prot_H-paniculata_contig23623.6383.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23623.6383.1
Unique Nameprot_H-paniculata_contig23623.6383.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length84
Homology
BLAST of mRNA_H-paniculata_contig23623.6383.1 vs. uniprot
Match: D7FS86_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS86_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.790e-26
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    1 DSFGSIFGDLFRGVVAVGGGGGILNDVVDFLENRVDGFYSDTSIEFEDLMSSNNQDEMKAELENTRLLLEQLRKRRQQLDLDR 83
            DSFG IF DL  G+ +VGGGGG+LNDVVDFLEN+VDGF SDTS+EFEDLM+S N  EMK ELENTR LLEQL+ + ++L +D+
Sbjct:  184 DSFGDIFRDLVGGIASVGGGGGVLNDVVDFLENQVDGFSSDTSLEFEDLMASRNLQEMKEELENTRFLLEQLKMKSRKLGIDK 266          
BLAST of mRNA_H-paniculata_contig23623.6383.1 vs. uniprot
Match: A0A7S1BW14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BW14_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.240e-9
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 DSFGSIFGDLFRGVVAVGGGGGILNDVVDFLENRVDGFYS--DTSIEFEDLMSSNNQDEMKAELENTRLLLEQLRKRRQQLD 80
            DSFG+IFGDL R V +  GG G+ +D+VDFLEN VDGF S  D   + E L+      E++AELE+  +L++QL  + + +D
Sbjct:  242 DSFGAIFGDLLRSVSS--GGSGVFSDLVDFLENNVDGFKSGYDNDPDLERLLILGTLAEVRAELEDVEMLVQQLTTKAKDID 321          
BLAST of mRNA_H-paniculata_contig23623.6383.1 vs. uniprot
Match: A0A7S2RUY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUY7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.560e-8
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 DSFGSIFGDLFRG---------VVAVGGGGGILNDVVDFLENRVDGFYSDTSIEFEDLMSSNNQDEMKAELENTRLLLEQLRKR 75
            DSF  IFGDL +G         V    G  G+LND+V+FLE +VD F  ++  + E+L+ S + +E++AE+E TR LLE + KR
Sbjct:  177 DSFSQIFGDLLQGFVGGAVRSGVTGTMGARGVLNDLVEFLEAQVDDFSEESPEDLEELLESGSVEEIEAEIEATRTLLEAVEKR 260          
BLAST of mRNA_H-paniculata_contig23623.6383.1 vs. uniprot
Match: A0A6V1TPP7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TPP7_HETAK)

HSP 1 Score: 49.3 bits (116), Expect = 5.240e-5
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   26 DVVDFLENRVDGFYSDTSIEFEDLMSSNNQDEMKAELENTRLLLEQLRKRRQQLDLDR 83
            D+V FLE  VDGF SDT++EFE+LM S N  E++ E+E   LL  QLR R   L  DR
Sbjct:    2 DLVSFLEKGVDGFSSDTTVEFEELMFSTNLKELELEMEAADLLAGQLRGRATGLARDR 59          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23623.6383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS86_ECTSI1.790e-2668.67Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A7S1BW14_9STRA6.240e-946.34Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2RUY7_9STRA5.560e-842.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1TPP7_HETAK5.240e-553.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23623contigH-paniculata_contig23623:834..3598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23623.6383.1mRNA_H-paniculata_contig23623.6383.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23623 834..3598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23623.6383.1 ID=prot_H-paniculata_contig23623.6383.1|Name=mRNA_H-paniculata_contig23623.6383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
DSFGSIFGDLFRGVVAVGGGGGILNDVVDFLENRVDGFYSDTSIEFEDLM
SSNNQDEMKAELENTRLLLEQLRKRRQQLDLDR*
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