prot_H-paniculata_contig23545.6358.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23545.6358.1
Unique Nameprot_H-paniculata_contig23545.6358.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.320e-19
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0
Query:   32 LSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRI-AGKTHN---LAKWMRNYVSEFDFEAEMQQTIRQLFEVAPAYVQGRKDEAARMRAASAEERRR 129
            LSGS WY Q+A+RA NQALGRCIRH++DYGV+CL+D RI AG+  +   LAKWMR+   ++     +  TI Q F  AP +V+  K+ A  +R  ++  RRR
Sbjct: 1354 LSGSNWYAQEAYRAQNQALGRCIRHVYDYGVICLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVDTIDQFFASAPGFVREEKERAVVLRQQASVRRRR 1455          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 4.370e-19
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 0
Query:   32 LSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRI-AGKTHN---LAKWMRNYVSEFDFEAEMQQTIRQLFEVAPAYVQGRKDEAARMRAASAEERRR 129
            LSGS WY Q+A+RA NQALGRCIRH++DYGVVCL+D RI AG+  +   LAKWMR+   ++     +  T+ Q F  AP +V+  K+ AA +R  ++  RRR
Sbjct:  657 LSGSNWYAQEAYRAQNQALGRCIRHVYDYGVVCLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVGTMDQFFASAPGFVREEKERAAVLRHQASVRRRR 758          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: H3G7G4_PHYRM (HELICc2 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7G4_PHYRM)

HSP 1 Score: 81.6 bits (200), Expect = 7.140e-16
Identity = 40/74 (54.05%), Postives = 48/74 (64.86%), Query Frame = 0
Query:   32 LSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGKTH--NLAKWMRNYVSEFDFEAEMQQTIRQLFE 103
            ++GS WY  QAFRALNQALGRCIRH  DYG V L+DSR  G  H  +L+KWMR YV EF    +      + F+
Sbjct:  212 MNGSWWYKLQAFRALNQALGRCIRHRRDYGAVILIDSRHRGNMHGNSLSKWMRPYVQEFRLSEDSNPLFAEFFQ 285          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A7S0T070_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T070_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 1.490e-15
Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   32 LSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIA---GKTHN---LAKWMRNYVSEFDFEAEMQQTIRQLFE 103
            LSG EWY  QAFRA NQALGRCIRH HDY  + LVD+R        HN   ++KWMRN+V  F    E + T+++ FE
Sbjct:  292 LSGGEWYQHQAFRAYNQALGRCIRHQHDYACIFLVDARFCMHNEAAHNRSMVSKWMRNFVQYFTHPQESRGTVKEFFE 369          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A6G0XE08_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE08_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.740e-15
Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   34 GSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGK--THNLAKWMRNYVSEFDFEAEMQQTIRQLF 102
            G  WY+ QAFRALNQALGRCIRH  DYG + LVDSR  G   TH L+KW R +  EF+   E  +++R  F
Sbjct:  782 GRVWYEHQAFRALNQALGRCIRHRLDYGAILLVDSRYQGDRYTHQLSKWTRGHCQEFEKTEEALESVRDFF 852          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A6G0SKS7_9STRA (Fanconi anemia group J n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SKS7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.180e-14
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   27 VKCRALSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGKTH--NLAKWMRNYVSEF 88
            V  + ++GS WY  QAFRALNQALGRCIRH  DYG V L+DSR  G +H  +L+KWMR +V EF
Sbjct:  531 VNRKLVNGSWWYKLQAFRALNQALGRCIRHRRDYGAVILIDSRHRGNSHGNSLSKWMRPHVQEF 594          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A8K1C7G1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G1_PYTOL)

HSP 1 Score: 79.7 bits (195), Expect = 1.210e-14
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   23 ETTGVKCRALSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGKTH--NLAKWMRNYVSEFDFEAE 93
            E + V  + +SGS WY  QAFRALNQALGRCIRH  DYG + L+DSR   + H  +L+KW+R +V EF+   E
Sbjct:  803 EKSAVDRKLVSGSVWYQLQAFRALNQALGRCIRHRQDYGAILLIDSRYRFQAHTKSLSKWIRPFVREFEHAEE 875          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A6A3FXS3_9STRA (Fanconi anemia group J n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FXS3_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.220e-14
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   27 VKCRALSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGKTH--NLAKWMRNYVSEF 88
            V  + ++GS WY  QAFRALNQALGRCIRH  DYG V L+DSR  G +H  +L+KWMR +V EF
Sbjct:  863 VNRKLVNGSWWYKLQAFRALNQALGRCIRHRRDYGAVILIDSRHRGNSHGNSLSKWMRPHVQEF 926          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A662XHA0_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHA0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.630e-14
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   32 LSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGKTH--NLAKWMRNYVSEFDFEAEMQQTIRQLFE 103
            ++GS WY  QAFRALNQALGRCIRH  DYG V L+DSR     H  +L+KWMR +V EF++  +      + F+
Sbjct:  761 VNGSLWYKLQAFRALNQALGRCIRHRRDYGAVVLLDSRHRSNRHAKSLSKWMRPFVQEFEYSEQCNALFAEFFQ 834          
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Match: A0A662XIN0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIN0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.670e-14
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   32 LSGSEWYDQQAFRALNQALGRCIRHIHDYGVVCLVDSRIAGKTH--NLAKWMRNYVSEFDFEAEMQQTIRQLFE 103
            ++GS WY  QAFRALNQALGRCIRH  DYG V L+DSR     H  +L+KWMR +V EF++  +      + F+
Sbjct: 1025 VNGSLWYKLQAFRALNQALGRCIRHRRDYGAVVLLDSRHRSNRHAKSLSKWMRPFVQEFEYSEQCNALFAEFFQ 1098          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23545.6358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZN2_9PHAE3.320e-1949.02Helicase ATP-binding domain-containing protein n=1... [more]
D8LEJ0_ECTSI4.370e-1950.00Helicase ATP-binding domain-containing protein n=1... [more]
H3G7G4_PHYRM7.140e-1654.05HELICc2 domain-containing protein n=1 Tax=Phytopht... [more]
A0A7S0T070_9CHLO1.490e-1552.56Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A6G0XE08_9STRA4.740e-1554.93Helicase ATP-binding domain-containing protein n=1... [more]
A0A6G0SKS7_9STRA1.180e-1460.94Fanconi anemia group J n=2 Tax=Phytophthora fragar... [more]
A0A8K1C7G1_PYTOL1.210e-1453.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3FXS3_9STRA1.220e-1460.94Fanconi anemia group J n=3 Tax=Phytophthora fragar... [more]
A0A662XHA0_9STRA1.630e-1451.35Helicase ATP-binding domain-containing protein n=1... [more]
A0A662XIN0_9STRA1.670e-1451.35Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 23..88
e-value: 5.9E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 31..129
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 31..129
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 32..83
e-value: 3.1E-17
score: 63.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23545contigH-paniculata_contig23545:998..3077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23545.6358.1mRNA_H-paniculata_contig23545.6358.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23545 998..3077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23545.6358.1 ID=prot_H-paniculata_contig23545.6358.1|Name=mRNA_H-paniculata_contig23545.6358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
APGTGAALAAVAAAAGARWRGGETTGVKCRALSGSEWYDQQAFRALNQAL
GRCIRHIHDYGVVCLVDSRIAGKTHNLAKWMRNYVSEFDFEAEMQQTIRQ
LFEVAPAYVQGRKDEAARMRAASAEERRRRQNQGVTITVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C