prot_H-paniculata_contig10985.637.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig10985.637.1
Unique Name	prot_H-paniculata_contig10985.637.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	114

Homology

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 3.860e-60
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK
Sbjct:  584 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 688

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: F0YAG5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG5_AURAN)

HSP 1 Score: 190 bits (483), Expect = 3.800e-55
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MD FN PGS KF FLLSTRAGGLGINLATAD+V+LYDSDWNPQVDLQAMDRAHRIGQTKPV VFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+NA+L K
Sbjct:  489 MDVFNAPGSEKFAFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNAALGK 593

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: A0A448YY09_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY09_9STRA)

HSP 1 Score: 192 bits (489), Expect = 5.370e-55
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MDEFN  GSSKFLFLLSTRAGGLGINLATAD+V+LYDSDWNPQVDLQAMDRAHRIGQ KPV+VFRFITEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+N SL+K
Sbjct:  304 MDEFNAEGSSKFLFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKPVQVFRFITEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNTSLNK 408

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: A0A1E7ETM7_9STRA (SNF2_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETM7_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.220e-54
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MDEFN  GS KFLFLLSTRAGGLGINLATAD+V+LYDSDWNPQVDLQAMDRAHRIGQ KPV+VFRFITEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+NA++DK
Sbjct:  369 MDEFNAEGSPKFLFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKPVQVFRFITEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNAAVDK 473

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: B7G2T7_PHATC (Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T7_PHATC)

HSP 1 Score: 192 bits (487), Expect = 1.750e-54
Identity = 94/105 (89.52%), Postives = 102/105 (97.14%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MDEFN  GSSKF FLLSTRAGGLGINLATAD+VILYDSDWNPQVDLQAMDRAHRIGQTKPV+VFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+++SL+K
Sbjct:  517 MDEFNAEGSSKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQHSSLEK 621

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: A0A7S2MKX3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MKX3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.330e-54
Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MD FNEPGS  F FLLSTRAGGLGINLATAD+VIL+DSDWNPQVDLQAMDRAHRIGQTKPV+VFRF+TEGTVE+KIVERADRKLFLDAAVIQQGRLAE+N  L K
Sbjct:   40 MDRFNEPGSPYFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVRVFRFVTEGTVEDKIVERADRKLFLDAAVIQQGRLAEQNNQLSK 144

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: F0YAG6_AURAN (Uncharacterized protein RUV1 n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG6_AURAN)

HSP 1 Score: 190 bits (483), Expect = 6.020e-54
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MD FN PGS KF FLLSTRAGGLGINLATAD+V+LYDSDWNPQVDLQAMDRAHRIGQTKPV VFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+NA+L K
Sbjct:  489 MDVFNAPGSEKFAFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNAALGK 593

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: A0A1Z5JHP3_FISSO (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHP3_FISSO)

HSP 1 Score: 190 bits (483), Expect = 6.630e-54
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MDEFN  GS KF FLLSTRAGGLGINLATAD+VILYDSDWNPQVDLQAMDRAHRIGQTKPV+VFRFITEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+++SL+K
Sbjct:  525 MDEFNRVGSPKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFITEGTVEEKIIERADRKLFLDAAVIQQGRLAEQHSSLEK 629

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: A0A7S2BNI9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNI9_9STRA)

HSP 1 Score: 187 bits (476), Expect = 8.540e-54
Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 105
            MD FNEP S  F FLLSTRAGGLGINLATAD+VIL+DSDWNPQVDLQAMDRAHRIGQTKPVKVFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+N +L K
Sbjct:  121 MDRFNEPNSKYFAFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNNNLSK 225

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BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Match: B8C3Q3_THAPS (Atpase-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q3_THAPS)

HSP 1 Score: 189 bits (480), Expect = 9.520e-54
Identity = 93/114 (81.58%), Postives = 103/114 (90.35%), Query Frame = 0

Query:    1 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDKVQKKWRIAF 114
            M+EFN PGSSKF FLLSTRAGGLGINLATAD+VIL+DSDWNPQVDLQAMDRAHRIGQTKPV+VFRFI+EGTVEEKI+ERAD+KLFLDAAVIQQGRLAE+N  L K +    + F
Sbjct:  368 MEEFNAPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFISEGTVEEKIIERADKKLFLDAAVIQQGRLAEQNTKLSKSELMQMVKF 481

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig10985.637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KHP7_9PHAE	3.860e-60	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
F0YAG5_AURAN	3.800e-55	88.57	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A448YY09_9STRA	5.370e-55	90.48	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A1E7ETM7_9STRA	1.220e-54	89.52	SNF2_N-domain-containing protein n=1 Tax=Fragilari...	[more]
B7G2T7_PHATC	1.750e-54	89.52	Imitation switch isoform 1, alias nucleosome remod...	[more]
A0A7S2MKX3_9STRA	2.330e-54	87.62	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
F0YAG6_AURAN	6.020e-54	88.57	Uncharacterized protein RUV1 n=2 Tax=Aureococcus a...	[more]
A0A1Z5JHP3_FISSO	6.630e-54	89.52	SWI/SNF-related matrix-associated actin-dependent ...	[more]
A0A7S2BNI9_9STRA	8.540e-54	87.62	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
B8C3Q3_THAPS	9.520e-54	81.58	Atpase-like protein (Fragment) n=1 Tax=Thalassiosi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 2..56 e-value: 0.0058 score: 25.5
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 1..56 e-value: 1.6E-10 score: 41.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 1..97 score: 14.089
None	No IPR available	GENE3D	3.40.50.300		coord: 1..112 e-value: 9.1E-54 score: 184.5
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 1..104
None	No IPR available	PANTHER	PTHR10799:SF879	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 5	coord: 1..104
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig10985	contig	H-paniculata_contig10985:6969..7743 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig10985.637.1	mRNA_H-paniculata_contig10985.637.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig10985 6966..7743 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig10985.637.1 ID=prot_H-paniculata_contig10985.637.1|Name=mRNA_H-paniculata_contig10985.637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMD
RAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKN
ASLDKVQKKWRIAF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR027417	P-loop_NTPase