prot_H-paniculata_contig23590.6371.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23590.6371.1
Unique Nameprot_H-paniculata_contig23590.6371.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length120
Homology
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BLAST of mRNA_H-paniculata_contig23590.6371.1 vs. uniprot
Match: D8LKI1_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI1_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.860e-20
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0 
Query:   23 SSRSVPTMCSLRVTPDGSKVQVGVRSNESVILEYALDDW--HGPGHLRVGHEALSGSRVIDAP-QGSGGLFAVLGPDRSVQIRSWRM 106
            +S  VP++ SLRVTPD +KVQVG+  ++ +ILEY L+    H    LRVG+EAL G RV+DAP  G GGLFAV+GPDR +QIRSWR+
Sbjct:  701 TSAPVPSIRSLRVTPDQTKVQVGI--SKGIILEYELEGQASHEQAWLRVGYEALIGRRVVDAPVHGDGGLFAVMGPDRVIQIRSWRV 785
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23590.6371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKI1_ECTSI1.860e-2058.62Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23590contigH-paniculata_contig23590:577..2947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23590.6371.1mRNA_H-paniculata_contig23590.6371.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23590 577..2953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23590.6371.1 ID=prot_H-paniculata_contig23590.6371.1|Name=mRNA_H-paniculata_contig23590.6371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
MVLLRGGHRGGGGDKMGLPLSMSSRSVPTMCSLRVTPDGSKVQVGVRSNE
SVILEYALDDWHGPGHLRVGHEALSGSRVIDAPQGSGGLFAVLGPDRSVQ
IRSWRMTTGGDGKGGSGSLS
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