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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 982 |
| Cds size | 519 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2355.6360.1 >prot_H-paniculata_contig2355.6360.1 ID=prot_H-paniculata_contig2355.6360.1|Name=mRNA_H-paniculata_contig2355.6360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MNDRSGRRDGEQITYSSIPPLPRPLSASCSSQWHLIVIPTDISSFLSASF
CTTIVSAKAEYRVLEERRNDPFLQKVLAARNFQLERQPFQDPYIYQYGLL
PEQCVPRRDDPQFYIHPCDEMDAKLPESLVQKAAASAKHHLPGSFRRKVL
PWDGTRKNVTAPILWRAREPLF* back to topmRNA from alignment at H-paniculata_contig2355:1884..8429- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2355.6360.1 ID=mRNA_H-paniculata_contig2355.6360.1|Name=mRNA_H-paniculata_contig2355.6360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6546bp|location=Sequence derived from alignment at H-paniculata_contig2355:1884..8429- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTGGAGTGACCGCTTCTCCTGTATGTACGAGATGACCACCGTCTGCTGC
TGCAGCAAAAAGACATAGCCAAATGTCATCATCAGGTCTAAGTGGAGAAG
AATTATTCATTCCACCGAGGCCAGCCTCTAAGCTGAGCAGGCCTAGGCAT
GAACCGATGCTAGATTCGATCCAAGCTTCAACACTAGCTGAAGTTCCAGA
AAGGAATGAACGACCGGTCAGGTAGGAGAGACGGAGAGCAGATCACATAC
AGCTCTATCCCACCATTGCCGAGACCTCTGAGTGCCAGTTGTTCCTCACA
GTGGCACCTTATAGTTATACCAACTGATATTTCGTCATTTCTCTCCGCCA
GCTTCTGCACGACTATTGTGAGCGCGAAGGCTGAGTACCGGGTCCTGGAG
GAAAGACGAAACGACCCGTTCCTGCAGGTAGGTACACCTACAGATGAAGC
TAGTTGCGTACCCACCTTAACCATAATAGTATACTCCCTCTGTGCCAAAT
TTGTTCATATCTTTTGTCAAAATTGGGATTCAAAAACTTCGAGCACATCA
TTCGAAAGCCCACAACTTCACCTTGCACACTTATACCCCCAAAATAAATT
TTCAACCCAAAATAATTGAGAAAATGGTGTCTGAACCTTTTCTTCTGTTT
TTTGCAATGGCAGCTTTGTGAGAAACAGGAAAATCGACAAAAAAACGGCT
AAAAACGATGATAGCGTCTCAACGAGACCTCCGATGAAAACAATATGTTT
TTTGCGTTGGATTCCTTGGCATCTCCTAGACCAAATTCAATATCGTTAAC
TCCCGTCCTCTCCATCAACCCACCAATTCAGCGCCGCGCCGAAAGCGTCT
CTTTCTATCATGATGAATTGCTCCAGGACCCCCTTACGATGCCTTTTCCT
CGTCCCGGTGCGCTCAACCTTAAAGTAGTTCTCCCCGGAGTGTTCTCAGC
TCTTGATTGTACATTTTGAAGAGACTCCGCTATACCCTCTCGAACGTTTC
CGTGTCATACTCGCCATGCATTAGGGCTCCCGCCACACCCTACTTTTCAA
CGCGAAGAATCCACTCCCCGGACAACTGTCAATACTTGGCGTATTTTCTT
CGAAAAATAATAAGTATTTGCCTGAGTTTCAGAATGAGCAGATGCATAAG
TACAGTACCCACCCCCGCCCACTCGATTTACGAGTATTGCGATGGGGACG
GTTTTAAGAGCATCCTAAAATCAGATAGATATTGGGTTAACCTATACCTT
TAGCTTAAGGGATCAATATGACACTTGGCGTCACCTTGGACTAGGGTTCG
CTTCTTCGTAATCGTACTTCTTCTTCGTACCTATCCCGCTGTTATATGTC
CATTTCACACTACTACCCATTACCCCGAATACCCGTAGAGAACACCGACG
GGGGCACAGAGTGGGGGGCCGTTAGGACTCTGCGGGCGTTAAGGGGGGGA
AAGTATGGTGGAGACGGTCTTACGAGCATCCTAAAAGCAGATAGATACTG
GGTTAACCTATACCTTTAGCTTAAGGGATCGATATGACAATATTATTAGC
AGTTGCGGATGGTCCGGGGCACATAAAACACACGAGCTCATTCTGAAACC
GAGGGGAATACTTGTAATTTTTCGTCGCGAATACGCCAAGTATTCGTGTT
TGTCCTGAGGATAGATCCCAATCGTTGATGTTGAGATCTGGAGACCGCAC
AGGCTGCGCTACGAGCCCGATACTCCATTCACCCTCCCTCCCTACTTGTT
TTAGCTTGGGCGGCGTGCCTTTACCCTTCTGGGGGCTCGCGCCGTCGGCA
GGAAATCGTCTGTTTACCACTCCTGCGGCGTGCCTTTACCCGTCTGGGGG
CTCGCGCGTCGGCAGGAGATCCTCCGTTTACCACTCCTGGTACTAATCGC
TCTCGATGGCTACATCGAACTCGTACTCATCGCTTCTTTCGGGGCGGGTG
ATGTTCCGCTTCGCCTGAGCGACGACGGACTATTTGGGGTGGCCATGTGG
GTGATGGTGCTTGGCCCGCGAGTAGTGTGAGAGATGTGGGGGCGGTAAGC
AATTCGAGGACGCAGAACGGCCATTCAAAAGTGAGCCGAAAACGTCACGT
GGAATCTACTCCTGGTACTTACCGGATTCTAGTTCGAACAACGTCAGAAC
AGATCATACGAACCACCTGAGTCGAGAACATTCGAATCACCTCAGACTAG
ATACTTGTTTCACATTGTTTTGATTCAAGGATCATCGGAGATCTCTATCA
ATTTTTGAGACAATATCGCCGATTAACCATTATTTTTGGTCATTCTTAGT
CGATTTTGTTGTTTCTCAAAACTTGAAGTTTCGAAAAATGAATGAAATTA
GATACCATTTCCTCAACTATGTTGTATTGAAAAAATTATTTTGGCGATAT
CTGCGTGCAAGCTGAAGTTATGGGCTTTCGAATGATATGCTCGGAGTTTT
TTGTATCTCAAATTTGACAAAGAAATGAACAAATAGCCACAACGATACAG
ACTTATGGGACAGAGGAAGCATATGCATACGTAATATGTAGTCGCACCAT
TGCTTACCCAGTACCCATGTGCGATAGGTACATACGTATGTGCACTCATG
GTGTTGCAATGGATACATGTAGCAGATACGGCTCTGATATCAATACGTTT
AAGGTAATAATGAGTGACGCCAGATGGACTCGTCGTGGCAACATAGCAAA
AGAGCTGACTGCGCCAAAACGTGTTTTATTCGAAAATGTGCACACACGCC
ATTGGATCTTTGCAAAGCAGGACGCTAGTACCACACATACCCGATAAAGG
TGGGATCGGATCGACGCAACCCATCAACCATTTGCCTGTCCTCGTCGTCC
GACCCGAGCTTACAGAACCCCAGATGATGACCCCTGACTTTTTTACGTGC
CAGCCCGTTTCGCCATCTTCTCGAGGATCATCGGTCCCGCTACATGTACT
ACTTCTGTATGTCGGGGTGCAACATATTCGAAAAGTGAATAACTCCCTCT
GTCCCACAAGTTTGGTTGAGGTTGGTTCTACCTATAGTCGTAACTATCGC
AAGGTTTAAGCATGTAGCTCGAAAGACCACAGCATATGCTTGCACATACA
TGTCGTCGAAAATACATAAAATCGAAATATATGAGAAGATGTCCTTTCAA
CAAGTGTTATTTTCGGGAATGAAAGGCAGTTTCTGCAAAAACAGGAAATT
TGGAGTCTTGACATTATTTGACGTGACTCATGAGTACCCATAGATACCCA
TGGGTCACTCATGAGCGCCCACGGGTCCCGATAGATCAACGCACGGAAAT
CCATGCCCAACTCATTGGCACCCGCGAACAACTGTACGCAATCCATGCGC
TGACCAATGGGTCGACCCATGAGCGCTCGTGAACAACCGTGAATGCTCAT
GGGTGATTGCGGGTCTCGTGGGTGCCCATGAATTACCTACGGGCCGTCAT
GGGCAGCTATGTTGGTCGCCATTGCAACGCACGGGAACTCGTAAAAACGG
CCAAAAATATGGAATTACGTCAAATAGTATTCAGGGGATTTTGGACTTGT
GTACAAAATCTGCGTAGCACATGGCGACTCATAGCGACCCACCTAATTTT
TAAGCCCGTTTTTATTCCCCATGAAAACGTTGAAAAACAATTCAAACCCC
ATGTTCCTCCGCTGTTCACGTGTTTTGAGATAGTTTCAGCAGTCAAAACC
TGTTCACCGGGGTTCGAAGTCGTGCAATCTGCTTGCATGGTGGTCACCTC
TGTCCATTTGTAGACCACTTGCGTTCCTGCTGCAGACCCCACGCTTGTTG
GTACATCTACTCGTGAGTCTAACCCTAACCCCAATCCACACTCCAACCCT
AATCCTAATCCTACACTCAAGCCGTCGACCCTAGTGTGCGTAGCAGAGCG
TACATCTGACCTATCTGCGTTTCTAACCCACCTGGCCTACATTTGTTGGT
AGAGTACGTGCTTGTACGTTGGCAGAGGATGCAGCTTCGTTTTTTTGGTG
CTTTGTCATGCGGATGTCTGTGCTCATGAATGGCTACGGGTACCCGGAAG
TGACCCATGAGTACCCATTGGTTAGATCATATAATTTTAACACCTGAACA
TTTTGACCTAAAACTTCTGGAAGGGCACTTCTATGGCAATAGCATCGCAA
CGAGATCTCTGAGAACGAAACGGAGTGTTGCGCTGGACCCCTTGTCAAAT
TATAGACTAAAATCATGACATTATATTCTCTCACGAAGCACTATGGCCTC
TTCCACGGCACGATGTGAATGTGGAGCAGCACACGAGACGTAGCGAAAGG
AGAAGGTTGAGTGGTGTTGTGAAAATCGACCAAGCATTGCTGTTTCATGC
AAAAATCGTCTGATGGTGTTAAACTGAGGATCAAATCAAAATTACCGAGG
AATCCAACGTAACAGACGGTTTTACCATCAGAGAGCCCGTTGCAACGTTG
TAGCCATAGCCACAAAAGCGCCAGTCCAGAATTTTTACGACGAGCTTTCT
GTTTGTATTTTGCTTCCGTATCGTTGGTCATTACTGTGTAGTCACCCCCC
AGCAGGGGGGGAGTGGAAACCTTGGGAAAGCATCTCCCCCAAAACTCACG
ACATTACAAAGGAAAGTCCGGTCACACCAACTGGCGGCAAACGGCCAGCC
TCCACTACACTACATATTACCCTCTGTCTCCCCGAAAGCAAAAGGGAGGG
ACGGTGGGAAAGAACAACAGTAGTAGGCTTGTACCCTGTACAGGGGTCAC
CATTCAACTATCGTTCCAACAAGGTCATCTCGCGTTGTACCGCGCCCCTG
AGCTCTGTTGCAGTCAAAACGTAGAATGACTAAGGGGAGGGGCTACACTT
TTCCGAGATGATGCAAATCTAGAAACTAGAAACACCCGCGAAATGCTCCG
TGAAATTTTCCATGGGACTCTTCTCGACACCTCTCCTCGAAACTCCTTGC
ATAAATAGCCCGGTACTCTTCGCACGTACAAACATCAGATTCCTGGAACC
TTTCATTTTTCGAAAAAACTGTTATTTCTGAAAACAAAACACGGGACAGG
ACAATTTCTTAACCTTTTCGAATCGTTTTATTTGTCTACATTTTGTACAA
GTCGATGGATATTTTGGGCTTTAGAGCGGTGTGTGGATCAGAGGCAGTAT
CTGGAGCCCTTAGCGTCAAGTGATCGCCATGTTGGCATTCGTCTCGGGCT
GCAGTTTCAACCCGCCGGGAAACATCGTATGGCCACAAAGTTGTAAACAT
ACACGGTGATTTTTAACCCAGGGTTGGTCATCACCATCACGACGTGAACC
TAATTTTCGTGACAGTAAGGTAGGTACATACACCGTACCTTCTTTAATTT
GTCGGTCATCCAAGGTGTGCTGGGTTCTTCTTAAAAAGTACCCAGTATAC
TTCTTGAACGGAGAAAGCGTGATGAATATGCACTAACGTTTTTTCCACAA
GATGTCTTGCGGGTCCCTATATGTGATACCGTTGTGTCCACGAGCTGCTA
AATCCACGTGCAACTTTCCCTCTCCGCAACGGGTCGACTTTACCGTCGAT
CGCCAGAAAGTGCATAGTAGTCCGTATTTTTGGCCATTGCCGTAGTTCTA
TCTCAACCTCATATGCCCCCGTCGTGAATGCAGTCGTTTTGTATGTGCCA
TATGTTCGGGAGCAGAAAGTCTTGGCGGCGCGGAACTTTCAGCTGGAGCG
GCAGCCCTTTCAGGACCCCTATATCTACCAGTATGGCCTCTTGCCAGAGC
AGTGCGTCCCCCGAAGGTACGGCCGATTGTTGATTTGTATGCACGTAGCT
TTTTATCCAATAAAGGCCTTGTTATTGAGTGATCTTCATAGCTTAGCACT
ATCGCGGCTACTGGTATGGGCCCAATATCCCGACTCTCACATTCCCGATT
TTTGAGTTCCTTTGGATTATTTCATATCTTATTAATTTGCTGCACGTCTC
CTCGAGCAGACCTGGTGCTTGCACTTAGCAGGAATGCCAAGCTACCACCG
TGAAGTTTGCGCACATCGCTCTTGCTAGGTTCGCCTGAAGCCGAAGATGC
TAGGGTCGGTAACCTGACCCGTCCTTGTGTTACCTACCGCAGGGATGATC
CTCAATTTTACATTCACCCATGCGACGAGATGGATGCCAAGCTTCCAGAG
TCGCTGGTGCAAAAGGCAGCTGCAAGCGCAAAACACCATCTTCCTGGCTC
TTTCAGACGCAAGGTGCTTCCATGGGATGGCACGAGGAAGAACGTCACTG
CACCAATTCTATGGCGAGCTCGAGAACCGCTATTCTAAAACATATTAGAA
ACCACGCGAGCTAGCGAAATTGATCGGTTTGGCCTATGGTCGGTGTCAAC
AAAAACTGCGCTCGCGATTGATACTTAATCAAAACTAGGTACAGTACCCG
TATGTTCGACATCCAGTCAGTTGCTAGTTTTCTGGGCAGCTCACTCGCAG
TCACGACCATAGAAGAATTGGGTTAGATCCCACTCGCTCACTCAGTGGCG
CGCTCCGTGCAGTCATCAATAGCTCTCGGTCGTTCACGTTGGGGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2355:1884..8429- >mRNA_H-paniculata_contig2355.6360.1 ID=mRNA_H-paniculata_contig2355.6360.1|Name=mRNA_H-paniculata_contig2355.6360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig2355:1884..8429- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGACCGGTCAGGTAGGAGAGACGGAGAGCAGATCACATACAGCTC
TATCCCACCATTGCCGAGACCTCTGAGTGCCAGTTGTTCCTCACAGTGGC
ACCTTATAGTTATACCAACTGATATTTCGTCATTTCTCTCCGCCAGCTTC
TGCACGACTATTGTGAGCGCGAAGGCTGAGTACCGGGTCCTGGAGGAAAG
ACGAAACGACCCGTTCCTGCAGATGAACGACCGGTCAGGTAGGAGAGACG
GAGAGCAGATCACATACAGCTCTATCCCACCATTGCCGAGACCTCTGAGT
GCCAGTTGTTCCTCACAGTGGCACCTTATAGTTATACCAACTGATATTTC
GTCATTTCTCTCCGCCAGCTTCTGCACGACTATTGTGAGCGCGAAGGCTG
AGTACCGGGTCCTGGAGGAAAGACGAAACGACCCGTTCCTGCAGAAAGTC
TTGGCGGCGCGGAACTTTCAGCTGGAGCGGCAGCCCTTTCAGGACCCCTA
TATCTACCAGTATGGCCTCTTGCCAGAGCAGTGCGTCCCCCGAAGAAAGT
CTTGGCGGCGCGGAACTTTCAGCTGGAGCGGCAGCCCTTTCAGGACCCCT
ATATCTACCAGTATGGCCTCTTGCCAGAGCAGTGCGTCCCCCGAAGGGAT
GATCCTCAATTTTACATTCACCCATGCGACGAGATGGATGCCAAGCTTCC
AGAGTCGCTGGTGCAAAAGGCAGCTGCAAGCGCAAAACACCATCTTCCTG
GCTCTTTCAGACGCAAGGTGCTTCCATGGGATGGCACGAGGAAGAACGTC
ACTGCACCAATTCTATGGCGAGCTCGAGAACCGCTATTCTAAGGATGATC
CTCAATTTTACATTCACCCATGCGACGAGATGGATGCCAAGCTTCCAGAG
TCGCTGGTGCAAAAGGCAGCTGCAAGCGCAAAACACCATCTTCCTGGCTC
TTTCAGACGCAAGGTGCTTCCATGGGATGGCACGAGGAAGAACGTCACTG
CACCAATTCTATGGCGAGCTCGAGAACCGCTATTCTAA back to top
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