjct:   26 VFKGVVAHFNGHFPVPVSTLRELLVSRGGIVEAYNTSRCTHMICEVLPAAKIRELR 81
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BLAST of mRNA_H-paniculata_contig23644.6389.1 vs. uniprot
Match: A0A6H5L1W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W8_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.040e-19
Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = 0 
Query:    1 MFKGVLAHINGYTKVPVASIREMLASRGGVIEAYNTSKCTHMICESLPYAKIRELR 56
            +FKGV+AH NG+  VPV+++RE+L SRGG +EAYNTS+CTHMICE LP AKIRELR
Sbjct:  145 VFKGVVAHFNGHFPVPVSTLRELLVSRGGTVEAYNTSRCTHMICEVLPAAKIRELR 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23644.6389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSG0_ECTSI4.090e-2071.43Terminal deoxycytidyl transferase rev1, putative n... [more]
A0A6H5L1W8_9PHAE1.040e-1971.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 1..56
e-value: 9.0E-9
score: 37.4
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 1..55
NoneNo IPR availablePANTHERPTHR45990FAMILY NOT NAMEDcoord: 2..56
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1..56
score: 9.334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23644contigH-paniculata_contig23644:2097..2264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23644.6389.1mRNA_H-paniculata_contig23644.6389.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23644 2097..2288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23644.6389.1 ID=prot_H-paniculata_contig23644.6389.1|Name=mRNA_H-paniculata_contig23644.6389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MFKGVLAHINGYTKVPVASIREMLASRGGVIEAYNTSKCTHMICESLPYA
KIRELR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom