mRNA_H-paniculata_contig23578.6368.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: D8LKL7_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL7_ECTSI) HSP 1 Score: 174 bits (441), Expect = 2.900e-51 Identity = 81/111 (72.97%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVKVCT 333
V GIVGLAADPDFTENLL+RYLP++ + EI EKGVAT+ WG +YPVSK L++D + NLVL+GPVGGL I+CPVRL+HGL+DEEVPYTVSLDLSRR+ S+NVNLYLVK +
Sbjct: 215 VGGIVGLAADPDFTENLLMRYLPKAKIDEIYEKGVATIAWGERSYPVSKVLIEDAKDNLVLEGPVGGLPITCPVRLIHGLNDEEVPYTVSLDLSRRIQSSNVNLYLVKTAS 325
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A836CDS8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS8_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.310e-38 Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVK 324
V+GIVGL ADPDFTENLL ++LPE T EI EKG + VTWG YP+S+AL++DGR++L+L GP GL I CPVRLVHGL DEEVP V L L+RRL + NV + L K
Sbjct: 92 VAGIVGLGADPDFTENLLWKHLPEETKTEIMEKGSSQVTWGIHQYPISRALIEDGRRHLLLGGPDNGLDIMCPVRLVHGLQDEEVPLDVPLSLARRLRTQNVQVLLQK 199
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A6S9KBJ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KBJ4_HETAK) HSP 1 Score: 127 bits (319), Expect = 2.710e-33 Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVK 324
VSGIVGLAADPDFTE+LL++YL E + +I E GV T+ WG ++YP+SK LL+DGR+NLVL+G L I+CPVRLVH + DEEVP++ ++ L+ + +V + L+K
Sbjct: 195 VSGIVGLAADPDFTEDLLMKYLSEDEINKIMENGVHTIKWGATSYPISKRLLEDGRENLVLRGAKSSLNITCPVRLVHSMADEEVPFSTAVRLASCIKGNDVKINLLK 302
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A7S0SVD6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVD6_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.090e-31 Identity = 53/111 (47.75%), Postives = 79/111 (71.17%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVKVCT 333
V+GI+GLAADPDFTE LL + L + ++I +GV +TWG YP+++ L++DGR+NL+L G G + + CPVRL+HGL DEEVPY +++ L L S++ ++ L+K T
Sbjct: 5 VAGIIGLAADPDFTEELLWKKLSDEVKQKILNEGVYEITWGHEKYPITRNLIEDGRKNLLLTGAPGSVNVRCPVRLIHGLSDEEVPYQLAVQLVDNLASSDASVVLLKKST 115
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A5J4YWA8_PORPP (Mycophenolic acid acyl-glucuronide esterase, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWA8_PORPP) HSP 1 Score: 118 bits (296), Expect = 6.330e-30 Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVK 324
V G+VGL+ADPDFTE LL+ L E+ +E+D KG+ +TWG YP+SK L+DDGR LVL G L I+CPVRL+ GL DEE+P T L++ ++ ST+VN+ VK
Sbjct: 192 VVGLVGLSADPDFTERLLMPALSETQREELDSKGIIDLTWGYRKYPISKKLVDDGRNMLVLTGEKDSLPITCPVRLIQGLADEELPSTFPLEIVEKIRSTDVNVTFVK 299
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A7S4E1S8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E1S8_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.730e-29 Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVK 324
V G+VGLAADPDFTE+LL++ L ++ I + G+ + WG +YP+S+ L++D R +L+L+GP GGL + CPVRL+HGL+DEEVPYT ++ L+ R+ + +V + L K
Sbjct: 175 VGGVVGLAADPDFTEDLLLKRLKPDVIERIMD-GMELIKWGDCSYPISRKLIEDARDHLLLKGPDGGLDVQCPVRLLHGLEDEEVPYTTAVRLANRIKTEDVTVSLSK 281
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A6S8DHT4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8DHT4_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.140e-28 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNV 306
V GIVGLAADPDFTE+LL++ LP+ T+ I V V WG YP++K+L++D R +L+LQGP GL I CPVRL+HG DEEVPY ++ L+ R+ + +V
Sbjct: 204 VGGIVGLAADPDFTEDLLLKGLPQETIDSIMTGKVHEVKWGDRVYPITKSLIEDARNHLILQGPERGLPIKCPVRLLHGTRDEEVPYQTAIRLAERIETDDV 305
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: F0Y7X5_AURAN (Uncharacterized protein HDR1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7X5_AURAN) HSP 1 Score: 112 bits (279), Expect = 2.070e-28 Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQN-LVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVK 324
V G+VGLAADPDFTE LL++ LP+ + I E G+ VTWG TYP++KAL++D R++ L+L GP L I CPVRL+HGL DEEVP+ + L++R+ + +V + L K
Sbjct: 82 VGGVVGLAADPDFTEELLLKRLPQDVIDRIME-GMEEVTWGDKTYPITKALIEDAREHHLLLDGPERTLPIQCPVRLLHGLMDEEVPFDTCVRLAQRIETEDVTISLSK 189
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: A0A7S0WCK8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCK8_9CRYP) HSP 1 Score: 108 bits (269), Expect = 1.280e-27 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKALLDDGRQNLVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVKVCTPVL 342
V G+VG+AADPDFT +L++ L E TLK I+E+G +T+TWG S Y +SK +DD +NLV++G L++ CPVRLV GL DEE+P +L L L + +V + K + VL
Sbjct: 17 VRGLVGVAADPDFTTDLVLPTLSEETLKRIEEEGSSTITWGNSEYTLSKVFIDDAEKNLVMKGGPSSLKVRCPVRLVQGLGDEEIPAERALTLCDVLETDDVVVSYTKFGSHVL 130
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Match: F0YFN0_AURAN (Uncharacterized protein HDR3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFN0_AURAN) HSP 1 Score: 112 bits (279), Expect = 1.540e-27 Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 1 VSGIVGLAADPDFTENLLVRYLPESTLKEI-DEKGVATVTWGRSTYPVSKALLDDGRQN-LVLQGPVGGLQISCPVRLVHGLDDEEVPYTVSLDLSRRLGSTNVNLYLVK 324
V G+VGLA+DPDFTE LL++ LP+ + +I + G+ V WG TYP++KAL++D + N L+L GP L I CPVRL+HGL DEEVPY V++ L+RR+ + +V + L K
Sbjct: 176 VGGVVGLASDPDFTEELLLKRLPQDVIDKIMGDDGMDQVHWGGKTYPITKALIEDAKDNHLLLDGPDRVLPIQCPVRLLHGLYDEEVPYDVAVRLARRIETEDVTISLSK 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23578.6368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23578.6368.1 >prot_H-paniculata_contig23578.6368.1 ID=prot_H-paniculata_contig23578.6368.1|Name=mRNA_H-paniculata_contig23578.6368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp VSGIVGLAADPDFTENLLVRYLPESTLKEIDEKGVATVTWGRSTYPVSKAback to top mRNA from alignment at H-paniculata_contig23578:129..2573+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23578.6368.1 ID=mRNA_H-paniculata_contig23578.6368.1|Name=mRNA_H-paniculata_contig23578.6368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2445bp|location=Sequence derived from alignment at H-paniculata_contig23578:129..2573+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23578:129..2573+ >mRNA_H-paniculata_contig23578.6368.1 ID=mRNA_H-paniculata_contig23578.6368.1|Name=mRNA_H-paniculata_contig23578.6368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig23578:129..2573+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |