mRNA_H-paniculata_contig23541.6357.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: D7FQG6_ECTSI (Tellurite resistance methyltransferase, TehB, core n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG6_ECTSI) HSP 1 Score: 265 bits (676), Expect = 8.450e-84 Identity = 144/251 (57.37%), Postives = 156/251 (62.15%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKG------PFTSSGG--------------------------------------------------------RKCEWMCVDLRKTGSLHGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDEFEILVDEAGELPTRGSVVPAQFF 567
RAN FLEFC++ ++LPS D S F G + LDLGCGSGRDTVYMAQR+ PGTRV+GVDNHSYALERG TSSG R CEW DLRK GSL G+RAS +HGHRFKCE+LLP+LRD VLLPGGYFIWSTFLDTG+ENLVPPWRPSRMMRPGELADIFSGD FEILVDE GELPTRGS VPA FF
Sbjct: 231 RANDFLEFCMDRFVLPSGHD--ASPFPGKG---LVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVAGGXXXXXXXEQGATRSQQETQTGCLGGVTSGAVGRSDTDGSEGATKGNPPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSGDGFEILVDEQGELPTRGSTVPANFF 476
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: A0A6H5L7P6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P6_9PHAE) HSP 1 Score: 264 bits (674), Expect = 1.600e-83 Identity = 142/251 (56.57%), Postives = 156/251 (62.15%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGK------------------------------------------GPFTSSGGRK--------------------CEWMCVDLRKTGSLHGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDEFEILVDEAGELPTRGSVVPAQFF 567
RAN FLEFC++ ++LPSA D F G + LDLGCGSGRDTVYMAQR+ PGTRV+GVDNHSYALERG G + +GGR CEW DLRK GSL +RAS +HGHRFKCE+LLP+LRD VLLPGGYFIWSTFLDTG+ENLVPPWRPSRMMRPGELADIFSGD FEILVDE GELPTRGS VPA FF
Sbjct: 230 RANDFLEFCMDRFVLPSAHD--AGPFPGKG---LVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGKVVGGSGNGGGSEEGATRSQRETQTGCLGGVRSRAGGRSDTDGREGTTQGQPPEVRQRACEWSLTDLRKEGSLDAMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSGDGFEILVDEQGELPTRGSTVPANFF 475
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: A0A835YXG6_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG6_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.180e-43 Identity = 93/198 (46.97%), Postives = 120/198 (60.61%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGD--SPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGR--KCEWMCVDLRKT--GSLHGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTE-NLVPPWRPSRMMRPGELADIFSGDE--FEILVDEAGELPTRGSVVPAQFF 567
R N FL+F L Y+LP + GD + + LDLGCG+GRD V++AQ++ PG RV+GVDNH AL+R S R +C W+C DLRK SL + A IHGHRF + L+ RD + + GG+F+W TF+ G E NL PP +PSRM+ GEL IFS +++L DEAGEL TRG VPA FF
Sbjct: 265 RPNDFLDFALHKYVLPDIVH---------GDRRTGLALDLGCGNGRDAVFLAQKLPPGWRVVGVDNHKGALQRC-AELASRWSRDGRCFWLCRDLRKNTASSLDDLPADIIHGHRFMDKPLMAAARDRLPV-GGFFVWGTFMQLGEEQNLAPPHKPSRMVAHGELHRIFSSGSATYKVLHDEAGELNTRGVPVPANFF 451
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: A0A0G4I8J9_9ALVE (Methyltransf_25 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I8J9_9ALVE) HSP 1 Score: 128 bits (321), Expect = 3.260e-32 Identity = 84/210 (40.00%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSG-GRKCEWMCVDLRKTGS---------LHGIRASA---IHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLV----PPWRPSRMMRPGELADIFSGDE----FEILVDEAGELPTRGSVVPAQFF 567
RAN FLEFCL+ + +++G G+ V LDLGCG+GRD V++A + G RV+G DNH AL R + G CEW DLRK G L R+ + IHGHRF +LLP+ RD +L G F+WSTF E L PP++ R++R GEL ++F + FEI+ DE G L + G V A FF
Sbjct: 163 RANVFLEFCLKKFA--PVFEEAG------GEGRVALDLGCGNGRDGVFLAAKT--GIRVVGSDNHDGALARARALTADLGLAGLCEWKQCDLRKNGKSVEDCQRELLREDRSESVGLIHGHRFLERRLLPVCRD-LLACRGLFVWSTFASVDGEILEERPGPPYKAGRLLREGELREVFESSKSDCCFEIIFDEMGTLLSHGVEVNAHFF 361
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: A0A7S1J5A0_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5A0_9EUGL) HSP 1 Score: 125 bits (314), Expect = 1.430e-30 Identity = 78/179 (43.58%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGRKCEWMCVDLRKTGSLHGIRA--SAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDEFEILVDEAGEL 531
R + FLE L+ L D GSE + +DLGCGSGRD VY+AQR+ +V GVDNH AL R + G + + DLRK GS+ + +HG RF LL +RD +L GG FIWSTF++ G ENL PP++PSR + PGEL F + IL DE GEL
Sbjct: 296 RPSEFLEEVLDICLENM---DLGSEAAYT----TAVDLGCGSGRDLVYLAQRLPSHWKVYGVDNHGNALIRSEA-LAQRAGVQVHTLNCDLRKPGSMQEFYGCIALVHGARFLDRGLLLEVRDHLLADGGIFIWSTFME-GEENLAPPFKPSRRLLPGELRQTFQSAGYTILWDEEGEL 465
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: A0A5J4Z1S4_PORPP (Rhodanese domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S4_PORPP) HSP 1 Score: 120 bits (300), Expect = 3.130e-29 Identity = 78/198 (39.39%), Postives = 103/198 (52.02%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGRKCEWMCVDLRKTGSLHGIR---ASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTG--TENLVPPWRPSRMMRPGELADIFSGD----EFEILVDEAGELPTRGSVVPAQFF 567
R N FLE LP + +E ++PV LDLGCGSGRD V++ + RV+G DNHSYALER K E VDL T L R A +HG RF LL +RD V+ GG FIWSTF+ + N+ PP++ R++ PGEL ++F ++E++ + G TRG VPA FF
Sbjct: 156 RPNEFLEQLFSSGPLPLSAY-LRAEQQKLTEAPVALDLGCGSGRDLVFLKMHLPGRWRVMGFDNHSYALERAKA-LAQRASVDVEVCTVDL--TDELQAARLPKAHLVHGCRFLHRPLLRHVRDHVIHVGGIFIWSTFVQSAESARNMAPPYKEKRVLAPGELREMFLVPSLHVQYELIEERDGVFLTRGVPVPATFF 349
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: R1EYM2_EMIHU (Rhodanese domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYM2_EMIHU) HSP 1 Score: 104 bits (260), Expect = 1.470e-23 Identity = 73/190 (38.42%), Postives = 91/190 (47.89%), Query Frame = 1
Query: 1 RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGRKCEWMCVDLRKTG--SLHGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDE-FEILVDEAGELPTRGSVVPAQ 561
R NAFL L LP A +D+GCGSGRD V++AQ + IGVDNH ALER + G + ++RK L S +HG RF LL L EV+ PGG +WSTFLD PP+RPSR ++ GE+ +F FE+L E G L TRG AQ
Sbjct: 158 RPNAFLASALRQVDLPEA--------------GAAIDVGCGSGRDAVFLAQTLGDTWETIGVDNHKGALERAQR-LADGCGVSAAFALANVRKQSLSDLTERPISIVHGCRFLDRPLLRAL-PEVVAPGGLVVWSTFLDGDGPPQAPPFRPSRRLQRGEMEHLFGESRGFEVLRAEEGTLLTRGVWESAQ 331
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: A0A7D4SI22_9GAMM (Methyltransferase domain-containing protein n=2 Tax=Thiomicrorhabdus TaxID=2039723 RepID=A0A7D4SI22_9GAMM) HSP 1 Score: 95.5 bits (236), Expect = 2.110e-20 Identity = 54/149 (36.24%), Postives = 86/149 (57.72%), Query Frame = 1
Query: 97 PVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGRKCEWMCVDLRKTGSL----HGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDEFEILVDEAGEL 531
P+ LD+GCG GRD V++A++ T+V+ +D L+R K + G + ++ C DL++ + G I G R+ +LLP L+++ L PGGYF+W TF+D G E + P P+ +++ GEL +FSG FE++VD L
Sbjct: 131 PLALDIGCGGGRDAVFLAKQR---TQVLAIDKERRVLKRAK-ELAHASGAQLQFKCCDLKQESCIPEEVKGRPFDIILGVRYLNRELLPQLKNQ-LAPGGYFLWQTFVDIG-EPIESPKNPNFLLKQGELQQVFSG--FEMIVDRIQRL 271
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: UPI001AAD7E79 (methyltransferase domain-containing protein n=1 Tax=Thiomicrorhabdus sp. 6S2-11 TaxID=2818442 RepID=UPI001AAD7E79) HSP 1 Score: 89.7 bits (221), Expect = 3.270e-18 Identity = 54/152 (35.53%), Postives = 82/152 (53.95%), Query Frame = 1
Query: 88 GDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGRKCEWMCVDLRKTG----SLHGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDEFEILVDEAGEL 531
G P+ LD+GCG GRD V++A++ G +V+ +D + L+R K S G + ++ DL + G I G R+ +LLP L+++ L GGY +W TF+D G E L P PS +++P EL +FSG FE+ VD +
Sbjct: 132 GKRPLVLDIGCGGGRDAVFLAKQ---GCQVVAIDKEARVLKRAK-QLAQSLGAQVKFSGCDLNTENCVPADIKGRPFDLIIGVRYLNRELLPQLKEQ-LAEGGYILWQTFIDIG-EELSSPKNPSFLLQPDELKQVFSG--FEVFVDRIARI 275
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Match: UPI000417C8D2 (methyltransferase domain-containing protein n=1 Tax=Thiomicrorhabdus chilensis TaxID=63656 RepID=UPI000417C8D2) HSP 1 Score: 86.3 bits (212), Expect = 5.380e-17 Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 43 LPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAQRMRPGTRVIGVDNHSYALERGKGPFTSSGGRKCEWMCVDLRKTGSLHGIRASAIHGHRFKCEQLLPILRDEVLLPGGYFIWSTFLDTGTENLVPPWRPSRMMRPGELADIFSGDEFEILVDEAGELP 534
+ S + DS S +A +DLGCG GRD V++A++ G +V +D S ++R K S G +W C DL+K G L + RF L + D + PGG+ ++ TF++ G E P P+ ++R GELA +F+ +F++++D LP
Sbjct: 114 IESVVTDSKSHAGTA------IDLGCGGGRDAVFLAKQ---GWKVTAIDQESRVIKRAK-QLASRAGASVKWKCCDLKKAGCLPETEFDLVLVMRFLNRNLYSEI-DARVKPGGWLVFQTFVE-GVEVFGSPKNPNYILRKGELAQVFA--DFKVIIDRIDILP 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23541.6357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23541.6357.1 >prot_H-paniculata_contig23541.6357.1 ID=prot_H-paniculata_contig23541.6357.1|Name=mRNA_H-paniculata_contig23541.6357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp RANAFLEFCLEFYLLPSAIDDSGSEFSSAGDSPVCLDLGCGSGRDTVYMAback to top mRNA from alignment at H-paniculata_contig23541:1143..2709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23541.6357.1 ID=mRNA_H-paniculata_contig23541.6357.1|Name=mRNA_H-paniculata_contig23541.6357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1567bp|location=Sequence derived from alignment at H-paniculata_contig23541:1143..2709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23541:1143..2709- >mRNA_H-paniculata_contig23541.6357.1 ID=mRNA_H-paniculata_contig23541.6357.1|Name=mRNA_H-paniculata_contig23541.6357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at H-paniculata_contig23541:1143..2709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |