mRNA_H-paniculata_contig10986.638.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A6H5JNX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 6.020e-127 Identity = 201/254 (79.13%), Postives = 225/254 (88.58%), Query Frame = 2 Query: 128 VSRYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL-FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886 + RYRA+GR MVKCL EGRRIGSRLAPS+FKF+TGT TLRDLQD+D +F+ LKW+LANT RD+ F F++VG +KGPVT+GNKAEYV+A+ARLILVGSR PALEALK GFA ALRDLS +A F+ LSHADWRVLLCGEEH+SGPQVVAVL WY FP SEVP W++SLLLSLPEDALRRFLIFVCGTPSLPA +AGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDK++VL HKLLQA+NNTASFDVV Sbjct: 1712 LGRYRAIGRLMVKCLLEGRRIGSRLAPSVFKFITGTDTTLRDLQDFDSQSFESLKWMLANTGMRDMGFDFEDVGLPDKGPVTDGNKAEYVSAKARLILVGSRRPALEALKAGFAEALRDLSPGAALFLELLSHADWRVLLCGEEHVSGPQVVAVLTWYGFPASSEVPTWVKSLLLSLPEDALRRFLIFVCGTPSLPAPSAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKESVLRHKLLQAVNNTASFDVV 1965
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: D8LAX6_ECTSI (Outermembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX6_ECTSI) HSP 1 Score: 234 bits (598), Expect = 4.490e-66 Identity = 122/203 (60.10%), Postives = 146/203 (71.92%), Query Frame = 2 Query: 128 VSRYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL-FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKV 733 + RYRA+GR MVKCL EGRRIGSRLAPS+FKF+TGT TLRDLQD+D +F+ LKW+LANT RD+ F F++VG +KGPVT+GNKAEYV+A+ARLILVGSR PALEALK GFA ALRDLS +A F+ LSHADWRVLLCGEEH+SGPQ P P W + +L LP L +F G +P + G+V Sbjct: 1587 LGRYRAIGRLMVKCLLEGRRIGSRLAPSVFKFITGTDTTLRDLQDFDSQSFESLKWMLANTGMRDMGFDFEDVGLPDKGPVTDGNKAEYVSAKARLILVGSRRPALEALKAGFAEALRDLSPGAALFVELLSHADWRVLLCGEEHVSGPQGGGGFPLVGVPGWQGGPHWGKVFVLLLPGRPLGTVFVFGVGDALVPGSFRGQV 1789
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A835YG59_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG59_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.500e-61 Identity = 122/280 (43.57%), Postives = 148/280 (52.86%), Query Frame = 2 Query: 137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL------FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVE------------------------ITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886 Y +GRA+ CL+ GRR+G LAPS F++VG G VT GN+A++V A+ R ILV SRE AL A G L DLS + M L+ ADWRVLLCG+ H+S QVV+ L+WYNFP S VP+W+ +LLLSL ED LRRFL+FVCG+PSLP A+ ITVRCQPRSAALP AHTCF LDVPDY +A L KLLQA+ A+FD+V Sbjct: 227 YELLGRAVALCLYSGRRVGGALAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSFEDVGDPGGGAVTAGNRAQFVQAKVRHILVASREAALAAAAAGVTRGLADLSPEAPSLMRLLAPADWRVLLCGDTHVSSAQVVSALRWYNFPPASGVPRWLPALLLSLGEDTLRRFLVFVCGSPSLPPASGSXXXXXXXXXXXXXXXXXXXXXXXXFAVITVRCQPRSAALPVAHTCFLHLDVPDYASEAALRRKLLQAVTEAATFDLV 506
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A7S2WLZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLZ2_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.600e-55 Identity = 112/259 (43.24%), Postives = 158/259 (61.00%), Query Frame = 2 Query: 137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLT---------GTQP-TLRDLQDYDPVAFDGLKWVLANTVTRDL-FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFD 880 YRAVGRA+VKC +EG+RIGS A ++KFL G +P L DL+ +DP L W+L NT L F+++ V++ NKAE+V +AR +LV R LEA++ GF A+ DLS + PF+ LS ADW VLLCGE++++ V L++ FP S++P+W+ +L D LRRFLIF G+PSLP AA+ I V+ S +LP AHTCFF+LD+PDY +++ KL++A+ A+FD Sbjct: 1362 YRAVGRAVVKCFYEGKRIGSHFANCLYKFLAHGQEVKHAKGIEPRALDDLKQWDPEMGSSLDWLLRNTGAEHLGLDFEDIPGHSSQTVSDANKAEFVHMKARYVLVECRLAQLEAIRSGFWQAMMDLSPEATPFLRLLSSADWSVLLCGEDNLTPEAVTDCLEFRGFPKSSKIPKWLPQTILQFSPDNLRRFLIFCTGSPSLPPAASD-TRIGVQYNRPSNSLPVAHTCFFKLDLPDYPDQSIFVEKLMKAIQECATFD 1619
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A8J2SKZ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKZ0_9STRA) HSP 1 Score: 178 bits (451), Expect = 9.490e-48 Identity = 111/269 (41.26%), Postives = 147/269 (54.65%), Query Frame = 2 Query: 134 RYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLT--------GTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL---FHFDEVGQSEKGP------VTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEE-HISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886 R A GRA+V L+EG RL PS+FK+L G LRDLQ +DP L+ +LA F +V S+ VTE NK +V + R LVG R ALEA++ GF ALR+LS +APF+ S DWRVLLC ++ ++ +V+ L + +P RS VP +R + + +D+LRRFL+F G+P LP+A EI VR QPRS ALP AHTCFF LD+PDY + KL A+ +FD V Sbjct: 326 RLEAFGRALVAALYEGCGAPPRLGPSLFKYLAHGAAHAAAGDGRALRDLQKFDPALGASLERMLARAPPDGQGWGLDFGDVSSSDDDAGGGARAVTEANKHAFVVLKVRRALVGRRRDALEAIRRGFVAALRELSPEAAPFLKLFSSTDWRVLLCADDDRLTPDRVLDALAFVGWPKRSVVPDALRRSVRAFDKDSLRRFLVFATGSPGLPSAPG--FEIQVRAQPRSPALPVAHTCFFHLDIPDYADEGEFVAKLTTAILECGTFDRV 592
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A7S3JMR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMR1_9STRA) HSP 1 Score: 164 bits (416), Expect = 8.730e-42 Identity = 106/291 (36.43%), Postives = 154/291 (52.92%), Query Frame = 2 Query: 128 VSRYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLT--------GTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFH----FDEVGQSE----------------------KG---PVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPE-DALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886 +++ A+GRA+V +EG + S LAPSIFKFL G LRDLQ +DP L+ +LA+ F FD++ +E KG PVTE NK ++V + R IL G R +L AL GF AL +LS ++P + LS DWR+LL +++++ +V+ L + FP S +P+ ++ + S D+LRRFL+F G+P++P + I VRC P S ALP AHTCFF LD+PDY+ + K A++ +SFD V Sbjct: 1412 LAKMHAIGRALVTACYEGCGVPSTLAPSIFKFLARGSRHVAAGDARALRDLQKFDPSLGASLENMLASVPPDGSFDWGLDFDDITGTEEDRDHEDDDQRAFPHSSASSPRKGRPRPVTEANKHQFVVLKVRWILTGCRVESLNALGQGFHTALSELSPEASPLLKLLSSTDWRLLLTADDNLTPERVLDTLDFVGFPKTSIIPEALKRTIESFSNTDSLRRFLVFTTGSPTIPNDGRD-LRIQVRCLPLSGALPVAHTCFFHLDIPDYEDEGTFITKFTMALHECSSFDRV 1701
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: D3B9B5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9B5_POLPP) HSP 1 Score: 127 bits (318), Expect = 8.460e-29 Identity = 78/245 (31.84%), Postives = 126/245 (51.43%), Query Frame = 2 Query: 137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKGP---VTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMN 862 Y+ +G+ +K + +G+ I PS FKFL P L+DL+ YDP K VL G E G VT+ NK +++ IL+GSR+ L+A K GF + ++A F F S + ++L+CG + + + +K+ FP S+ P+ S++ ++ +D L RFL F+ G +P K +++ P+S LP AHTC +QLD+PDY +L+ K+LQ ++ Sbjct: 1379 YKTLGKIFLKAIIDGKPIPDAFPPSFFKFLLNISPNLQDLEAYDPQLGQSFKKVLLLDNIDQYLSTTFEGLVENGDEILVTDDNKEDFIQKNIDKILIGSRKYQLDAFKSGFMS----IESLNAHFALF-SPTELQLLMCGNQLVDAELLKRHIKFVGFPASSDTPKHFLSVIDAMTQDELHRFLRFLTGMVVIPMQGLEK-PLSIIHIPKSEKLPCAHTCSYQLDLPDYSNFELLKKKILQMLD 1617
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: F0ZPV0_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPV0_DICPU) HSP 1 Score: 120 bits (300), Expect = 2.010e-26 Identity = 76/253 (30.04%), Postives = 123/253 (48.62%), Query Frame = 2 Query: 137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKGP---VTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886 ++ +GR +K + +G+ I PS FK+L +P L+DL+ YDP K VL D G E G VT+ NK +++ +LV R+ LEA K GF + ++A F F S + ++L+CG + + K+ FP S P++ ++ + +D L FL F+ G +P K +++ P+S LP AHTC +QLD+PDY+ +L+ KL+Q + F + Sbjct: 1473 FKVLGRVFLKAVIDGKPIPDVFPPSFFKYLLNIKPNLQDLEVYDPQLALSFKKVLVLDNIEDYLTTTFEGLIEGGENIEVTDSNKEDFIQKNIERVLVDCRQSKLEAFKSGFMS----IESLNAHFALF-SPTELQLLMCGNTLVDASVLQKSFKFIGFPDSSNTPKFFCKVIEEMSQDELHLFLRFLTGMVVIPLQGLEK-PLSIINVPKSEKLPCAHTCSYQLDLPDYNDLDLLKRKLIQMLEWVEGFGFI 1719
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: SPKUL_DICDI (Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SPKUL_DICDI) HSP 1 Score: 119 bits (299), Expect = 2.760e-26 Identity = 79/250 (31.60%), Postives = 122/250 (48.80%), Query Frame = 2 Query: 137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKG---PVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASF 877 ++ +G+ +K + +G+ I S FK+L G + LRDL+ YDP K VL + G E G PVT+ NK E++ +LVG R+ LEA K GF + ++A F F S + ++L+CG + + K+ FP S P+ R + + +D +R FL FV G +LP + K I++ P S LP AHTC +QLD+PDY+ + KL++ + F Sbjct: 1641 FKILGKIFLKSIIDGKPIPDCFPTSFFKYLLGVKVNLRDLEIYDPQLAQSFKKVLVLDNIEEYLSTTFEGLIEGGESIPVTDLNKEEFIQRNIERVLVGCRQSKLEAFKSGFMS----IDSLNAHFALF-SPTELQLLMCGNTLVDSSVLQKNFKFIGFPDTSSTPKDFRRAVDEMNQDEIRLFLRFVTGMVALPLSGFEK-SISIIQVPLSQKLPCAHTCSYQLDLPDYNDFDTTKKKLIKMLEYVDGF 1884
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A8J4PNL3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PNL3_9MYCE) HSP 1 Score: 113 bits (283), Expect = 3.430e-24 Identity = 68/244 (27.87%), Postives = 126/244 (51.64%), Query Frame = 2 Query: 137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDP-VAFDGLKWVLANTVTRDLFHFDE--VGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAM 859 ++ +G+ +K + +G+ I S FK+L +P ++DL+ +DP +A K ++ + + L E + E PV + NK +++ +L+G R+ LE+ K GF + ++ F F S + ++L+CG + + K+ FP+ S+ P + ++ + +D L FL F+ G +P K +++ P+S LP+AHTC +QLD+PDY+ +L+ KLLQ + Sbjct: 1386 FKILGKIFLKAVIDGKPIPDAFPSSFFKYLLDIKPNIQDLESFDPQLALSFKKVLMLDNIDEYLCTTFEGLIEDGENIPVNDLNKEDFIKRNIDKVLIGCRQSRLESFKSGFMS----IESLNTHFKLF-SPTELQLLMCGNTLVDANMLQKNFKFIGFPSDSQTPTYFSKVIEKMSQDELHLFLRFLTGMVVIPLEGLEK-PLSIVYIPKSDKLPSAHTCSYQLDLPDYNDHDILQKKLLQML 1623 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10986.638.1 >prot_H-paniculata_contig10986.638.1 ID=prot_H-paniculata_contig10986.638.1|Name=mRNA_H-paniculata_contig10986.638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp MFFPLVSLFFFSSSLCGILLVSRYRAVGRAMVKCLFEGRRIGSRLAPSIFback to top mRNA from alignment at H-paniculata_contig10986:113..4261+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10986.638.1 ID=mRNA_H-paniculata_contig10986.638.1|Name=mRNA_H-paniculata_contig10986.638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4149bp|location=Sequence derived from alignment at H-paniculata_contig10986:113..4261+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10986:113..4261+ >mRNA_H-paniculata_contig10986.638.1 ID=mRNA_H-paniculata_contig10986.638.1|Name=mRNA_H-paniculata_contig10986.638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at H-paniculata_contig10986:113..4261+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |