prot_H-paniculata_contig235.6345.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig235.6345.1
Unique Nameprot_H-paniculata_contig235.6345.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length673
Homology
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BLAST of mRNA_H-paniculata_contig235.6345.1 vs. uniprot
Match: D8LCG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG4_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 2.660e-78
Identity = 243/644 (37.73%), Postives = 315/644 (48.91%), Query Frame = 0 
Query:    3 WEDLRSELLRSAESELQHDPFRVGEGKWQYIPTLRSWGELVHLGFDTGSGLENKDEVLDALEVARKEAQEERERVAEVRRQRGLARFKRSEDERRLREEAERLRWMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAEVLRVRDVKAVAAARLAAELQRERDSEILTMSVEDELSRQLTVTRRAAELLLQQKGAFLRELYTPFVPM----------------------------------DATVVGVTTG--------------------EGKEQ-------ERHALRGWKDTDVPLIWGGPTGLFSG-------------RSKATPGSRFVPYARAILDELETQPTSIGRLSREFLNLLGLPYACVRDMYKQGSWTVKDGDAMVDDIQLGRVFTMFEKDEVRNNLVPVIP-LERLGTRRLSRGTTR----------------------PPERQRNNHGRPQTTIE-PGQSSH-HRRHQGRYSSSLSQP-----------------------RDKNNVLLFPISEGHERKLSMPSASAR-------------------RGGTCTAERLIGG------CGGRVDWPGRGWGPRQVVRTGAEAIVGLPLSGDERGDEA 499
            WED RSEL+R+AE+EL  DPFRVGEG+WQY  TL SW EL +LGF+ G+GLENKDE+ DALE+ARKEAQEERERVAEVRRQR +AR  R E          RLRWM                  XXXXXXXXXXXXXXXXXXX                    +A+  R+  + A A A +  E++R  ++E+  M++ED  SRQ+     AAE +L+ + A+L +LYT FVP+                                  +  VVGV                       +G++Q       ++     W+  D P IW GP    +                K TPG+RFVP  +A+LD LE Q  ++GRLSRE+L LLGLPY  +RDM+++ SWTVK+G+AMVD IQLGRVFTMFEK+EVR+NLVP++P ++RLG  R                             P +  R    RPQTT+  PG+++  +R H+  YSS+   P                       +  +N  L    +  + +   P+A +R                           + IGG        G   WPG+GW  RQVV  GAEAI GLPLSGDER D A
Sbjct: 2615 WEDFRSELMRTAEAELNSDPFRVGEGEWQYSATLLSWRELKYLGFEDGTGLENKDEIHDALEIARKEAQEERERVAEVRRQREIARQTRLEXXXXXXXXXXRLRWMRETKERRRLVQQHMANLKXXXXXXXXXXXXXXXXXXXLAVMREEKRFLQEQQAKEDAKAKECRLLKMAAAAVASMEEEVRRRLEAEMEAMALEDNRSRQVEDETLAAEAVLRDREAYLSQLYTSFVPLWGKHWEDGSEAPLQGLEAQGDRLEAVLGGGPRLAEEEVVGVEGDVDDCHLNAKFDGDNVHLDGVDGRDQANDDGGTKQRPTMWWRGADAPHIWTGPRKPGAAPAAAGCRRPATTMNGKLTPGARFVPAEQALLDGLEPQAMTVGRLSREYLTLLGLPYESIRDMFQKDSWTVKNGNAMVDGIQLGRVFTMFEKEEVRDNLVPIVPTIDRLGKSRQQSXXXXXXXXXXXXXXXXXXXXXXXXXXPLDGPR---PRPQTTVPIPGETARRYRSHRSGYSSASPSPHAPRRGALLSLGQEDSEEVGRAWKRNSNYYLHHNHDDQKNQAGWPAAESRPLTVRSSGNXXXXXXXXXXXXXXXXXXKSIGGRRTAAAYDGDEFWPGQGW-RRQVVHAGAEAIAGLPLSGDERDDYA 3254
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig235.6345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCG4_ECTSI2.660e-7837.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..83
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableCOILSCoilCoilcoord: 148..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig235contigH-paniculata_contig235:28226..33973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig235.6345.1mRNA_H-paniculata_contig235.6345.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig235 28208..33973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig235.6345.1 ID=prot_H-paniculata_contig235.6345.1|Name=mRNA_H-paniculata_contig235.6345.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=673bp
MQWEDLRSELLRSAESELQHDPFRVGEGKWQYIPTLRSWGELVHLGFDTG
SGLENKDEVLDALEVARKEAQEERERVAEVRRQRGLARFKRSEDERRLRE
EAERLRWMLETKERRNLVQQHMSNLKRQRALEAERLEMEREEKATLSVIR
EENRLLEERRAKEAIEAEVLRVRDVKAVAAARLAAELQRERDSEILTMSV
EDELSRQLTVTRRAAELLLQQKGAFLRELYTPFVPMDATVVGVTTGEGKE
QERHALRGWKDTDVPLIWGGPTGLFSGRSKATPGSRFVPYARAILDELET
QPTSIGRLSREFLNLLGLPYACVRDMYKQGSWTVKDGDAMVDDIQLGRVF
TMFEKDEVRNNLVPVIPLERLGTRRLSRGTTRPPERQRNNHGRPQTTIEP
GQSSHHRRHQGRYSSSLSQPRDKNNVLLFPISEGHERKLSMPSASARRGG
TCTAERLIGGCGGRVDWPGRGWGPRQVVRTGAEAIVGLPLSGDERGDEAV
ISPVTAAALAAHARVPPVMYHGNDLGLTGAMNAKPDDTTTSSISLSLDSE
QQQKLKTSQIAAQSSLKIESDVHQQQSRSFDVPASPNEQIFTPSPKPSDK
ASATTVEAQPKRRVLQAATVDKMQVVRRQDGNLQWGGFGPGHVPRYFRGK
FGVAGKKKNIVGRKTQVIDSGE*
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