mRNA_H-paniculata_contig235.6344.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig235.6344.1 vs. uniprot
Match: D8LCG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG4_ECTSI) HSP 1 Score: 1275 bits (3300), Expect = 0.000e+0 Identity = 1049/2628 (39.92%), Postives = 1326/2628 (50.46%), Query Frame = 1
Query: 1 YVAGIFAEAGIVLFDV-ASGLVEKHVLDTSTEGNGGGKILAAAWNGDTCSLALATEAGGVKIYSLLPA---------------------HHTHNIITATSER-------SLLGVVVRPP--PATLVLQHEIIIKGLSPVEQHTASAGNDKELSFDGNGNRKFSISRVTSLAT----------------NEMPPGEER----GGAAILLGMVEGHHLCVWDLTTGCTLLTALALAPDGCKVEKMAWHAPAGLVALVQSLEEGARRIDVYQLDIVGKSVNQVLSYTSDVLIAGVSFSAAPNPGAS--AVYASGAS--GSFNNMEPRLPTY------VYLHVVDRLRTLRTWLLHLGGAIAVSAYSLPTPAPRVP----IPMDVVARV-------------SASASGPE--SHDTISETPRDDKGDCNAHDGNVTTAKVRGSGEKHVRSSGERVPQQRHRRHQPEQNVV----LHDEE----------AVDPRTLATGAVVATVIPGPLPQQD---GPCFLVMAGVALSIVSFLKTSDVCTVGQHGDQGTLLEIEQALDARDRDG-LRDGA------PRVFGMQAIVSEPGGLQAVAVLWAERPSFQVLDVGGAGEAATVQNVSLARLHRENQVTAVPRRDRVCFLTSWAHSTVLKTLLCGWNDGVVDIVSPRNPARRVRLLRPGS-------ICIPVTALCAIPISILTDL-GNQILSY--LGGG----DSETSGGIAKLAFAGSADGTIALWSTAGASR-PLHVLLAHSDAVVSVRTTMDAPSDAY----GCRQATATRYVAEHTRCNRGTGVFGRAEHCAEESRQFFVVTAGANREVKVWGIRAGSSIDADAVRLTLGGYTVVGTGRAND------RLTVVELLSERFIVCGFASGAVEVWAIPFDSRGAASLATVRAAEQAFPKVHGATVTSITVSLGLKDPG-SGGLDGSV--GRTVFTTSTDCTAVRWVSLAPGDSLKPLCRYCLSSEPAAMVLLPPS---NVTPSNRIRTAGVPQ------------------GAPGTTTAT----TFRVVAALEGTIIVLELATTRQLLRGNSVMMNTTQDPRS---AIANAIPGTPLVPQIAFRFPSEDGSGEM------GGPGIRWAVGGVLGRKAGSYEVLGGIQGVLKEWEATGNRRIIASMSARTAWEVDNAERVNGTNERRGEG-HGGSIPTGLRQQQETNESSAKLPR--WTQKRSEKRDNGKKVKEAINALA--RPSNTLKTTVTTLSIHTDEDIDYGVGGDSGTNSKEGYRRVRGGKLIKLDPEFVANSAATALYS-FFNYMENNAQSSSAPSFPVFISWRPSSSTAQSESVQNTMAYSLELTMPTYSL---GSTP----ENLSSV------------------GPRSVGDR-------STTIDISKDLCVDTSRAESPGTPLEWGNIHCGGSTVLGWPPSLPPPTHTDTMRKQNPMLLGMLQSVGSISPSTDISQGETMKSTGEMSPSVQELLNEEHEDEDTLLV---------------GSRKSATNACEKPPGAAKVTVANAAIARAKREVDGSRSRS--PTVLSERRPPILPAQVPRPPFNFDSAQAPLAGMSGVGVAVPRGFSDTR-----------------MHASKRSFTSVAPMNSVTRQRI---GGRM-----------VQTSSTLEVDRRRREIRKI-----EIFPTGLVMSKHFREASTGREILMLEIEKAAFRLFSSPSNVNGSASEGHSLDFAGARAEIAANAELAAXXXXXXXXXXXXEMALLSPRTQLLRQVFTSLSSGRELLTQEALVKWKYVSGAIDRGLVSEYQVKSLYRKAHGGRQRGRMVWRDIVSFYNDMEDALDKACTPPLIEEFVVDSEDWNSVSASLHLTKRGDVYVVAVETVDAXXXXXXXXXXXXXAVRDGVG----GG----IAAWTTATATNPHVPIRVTLTGLSPERSYVLYAYAENG-GGRVGGGDGNDYGVELQGGFIKMDTTRLFSVEPAPSGMSGALVKATRLVATTTREPDEELDVPWEDLSEEEKMAEALAALSDPGVARAARQAGLDVPSSEDLA--RREKEMVSKNKWRSFCRWWADRGASTA---------ERSAFLLRECVFAAQQSEVVEEAARMGVQLLDDDWTVAVDGDADGEGTRTTS---SGRHQRWTAFRSWYRGGRVFDRAHEALIAAAIMQPLPSPASEGRPLTPCLVPTDCTPPVAPSM---DNTCSSDLTVPPES-------ELAPGVRPLGEAEGARM-IEGGA----KGIEPSKVTMTEVPTRAGLPSRQVATAEPIVHVV-------TLPVSLVGEEAHATSDKARDIGTLDTTSLSDQLGPLLEEDLRSVEE-SVDGSSVDGLVGWNNDRIEEASIGEMAARGEGEKVPRLVATSGSQAAKQLRMEARRKFLAARTVDSKAAAKKVEKLLDLKREDVKAKRVVAAASGVVVRSRKAAKAARGLRRRSHVERELALKRANEILERSGKAEDIRQRRGSLGTLRPEDVAAIGVFDDFNLSEFDPEKPDPDLFRRRSSAL-GESVMSDSACATAIWKPYSFDERTLELQLACVHPKVCLLAALVGVGVPDPEDVSTLLSHKKTR 6972
YV G+F G+VLFD G+V +HVL KIL AAWN DTCSLA+AT AGGVKIY +LP ++ ER + + PP PAT VL+HEI+I +S G RK +V+SLAT NE R GA IL+G+ EG HLCVWDL TG TLLTAL++AP GC VEK+ WH P LVAL+ G R+DV+Q+D+ + +LSY SDVL+AG SFSA P+ A+ V SG + NN+ + YLHVVDRLRTLRTWLLH GG+ AV+AY+LP APRVP +P + SAS GP + S+T + G A +++ P+ RH+ E V + EE AVDPR L +GA++A VIP D GP LV AGVALS VSFL G+ DQ +L +A RDG +++G PRV GM+++V G LQA+A++WAERPSFQVLDV G G A V+ VSLAR HRE+QV + PR DR CF+TSW HST L LLCGWNDG VD+++PR + RL R C+ TA+ IP+S+L GNQ +S L GG D GG +A GSADGT+ALWS ASR P HV+LAH+D VVS+RT MDAP D G ++A A G+G + ES FFVVTAGANREVKVWGI +S D LTL GYTVVG+G RLT +ELLSE + CGF SGAVEVW IPF SR LA+ R A QAFP H A VTSI V+LG+ SGG V GR + TTS D T VRWVS+APGD+++PL RYCLS EPAA VLLPP P R AG P G+ ++T TFRVVAAL+G + VLE AT L+ + + R A+ANA PG PL+P++ R + GS G RW VGG GR+AG Y V GGIQG L WEA+G RR++ + ++R AW R +G + +G H S PT + + + K+ R +R R V+ ++N L P + +T++ + DI + YR+V GGK +K+DPEF A +AA A + F + + P V S + YSLEL +P+ S G+ P E+ S+V G S G R S T + S L ++ S +E + G + G + + + PP D P++ G G + GE + S VQ EH G K G VA + AR R+ +R R+ P V+ R+P + R FNFDSAQAP +GMSGVGVAVP+G++D R + A+KRSFT + + ++R GG + QT + R+ E E++PTGLV++KHFRE+STGREILMLE++K LR+VF +L++GR++LTQEALVKW YV+ +I+RGLVS+YQV+SL+R+AHGGR RG+M WRDI++FY ME ALDKAC PPL+EEFV+DS +W+ VSASL+LTKRG+VYVVAVE XXXXXXXXXXXXX G GG +A +AT NP VP R+TL+GLSPER Y+LYAY ENG GGR+G G D GG T+ +FS+EPAPSGMS ALV ATRL A T REPDEELDVPW+DLSE E+MAEALAAL DP VARAAR+A LD P+++DLA R VS+NKWRSFCRWWA S ERSAFLLRECVFAAQQ E++EEAA MGVQ+L+ DW V+ A G + S R +RWTAFRSWYRGGRVFDRA E LI AA+++ PSP S+GRPLTP L P D P AP+ + ++ V +S ++A +GAR +E A KG P VT +AG+ + TL V+L+ + + + + G E LR ++ +D + + G+ GW+ A +V +LLD+KREDVKAKRV AASGVV R R S VE+ LALK+A+E+LE SGKAEDIRQRRGSLGTLRPEDVAAIGVFD F++ + +LFRRRSSA GE +S S A W+P S DE LELQLACV P+VC LAA +GVPDPED S+ L +KK R
Sbjct: 80 YVVGVFEVDGVVLFDARGGGVVHRHVL-LHLGKKRDKKILTAAWNADTCSLAIATAAGGVKIYGILPTPPPVLSSGXXXXXXXXXXXTTRGAIVVVPGEKERQQHPDSATAASATISPPTRPATAVLRHEIVIN----------------TVSMTVGGGRKRVNRQVSSLATSSDGVSWEDFGGEGRDNECGGARSRVAAAAGAGILVGVAEGQHLCVWDLATGSTLLTALSIAPRGCTVEKVLWHGPTALVALLYHDGIGVSRVDVHQVDVGRRVTIPLLSYMSDVLVAGASFSAGPSDRAANAQVPPSGTTPWDDDNNLSDPATSMDCSYASTYLHVVDRLRTLRTWLLHPGGSTAVAAYTLPAAAPRVPKEPTLPPEAERTAQRRQLRTGEGETDSASPPGPTVGPESSFSDTKGSSLSPPHGSGGGGDGAPYDTGQQRNTTH-----PELRHKGRPAETQAVNGGDIFGEEVEEXXXXXXXAVDPRKLPSGALIAAVIPSRSRCPDVAVGPGLLVAAGVALSGVSFLPED---REGRQ-DQSPILWESGEEEAGVRDGSIQEGGGNAGAPPRVLGMRSLVPRHGALQALALVWAERPSFQVLDVSGGGRAGVVEEVSLARRHREDQVESAPRVDRPCFITSWCHSTTLGVLLCGWNDGTVDVMNPRTASVSFRLRRSQQQLLPARGACVSTTAVGLIPLSLLLRYAGNQFISEAELSGGSLPHDDAGRGGGGVVALVGSADGTVALWSAGRASRRPWHVILAHTDVVVSIRTAMDAPQDPLERLGGVKEAAAAD--------GHGSG----PGNAVGEST-FFVVTAGANREVKVWGID--TSQRQDMSPLTLAGYTVVGSGGGXXXXGDVGRLTALELLSEGHMACGFESGAVEVWTIPFASRSGV-LASTREALQAFPLAHEARVTSIVVALGMGFRSHSGGXXXGVKAGRVILTTSADRTVVRWVSMAPGDNIRPLRRYCLSVEPAAAVLLPPPVDIEPAPGTAGRHAGGPSPPRKFAKVDIMVAGSAVAGSTARVSSTRKPNTFRVVAALDGVVAVLESATVEALMGESGSGGGGGRQSRHLCPAVANAFPGKPLIPRLPSRSVAYGGSSSSETTAIRGDGAYRWKVGGPRGREAGRYHVFGGIQGPLLGWEASGKRRMVLTAASRDAWLA--LPRADGGGDTHDDGTHRASSPTSDLRPESSKRERKKISRRGGVGQRIPMRRGPTPVRPSVNNLTVFPPPDPQETSINSDRADHTHDI------SDKPPPQHAYRQVSGGKTVKIDPEFAAAAAAAAAWDHLFLQQPSTGDGAVLPQSVV------GSGEVEPGGQHIAGMYSLELAVPSLSRRPSGARPRDRDEHFSAVAGSFRGGTTSGSPNGXXXGSMSSGFRYPPGSTLSNTNEDSATLALEASGSEL--REVRSGAVESGA--MFDYSSKVVPPM--DGCFSGEPVVTGGRYPSGGGGERSSSPAGEIIHSR------VQRREQAEHATXXXXXXXXXXXXXXXGRSAEDGDXXXXXKDGGKLAGPMNAVVAASVAARRARDSWDARGRTETPVVVGRRQPSYVHES--RLQFNFDSAQAPSSGMSGVGVAVPKGYADARDGGGGLSGDSPSSISLSLRAAKRSFTPSTSLTKIAKRRFIPRGGTLNEQKATPADAAAQTGAGAGPADRQEEPATAGNVTEEVYPTGLVVTKHFRESSTGREILMLEVDKR-------------------------------------------------------------LREVFETLAAGRDVLTQEALVKWDYVARSIERGLVSQYQVRSLFRQAHGGRHRGKMEWRDIIAFYEGMESALDKACAPPLVEEFVIDSVEWDRVSASLYLTKRGEVYVVAVEAGXXXXXXXXXXXXXXXXXXXXXGASRGGGCTQAVAGSASATVANPDVPARLTLSGLSPERDYLLYAYGENGVGGRLGAGFRGD---GCHGG--DPTTSGVFSMEPAPSGMSAALVAATRLEARTEREPDEELDVPWKDLSESEQMAEALAALMDPVVARAAREAALDPPTADDLAPGRCAANPVSRNKWRSFCRWWATAVGSNGXXXXXXXXTERSAFLLRECVFAAQQPEILEEAAMMGVQILEGDWNAEVEVAAASGGRANPNKNPSARKRRWTAFRSWYRGGRVFDRADETLITAAMLRRPPSPGSQGRPLTPRLTPADGPRPAAPTTFGEEEVSAAPAKVVDKSGDGNEQGKMAAAAASRESTDGARAEVEKTAAAADKGTVPGHVT-----PKAGIMRGRTTXXXXXXXXXXXXXXXSTLHVTLLKTDQSKRARTSXXXXXXXXADGPQEDGRAATEVLREQQDRGIDTARLAGIAGWD-----------------------------------------------------AREDEVGRLLDVKREDVKAKRVAEAASGVVAR-RGRXXXXXXXXXXSQVEKALALKKADELLEESGKAEDIRQRRGSLGTLRPEDVAAIGVFDRFDMEQXXXXXXXXELFRRRSSATSGEESLSGSQKEAAAWEPRSPDELNLELQLACVQPRVCTLAASARIGVPDPEDASSTLPNKKLR 2512
BLAST of mRNA_H-paniculata_contig235.6344.1 vs. uniprot
Match: A0A6H5KVT0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT0_9PHAE) HSP 1 Score: 1228 bits (3178), Expect = 0.000e+0 Identity = 1035/2589 (39.98%), Postives = 1317/2589 (50.87%), Query Frame = 1
Query: 1 YVAGIFAEAGIVLFDVASG-LVEKHVLDTSTEGNGG-----------------------------------GKILAAAWNGDTCSLALATEAGGVKIYSLLPAHHTH---------NIITATSERSLLGVV-------------------VRPP--PATLVLQHEIIIKGLSPVEQHTASAGNDKELSFDGNGNRKFSISRVTSLATN------EMPPGEER--------------GGAAILLGMVEGHHLCVWDLTTGCTLLTALALAPDGCKVEKMAWHAPAGLVALVQSLEEGARRIDVYQLDIVGKSVNQVLSYTSDVLIAGVSFSAAPNPGASAVYASGASGS----FNNMEPRLPTY------VYLHVVDRLRTLRTWLLHLGGAIAVSAYSLPTPAPRVPIPMDVVARVSASASGPESHDTISETPRDDKGDCNAHDGNVTT-AKVRGSGEKHVRSSGE---------------RVPQQRHRRHQPEQNVV--------------LHDEEAVDPRTLATGAVVATVIPGPLPQQD---GPCFLVMAGVALSIVSFLKTSDVCTVGQHGDQGTLLEIEQALDARDRDGL------RDGAP-RVFGMQAIVSEPGGLQAVAVLWAERPSFQVLDVGGAGEAATVQNVSLARLHR--ENQVTAVPRRDRVCFLTSWAHSTVLKTLLCGWNDGVVDIVSPRNPARRVRLLRPGS-------ICIPVTALCAIPISILT-DLGNQILSYLGGGDSETSGGIAK---------------LAFAGSADGTIALWSTAGASR-PLHVLLAHSDAVVSVRTTMDAPSDAY----GCRQATATRYVAEHTRCNRGTGVFGRAEHCAEESRQFFVVTAGANREVKVWGIRAGSSIDADAVRLTLGGYTVVGTGRAND------RLTVVELLSERFIVCGFASGAVEVWAIPFDSRGAASLATVRAAEQAFPKVHGATVTSITVSLGLKDPG-SGGLDGSV--GRTVFTTSTDCTAVRWVSLAPGDSLKPLCRYCLSSEPAAMVLLPPS-NVTPSNRIRTAGVPQGAP-------------------GTT-------TATTFRVVAALEGTIIVLELATTRQLL-RGNSVMMNTTQDPR--SAIANAIPGTPLVPQIAFRFPSEDGSGEM------GGPGIRWAVGGVLGRKAGSYEVLGGIQGVLKEWEATGNRRIIASMSARTAWEVDNAERVNGTNERRGEG-HGGSIPTGLRQQQETNESSAKLPRWTQKRSEKRDNGKKVKEAINALARPSNTLKTTVTTLSIHTDEDI-DYGVGGDSGTNSKE---------GYRRVRGGKLIKLDPEFVANSAATALYSFFNYMENNAQSSSAPSFPVFISWRPSSSTAQSESVQNTMAYSLELTMPTYS------------LGSTPENLSSVGPRSVGDRSTTI-----------DISKDLCVDTSRAESPGTPL-EWGNIHCGGSTVLGWPPSLPPPTHTDTMRKQNPMLLGMLQSVGSISPSTDISQGETMKSTGEMSPSVQELLNEEHEDEDTLLVGSRKSATNACE----------KPPGAAKVTVANAAIARAKREVDGSRSRS--PTVLSERRPPILPAQVPRPPFNFDSAQAPLAGMSGVGVAVPRGFSDTRMHASKRSFTSVAPMNSVTRQRI---GGRMVQTSSTLE------------VDRRRREIRK----IEIFPTGLVMSKHFREASTGREILMLEIEKAAFRLF---------------SSPSNVNG----SASEGHSLDFAGARAEIAANAELAAXXXXXXXXXXXXEMALLSPRTQLLRQVFTSLSSGRELLTQEALVKWKYVSGAIDRGLVSEYQVKSLYRKAHGGRQRGRMVWRDIVSFYNDMEDALDKACTPPLIEEFVVDSEDWNSVSASLHLTKRGDVYVVAVETVDAXXXXXXXXXXXXXAVRDGV----GGG----IAAWTTATATNPHVPIRVTLTGLSPERSYVLYAYAENG-GGRVGGGDGNDYGVELQGGFIKMDTTRLFSVEPAPSGMSGALVKATRLVATTTREPDEELDVPWEDLSEEEKMAEALAALSDPGVARAARQAGLDVPSSEDLA--RREKEMVSKNKWRSFCRWWADRGAST---------AERSAFLLRECVFAAQQSEVVEEAARMGVQLLDDDWTVAVDGDADGEGTRTTS--SGRHQRWTAFRSWYRGGRVFDRAHEALIAAAIMQPLPSPASEGRPLTPCLVPTDCTPPVAPSM---DNTCSSDLTVPPES-------ELAPGVRPLGEAEGARM-IEGGAKGIEPSKVTMTEVPTRAGLPSRQVATAEPIVHVVTLPVSLVGEEAHAT------SDKARDIGTLDTTSLSD---QLGPLLEEDLRSVEE-SVDGSSVDGLVGWN--NDRIE--EASIGEMAARGEGEK------------VPRLVATSGSQAAKQLRMEARRKFLAARTVDSKAAAKK-----VEKLLDLKREDVKAKRVVAAASGVVVRSRKAAKAARGLRRRSHVERELALKRANEILERSGKAEDIRQRRGSLGTLRPED 6687
YV G+F E G+VLFDV G V +HVL + N G KIL AAWN DTCSLA+AT GGVKIY + P + I + ++ R ++ VV PP P T VL+HEI+I + T + G K +S +V+SLAT+ E GE R GA IL+G+ EG HLCVWDL G TLLTAL++AP GC VEK+ WH P LVAL+ G R+DV+Q+D+ + +LSYTSDVLIAG SFSA P+ A+ V + NN+ YLHVVDRLRTLRTWLLH GG+ AV+AY+LP APRVP + +A + E D G ++ + +GS SG P RH+ E+ V + EEAVDPR L +GA++A VIP L D GP LV AGVALS VSFL G+ DQ +L +A R G GAP RV GM+++V G LQA+A++WAERPSFQVLDV G A V+ VSLAR HR E+QV + PR DR CF+TSW HST L LLCGWNDG VD+++PR + RL R C+ TA+ IP+S+L GNQ +S ++E SGG +A GSADGT+ALWS ASR P HV+LAH+D VVS+RT MDAP D G ++A A G+G R + FFVVTAGANREVKVWGI D LTL GYTVVG+G RLT +ELLSE + CGF SGAVEVW IPF SR LA+ R A QAFP H A VTSI V+LG+ SGG V GR + TTS D T VRWVS+APGD+++PL RYCLS EPAA VLLPP +V P+ + TAG G P G+T T TFRVVAAL+G + VLE AT L+ G S Q A+ NA PG PL+P++ R + GS G RW VGG+ GR+AG Y V GIQG L WEA+G RR+ + ++R AW + +G + +G H S PT + S+K R +K S + GK++ + R + ++ L++ D + + D ++ + YR+V GGK IK+DPEF A + + + P + S + E +SLEL +P + GS +S P G S + D ++D T E+ G+ L E G+ + + + PP D P+ G G + GE + S + + +NE K G VA + AR R+ +R R+ P V+ R+P + R FNFDSAQ P +GMSGVGVAVP+G++D R+ A+KRSFT + + ++R GG + + +T+ DR+ E++PTGLV++KHFRE+STGREILMLE++K + S P G +A EG LD E AA XXXXXXXXXXXXE+A LSPR++ LR+VF +L++GR++LTQEALVKW YV+ +I+RGLVS+YQV+SL+R+AHGGR RG+M WRD+++FY ME ALDKAC PPL+EEFV+DS +W+ VSASL+LTKRG+VYVVAVE XXXXXXXXXXXXX GGG +A +AT NP VP R+TL+GLSPER Y+LYAY EN GGR+G G D GG T+ +FS+EPAPSGMS ALV ATRL A T REPDEELDVPW+DLSE E++AEALAAL DP VARAAR+A LD P++EDLA R VS+NKWRSFCRWWA ERSAFLLRECVFAAQQ E++EEAA MGVQ+L+ DW V+ A G S R +RWTAFRSWYRGGRVFDRA E LI AA+++ PSP S+GRPLTP L P D P AP+ + ++ T +S E A L +GAR +E ++ V P + R+ P G H T + +AR T D + +D + G E LR ++ +D + + G+ GW+ D ++ E + G EG++ +P G+ AAK+LRMEARRKFLAARTV S AA K V +LLD+KREDVKAKR AASGVV S VE+ LALK+A+E+LE SGKAEDIRQRRGSLGTLRPED
Sbjct: 80 YVVGVFEEDGVVLFDVRDGGEVHRHVLLHLGKKNLGWGMGLQFRTFSRTARHSYVAERLAVSRCAPTPQRESKILTAAWNADTCSLAIATAGGGVKIYGISPTPPSELPSSIGSGSGIGSGSTARGVIVVVPGEKERQQHPDSGTAASATTSPPTRPVTAVLRHEIVINTVL-----TTTGGTRKRVSR-----------QVSSLATSSDGVSWEDFGGEGRDNDCGGVRSRVAAVAGAGILVGIAEGQHLCVWDLVAGSTLLTALSIAPRGCTVEKVLWHGPTALVALLYHDGIGVSRVDVHQVDVGRRITIPLLSYTSDVLIAGASFSAGPSDRAANVQVPPTGTTPWHDHNNLSDPATAMDCSYASTYLHVVDRLRTLRTWLLHPGGSTAVAAYTLPAAAPRVPKEPALAPETQRTAQRRQLRTRAGEGETDSASPPGPAVGPESSFSDTKGSSLSSPHGSGRGGDGAPYDTGQQRCTTQPDLRHKGRPAEKQAVNGGDDFGEEGEEGEVEQEEAVDPRKLPSGALIAAVIPSRLRCPDVAAGPGLLVAAGVALSGVSFLPED---REGRQ-DQSPILWESGEEEAGVRHGSIQEGGGNAGAPSRVLGMRSLVPRRGALQALALVWAERPSFQVLDVSRGGRAGVVEEVSLARRHRYGEDQVESAPRVDRPCFITSWCHSTTLGVLLCGWNDGTVDVMNPRTASVSFRLRRSQQQLLPARGACVSTTAVGLIPLSLLLRHAGNQFIS-----EAELSGGSLPHDDAGXXXXXXXRGVVALVGSADGTVALWSAGPASRRPWHVILAHTDVVVSIRTAMDAPQDPLERLGGVKEAAAAD--------GHGSGPGNRVGEYS-----FFVVTAGANREVKVWGIDTARRQDMSP--LTLAGYTVVGSGGGXXXXGDVGRLTALELLSEGHMACGFESGAVEVWTIPFASRSGV-LASTREALQAFPLAHEARVTSIVVALGMGFRSHSGGXXXGVKAGRVILTTSADRTMVRWVSMAPGDNIRPLRRYCLSVEPAAAVLLPPPVDVEPA--LGTAGRHAGGPSPPRKFAKVDIMVAGSAVAGSTARVSSIRTPNTFRVVAALDGVVTVLESATVEALMGEGGSGGGGGRQSQHLCPAVTNAFPGKPLIPRLPSRSVAYGGSSSSETTAARGDVAYRWRVGGLRGREAGRYHVFSGIQGPLVGWEASGTRRMALTAASRDAWL--SLPGADGGGDSHDDGAHRASSPTS-----DLRPESSKRER--KKTSRRGGAGKRI-----PMRRAPTPARCSINNLTVCPPPDPRETSINSDRAGHAHDISDKPPPQYAYRQVSGGKTIKIDPEFAAAXXXXXXAPWDHLFLQQPSTGDGAVLPQSVE---GSGEVEPEGQHIAGIHSLELVVPRAARPRDRDEDFSAVAGSLRGGTTSGSPNGGGGGSVSSGFRYPPGSSLSDTNEDGA--TLALEASGSDLREVGSGAVESGAMFAYSSKVVPPI--DGCFSGKPVATGGRYPSGGGGERSSSLAGERIHSRAQRREQAEHSMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGGKLEGPMNAVVAASVAARRARDAWDARGRTETPVVVGRRQPSSMHES--RLQFNFDSAQTPSSGMSGVGVAVPKGYADARLRAAKRSFTPSTSLRKIAKRRFIPRGGTLNEQKATVADAAAQMRAGAGPADRQEESETAGNVAAEVYPTGLVVTKHFRESSTGREILMLEVDKVGSDVLGADRRSLWAGDAGALSQPLTFGGRQGVAAGEGVGLD------ETAAAXXXXXXXXXXXXXXXXXELASLSPRSKRLREVFQTLAAGRDVLTQEALVKWDYVARSIERGLVSQYQVRSLFRQAHGGRHRGKMEWRDMIAFYEGMESALDKACAPPLVEEFVIDSVEWDRVSASLYLTKRGEVYVVAVEAGXXXXXXXXXXXXXXXXXXXXXXASRGGGCTQAVAGSASATVANPDVPARLTLSGLSPERDYLLYAYGENSVGGRLGAGFRGD---GCHGGDAT--TSGVFSMEPAPSGMSAALVAATRLEARTEREPDEELDVPWKDLSESEQIAEALAALMDPVVARAAREAALDPPTAEDLAPGRCAANPVSRNKWRSFCRWWATAXXXXXXXXXXXXXTERSAFLLRECVFAAQQPEILEEAAMMGVQILEGDWNAEVEVAASGGSINPNKNPSARQRRWTAFRSWYRGGRVFDRADETLITAAMLRRPPSPGSQGRPLTPRLTPADGPRPAAPTTFGEEEVSATPTTAVDKSGDGNEQVETAAAAASLEPTDGARAEVEKTTAAVDKGTVPGPVTPLAGIMRGRKTT---PXXXXXXXXXXXAGSTLHVTLLNTDQAKRARTSSTDDGAATADGSVEDGCAATEVLREQQDHGIDTARLAGIAGWDAREDEVQADEEAAGAFRLEFEGDEQGDGLDGGGATAMPTTSREGGTAAAKRLRMEARRKFLAARTVTSTQAASKARTETVGRLLDVKREDVKAKRAAEAASGVVAXXXXXXXXXXXXXX-SQVEKALALKKADELLEESGKAEDIRQRRGSLGTLRPED 2587
BLAST of mRNA_H-paniculata_contig235.6344.1 vs. uniprot
Match: A0A7S3ZQ52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQ52_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 7.480e-9 Identity = 79/256 (30.86%), Postives = 111/256 (43.36%), Query Frame = 1
Query: 6733 DPEKPDPD------------LFRRRSSALGESVMS--DSACATA-IWKPYSFDERTLELQLACVHPKVCLLAALVGVGVPDPEDVSTLLSHKKTRWEAFSRWYFPPDVEMTIAPHRQVLLDGEMEAATTDEAIRDGLIGEGLEPDDCEETDFLAWYCDEGAVPRRE-FRRRRVNEMLQARRLLAMQALAYMPMP-----FVFTELP---VPFPPPHPREIDRFQFFPSSSLERFSLTDVLRWYGKDELDKEDAVLR 7428
D E PDPD + +R +S+ + D TA +W R EL+LAC+ P V A + VP+PED T + +R E F +WY D E +V + E + A D+ + D +G+ D F WY GA P R F + L RR A + L F+ LP VP PP P R+Q +PS+S ER+S+ ++LRWY D L +E +LR
Sbjct: 23 DDELPDPDDIELFGDFDEDVVIKRADQMALDSLENREDKGEPTAPLWDSLDSTSRNNELRLACLLPDVVGSALEQMIQVPEPEDFET--PERLSRVEVFVKWY-STDAET----RNRVFTEFECKRAHEDQDVLDKAEADGIPGLDQCSNAFKRWY---GASPMRAVFLAKAAENELCKRRFRACRDLPGSTPDSNQNQFLILSLPPLAVPARPPPPPI--RYQVYPSTSDERWSVNEMLRWYSADRLQRELDLLR 266
BLAST of mRNA_H-paniculata_contig235.6344.1 vs. uniprot
Match: A0A7S4E596_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E596_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.070e-8 Identity = 79/256 (30.86%), Postives = 111/256 (43.36%), Query Frame = 1
Query: 6733 DPEKPDPD------------LFRRRSSALGESVMS--DSACATA-IWKPYSFDERTLELQLACVHPKVCLLAALVGVGVPDPEDVSTLLSHKKTRWEAFSRWYFPPDVEMTIAPHRQVLLDGEMEAATTDEAIRDGLIGEGLEPDDCEETDFLAWYCDEGAVPRRE-FRRRRVNEMLQARRLLAMQALAYMPMP-----FVFTELP---VPFPPPHPREIDRFQFFPSSSLERFSLTDVLRWYGKDELDKEDAVLR 7428
D E PDPD + +R +S+ + D TA +W R EL+LAC+ P V A + VP+PED T + +R E F +WY D E +V + E + A D+ + D +G+ D F WY GA P R F + L RR A + L F+ LP VP PP P R+Q +PS+S ER+S+ ++LRWY D L +E +LR
Sbjct: 1765 DDELPDPDDIELFGDFDEDVVIKRADQMALDSLENREDKGEPTAPLWDSLDSTSRNNELRLACLLPDVVGSALEQMIQVPEPEDFET--PERLSRVEVFVKWY-STDAET----RNRVFTEFECKRAHEDQDVLDKAEADGIPGLDQCSNAFKRWY---GASPMRAVFLAKAAENELCKRRFRACRDLPGSTPDSNQNQFLILSLPPLAVPARPPPPPI--RYQVYPSTSDERWSVNEMLRWYSADRLQRELDLLR 2008 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig235.6344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig235.6344.1 >prot_H-paniculata_contig235.6344.1 ID=prot_H-paniculata_contig235.6344.1|Name=mRNA_H-paniculata_contig235.6344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2502bp YVAGIFAEAGIVLFDVASGLVEKHVLDTSTEGNGGGKILAAAWNGDTCSLback to top mRNA from alignment at H-paniculata_contig235:12570..27244+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig235.6344.1 ID=mRNA_H-paniculata_contig235.6344.1|Name=mRNA_H-paniculata_contig235.6344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14675bp|location=Sequence derived from alignment at H-paniculata_contig235:12570..27244+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig235:12570..27244+ >mRNA_H-paniculata_contig235.6344.1 ID=mRNA_H-paniculata_contig235.6344.1|Name=mRNA_H-paniculata_contig235.6344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=15012bp|location=Sequence derived from alignment at H-paniculata_contig235:12570..27244+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |