mRNA_H-paniculata_contig23640.6387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: K5WDQ3_AGABU (Uncharacterized protein n=2 Tax=Agaricus bisporus TaxID=5341 RepID=K5WDQ3_AGABU) HSP 1 Score: 78.2 bits (191), Expect = 1.660e-16 Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 37 PGSARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSLKVLQTFLKLSPVIATQTTVSIVITATAEQETIVVATKKNSGKSPRSKTVLILPQVHLRKPC 336
P SARCVQ FDDSL+SA TYRISLRSSS+ EPR P LKV FL+ +TT + Q + + + + S + +++ILPQVHLRKPC
Sbjct: 6 PRSARCVQRFDDSLNSAIHITYRISLRSSSMREPRDPLLKVADHFLQYLK----KTTKGAQVDENEVQTGVHILRRASYNPSRKHNSIMILPQVHLRKPC 101
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: A0A1L9WEI9_ASPA1 (Uncharacterized protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A1L9WEI9_ASPA1) HSP 1 Score: 76.6 bits (187), Expect = 8.650e-16 Identity = 49/109 (44.95%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 10 LRQACSQEYPGSARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSLKVLQTFLKLSPVIATQTTVSIVITATAEQETIVVATKKNSGKSPRSKTVLILPQVHLRKPC 336
L QAC PG A CVQ DDSL+SA +YRISLRSSS+ EPR P LKVL + + + QT + + K K + +V+ILPQVHLRKPC
Sbjct: 3 LGQACPPGIPGGAMCVQRLDDSLNSAIHISYRISLRSSSMPEPRDPLLKVLTDWYQSTQTARFQTVFHWGLRRARSRGQAPGRPKAGPPKQQGTHSVMILPQVHLRKPC 111
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: A0A1E7F0G0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0G0_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.140e-13 Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 2
Query: 11 SDKHAPRSIPEAQDAFKVLMIHWILQVARRIAFRCVLHRWGSQDIRR 151
SDKHA IP+AQ AFK+LMIH +LQ A RIAFRCVLHR G+ DI R
Sbjct: 8 SDKHATGKIPKAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 54
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: A0A6A6EYI2_9PEZI (Uncharacterized protein n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6EYI2_9PEZI) HSP 1 Score: 67.8 bits (164), Expect = 1.650e-12 Identity = 50/103 (48.54%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 37 PGSARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSLKVLQTFLKL---SPVIATQTTVSIVITATAEQETIVVATKKNSGKSPRSKTVLILPQVHLRKPC 336
P A CVQ FDDSL+SA TYRISLRSSS+ EPR P LKVL LKL V+A + T + E E P S V+I PQVHLR+PC
Sbjct: 6 PKGAICVQRFDDSLNSAIHITYRISLRSSSMPEPRDPLLKVLFNLLKLRRKDAVVAPEATSCVHKGLEVEPE------------GPHS--VMIPPQVHLRRPC 94
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: A0A2I1BSD4_ASPN1 (Uncharacterized protein n=1 Tax=Aspergillus novofumigatus (strain IBT 16806) TaxID=1392255 RepID=A0A2I1BSD4_ASPN1) HSP 1 Score: 67.8 bits (164), Expect = 2.570e-12 Identity = 51/112 (45.54%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 31 EYPGSARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSLKVLQTFLKLSPVIATQTTVSIVITA----------TAEQETIVVATKKNSGKSPRSKTVLILPQVHLRKPC 336
EY G A CVQ DDSL+SA TYRISLRSSS+ EPR P LKVL + + +T + +A A+Q TI + + + P S V+ILPQVHLRKPC
Sbjct: 4 EYQGGAMCVQRLDDSLNSAIHITYRISLRSSSMPEPRDPLLKVLTDYDNQLRLHTFRTAFMLGSSAGAGPGREASPAAQQGTIDTGGRLDP-EGPHS--VMILPQVHLRKPC 112
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: W6MTK3_9ASCO (Uncharacterized protein n=1 Tax=Kuraishia capsulata CBS 1993 TaxID=1382522 RepID=W6MTK3_9ASCO) HSP 1 Score: 67.0 bits (162), Expect = 3.470e-12 Identity = 48/97 (49.48%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 46 ARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSLKVLQTFLKLSPVIATQTTVSIVITATAEQETIVVATKKNSGKSPRSKTVLILPQVHLRKPC 336
A CVQ FDDS SA TYRISLRSSS+ EPR P LKV F + S V+ + T S++ + A Q +K S + +T +ILPQVHLRKPC
Sbjct: 9 AMCVQRFDDSRKSAIHNTYRISLRSSSMREPRDPLLKVFTPFDQ-SKVVFNKNT-SVIRFSLAAQA------RKGSARKA-IETEMILPQVHLRKPC 96
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: B8CEF4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEF4_THAPS) HSP 1 Score: 64.3 bits (155), Expect = 2.140e-11 Identity = 33/47 (70.21%), Postives = 35/47 (74.47%), Query Frame = 2
Query: 5 GGSDKHAPRSIPEAQDAFKVLMIHWILQVARRIAFRCVLHRWGSQDI 145
G SDKHA P+AQ AFK LMIH +LQ A RIAFRCVLHR G QDI
Sbjct: 31 GHSDKHALGHYPKAQCAFKSLMIHEVLQFALRIAFRCVLHRCGIQDI 77
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: A0A524MI88_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A524MI88_9PROT) HSP 1 Score: 64.7 bits (156), Expect = 4.030e-11 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 2
Query: 11 SDKHAPRSIPEAQDAFKVLMIHWILQVARRIAFRCVLHRWGSQDIRR 151
S +HA IPEAQ AFK+LMIH +LQ A RIAFRCVLHR G+ DI R
Sbjct: 73 STRHATGHIPEAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 119
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: K0S3C5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3C5_THAOC) HSP 1 Score: 62.8 bits (151), Expect = 7.230e-11 Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 2
Query: 5 GGSDKHAPRSIPEAQDAFKVLMIHWILQVARRIAFRCVLHRWGSQDI 145
G SDKHA + P+AQ AFK+LMIH +LQ RIA RCVLHR G QDI
Sbjct: 24 GHSDKHALGNYPKAQCAFKILMIHEVLQFVLRIAVRCVLHRCGIQDI 70
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Match: A0A833VLW4_9POAL (Uncharacterized protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VLW4_9POAL) HSP 1 Score: 64.7 bits (156), Expect = 9.460e-11 Identity = 51/139 (36.69%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 10 LRQACSQEYPGSARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSLKVLQTFLKL---SPVIATQTTVSIVITATAEQETIVVA----TKKNSGKSP-----------------------RSKTVLILPQVHLRKPC 336
+RQAC +E A CVQ D S DSA + TYRISLRSSS+ EPR+P +V+ F+ L +P + +V+ + V A ++ GK P R T +ILPQVHLRKPC
Sbjct: 13 MRQACPREGTSGATCVQRLDGSRDSAIQTTYRISLRSSSMREPRYPLPRVILFFVGLRQPAPPRSGSPAPQLVLVFLGDIPRRVPARGHRARRARGKRPAGAEEAASASRAAICHACNGRVFREATTMILPQVHLRKPC 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23640.6387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23640.6387.1 >prot_H-paniculata_contig23640.6387.1 ID=prot_H-paniculata_contig23640.6387.1|Name=mRNA_H-paniculata_contig23640.6387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MRGLRQACSQEYPGSARCVQSFDDSLDSASRKTYRISLRSSSLGEPRHPSback to top mRNA from alignment at H-paniculata_contig23640:119..640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23640.6387.1 ID=mRNA_H-paniculata_contig23640.6387.1|Name=mRNA_H-paniculata_contig23640.6387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=522bp|location=Sequence derived from alignment at H-paniculata_contig23640:119..640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23640:119..640+ >mRNA_H-paniculata_contig23640.6387.1 ID=mRNA_H-paniculata_contig23640.6387.1|Name=mRNA_H-paniculata_contig23640.6387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig23640:119..640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |