prot_H-paniculata_contig23545.6359.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23545.6359.1
Unique Nameprot_H-paniculata_contig23545.6359.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length36
Homology
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 5.060e-11
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +GISFNDHYARGVLCVGIPYPN G P + AK  +ND
Sbjct:  434 EGISFNDHYARGVLCVGIPYPNLGDPKIVAKKCYND 469          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A2C6LBW8_9APIC (Helicase (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6LBW8_9APIC)

HSP 1 Score: 62.0 bits (149), Expect = 3.280e-10
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +G+SFND Y RGV+CVGIPYP FG P V+ KM+FND
Sbjct:  941 EGLSFNDDYCRGVICVGIPYPAFGDPKVEQKMKFND 976          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: F0VI35_NEOCL (Helicase, putative n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VI35_NEOCL)

HSP 1 Score: 60.1 bits (144), Expect = 1.560e-9
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +G+SFND Y RGV+C+GIPYP F  P +++KMRFND
Sbjct: 1876 EGLSFNDDYCRGVICIGIPYPAFRDPKIESKMRFND 1911          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A2A9MPK5_9APIC (Helicase ATP-binding domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MPK5_9APIC)

HSP 1 Score: 58.9 bits (141), Expect = 4.000e-9
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +G+SFND Y RGV+CVGIPYP F  P +++KM+FND
Sbjct: 1881 EGLSFNDAYCRGVICVGIPYPAFRDPKIESKMKFND 1916          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-8
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    5 FNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            FNDHYARGVLCVGIPYPN G P + AK  +ND
Sbjct: 1131 FNDHYARGVLCVGIPYPNLGDPKIVAKKCYND 1162          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: B6KJM8_TOXGV (ATP-dependent DNA helicase n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=B6KJM8_TOXGV)

HSP 1 Score: 57.0 bits (136), Expect = 1.910e-8
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +G+SFND Y RGVLC+GIPYP    P +++KM+FND
Sbjct: 1697 EGLSFNDAYCRGVLCIGIPYPALRDPKIESKMKFND 1732          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A7S1YN99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YN99_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 8.870e-8
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +GISFND +ARGV+CVGIPYPN     +KAK  +ND
Sbjct:  135 EGISFNDDFARGVVCVGIPYPNSFDKAIKAKKNYND 170          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A7S4EN76_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EN76_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.250e-7
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +GISFND YAR VLC+G+PYPN+    VKAK  +ND
Sbjct: 1019 EGISFNDAYARAVLCIGMPYPNYKDRGVKAKQSYND 1054          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A151ZGG8_9MYCE (DNA helicase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZGG8_9MYCE)

HSP 1 Score: 51.2 bits (121), Expect = 2.100e-6
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +GI F+D YARGV+ VGIPYPN G   VK K  +ND
Sbjct:  857 EGIDFSDEYARGVIVVGIPYPNLGDIKVKLKKAYND 892          
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Match: A0A7S0C0Q2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0Q2_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.900e-6
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    1 QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND 36
            +GISFND  ARGV+CVG+PYPN     V AK  +ND
Sbjct:  108 EGISFNDDNARGVICVGLPYPNAKDRAVSAKKAYND 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23545.6359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LEJ0_ECTSI5.060e-1175.00Helicase ATP-binding domain-containing protein n=1... [more]
A0A2C6LBW8_9APIC3.280e-1069.44Helicase (Fragment) n=1 Tax=Cystoisospora suis Tax... [more]
F0VI35_NEOCL1.560e-963.89Helicase, putative n=1 Tax=Neospora caninum (strai... [more]
A0A2A9MPK5_9APIC4.000e-963.89Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5JZN2_9PHAE1.020e-875.00Helicase ATP-binding domain-containing protein n=1... [more]
B6KJM8_TOXGV1.910e-861.11ATP-dependent DNA helicase n=15 Tax=Toxoplasma gon... [more]
A0A7S1YN99_9STRA8.870e-863.89Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S4EN76_9STRA1.250e-763.89Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A151ZGG8_9MYCE2.100e-661.11DNA helicase n=1 Tax=Tieghemostelium lacteum TaxID... [more]
A0A7S0C0Q2_9STRA2.900e-661.11Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..36
NoneNo IPR availableGENE3D3.40.50.300coord: 1..36
e-value: 1.0E-7
score: 33.6
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 2..36
e-value: 3.0E-8
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23545contigH-paniculata_contig23545:3240..3347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23545.6359.1mRNA_H-paniculata_contig23545.6359.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23545 3240..3347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23545.6359.1 ID=prot_H-paniculata_contig23545.6359.1|Name=mRNA_H-paniculata_contig23545.6359.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=36bp
QGISFNDHYARGVLCVGIPYPNFGAPLVKAKMRFND
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C