mRNA_H-paniculata_contig2347.6337.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2347.6337.1
Unique NamemRNA_H-paniculata_contig2347.6337.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: D7FUB3_ECTSI (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB3_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 1.750e-92
Identity = 143/189 (75.66%), Postives = 160/189 (84.66%), Query Frame = 2 
Query:  251 AMATSSVENTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVKHAKFQSSEGLMSKITG 817
            A +T++   TITL AGCFWCVEAVYQRVVGV SVESGYMGG V NPSYGQICTG TGHAE IQLKY P+ VS T+LLEIFFKMHDPTTKNRQGADVGTQYRSAIFYH ++Q +AA+ VIAAVQ KF   IVTEV AAS ++ ADKGHQDYY RNKS+N YC+LVIHPKLSKVKH K++S  G+MSK+ G
Sbjct:    4 ASSTAAGLETITLGAGCFWCVEAVYQRVVGVESVESGYMGGIVNNPSYGQICTGETGHAEVIQLKYKPSKVSPTDLLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHSEEQKQAAEEVIAAVQPKFGSKIVTEVTAASDFFVADKGHQDYYSRNKSSNGYCRLVIHPKLSKVKHDKYKSP-GVMSKVLG 191
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: A0A840V7S4_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Haloferula luteola TaxID=595692 RepID=A0A840V7S4_9BACT)

HSP 1 Score: 213 bits (541), Expect = 2.230e-63
Identity = 97/163 (59.51%), Postives = 123/163 (75.46%), Query Frame = 2 
Query:  281 ITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVK 769
            ITL AGCFWCVEAV+ ++ GV S  SGYMGG  E+P+Y Q+CTG TGHAE +Q+ +DPA  SA  +L+ F+++HDPTT NRQGADVGTQYRSAIFYH ++Q K A+    A Q +F   IVTE+  AST+Y A+  HQD+Y +NK+ NPYC+ VI PKL K+K
Sbjct:   39 ITLGAGCFWCVEAVFAQIEGVQSATSGYMGGTTESPTYQQVCTGETGHAEVVQIVFDPAKTSAARILDWFWELHDPTTLNRQGADVGTQYRSAIFYHSEEQKKVAEASKEAAQKEFTDPIVTEITPASTFYPAENYHQDFYFQNKTKNPYCRAVIEPKLRKLK 201
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: A0A6H9XVC2_9PROT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Betaproteobacteria bacterium SCN2 TaxID=2651628 RepID=A0A6H9XVC2_9PROT)

HSP 1 Score: 206 bits (524), Expect = 3.410e-61
Identity = 96/164 (58.54%), Postives = 122/164 (74.39%), Query Frame = 2 
Query:  275 NTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKV 766
            +T TLA GCFWC+EAV+ R+ GV SV SGYMGG+  NPSY  +C G+TGHAE +Q+KYDPA +S T+LLE+FF +HDPTT N+QG+D GTQYRSAIFYH  +Q  AA+  I A Q  +P  IVTE+ AA T+YAA+  HQDY+  N +  PYC+ V+ PK+ K 
Sbjct:    7 DTATLAGGCFWCLEAVFDRLKGVESVVSGYMGGETANPSYRDVCAGSTGHAEVVQIKYDPAVISYTDLLEVFFTIHDPTTLNQQGSDRGTQYRSAIFYHSPEQLAAAEAAIRAEQPDWPDPIVTELAAAETFYAAEDYHQDYFANN-TFQPYCQFVVAPKVRKA 169
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: UPI0017828739 (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Pelagicoccus enzymogenes TaxID=2773457 RepID=UPI0017828739)

HSP 1 Score: 206 bits (525), Expect = 4.060e-61
Identity = 104/178 (58.43%), Postives = 126/178 (70.79%), Query Frame = 2 
Query:  245 SSAMATSSVEN----TITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKV 766
            S+ MAT   E+    TITL AGCFWCVEAVYQR+ GV S  SGYMGG VENP+Y  + TG TGHAE IQ+K+DP       L++ F++ HDPTT NRQGADVGTQYRSAIFY  ++Q + A+  +AA   KF R IVTE+  AST+Y A+  HQ+YY  NKS  PYC+ VI PKL K+
Sbjct:   16 STLMATDPTESKELETITLGAGCFWCVEAVYQRLDGVESAVSGYMGGHVENPTYKAVTTGRTGHAEVIQVKFDPKVTDLRTLIDFFWEAHDPTTLNRQGADVGTQYRSAIFYESEEQKQVAEASLAAAAKKFSRPIVTEITPASTFYEAEDYHQEYYELNKSY-PYCRAVITPKLKKL 192
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: A0A7C3THX3_9ARCH (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Nitrososphaerales archaeon TaxID=2268197 RepID=A0A7C3THX3_9ARCH)

HSP 1 Score: 205 bits (522), Expect = 5.050e-61
Identity = 92/162 (56.79%), Postives = 122/162 (75.31%), Query Frame = 2 
Query:  284 TLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVK 769
            T  AGCFWC+EAV+QR+ GV SV SGY GG+VENP+Y ++C+G TGHAE +Q+ +DP  +S  E+L++F+K+HDPT+ NRQG D GTQYRS I YHD++Q + A+   A V  KF + IVTE+   + +Y A+  HQDYY RN+ N PYC+LVIHPKL K+K
Sbjct:    8 TFGAGCFWCIEAVFQRIKGVKSVISGYSGGKVENPTYEEVCSGRTGHAEVVQITFDPKVISYEEILDVFWKVHDPTSLNRQGPDEGTQYRSIILYHDEEQKRIAEKSRAEVSKKFDKPIVTEIRPLTKFYKAEDYHQDYYNRNR-NAPYCRLVIHPKLEKLK 168
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: UPI0005561C17 (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Hugenholtzia roseola TaxID=1002 RepID=UPI0005561C17)

HSP 1 Score: 205 bits (521), Expect = 1.160e-60
Identity = 97/167 (58.08%), Postives = 123/167 (73.65%), Query Frame = 2 
Query:  275 NTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSK--FPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVK 769
            +T+TL AGCFWCVEAV+QRV G+  V SGYMGG ++NP+Y +ICTG TGHAE +QL Y+P  +S  E+L IFF  HDPTT NRQGADVGTQYRSAIFYH   QA+ A  ++A ++ +  FP  IVTE+  A+ +Y A+  HQ+YY  N+S  PYC  VI PK+ K+K
Sbjct:   11 DTLTLGAGCFWCVEAVFQRVEGIEKVVSGYMGGSLKNPTYREICTGRTGHAEVVQLFYNPTKISVAEILAIFFGTHDPTTLNRQGADVGTQYRSAIFYHSQAQAQTATQIVAELEKEKIFPDPIVTEITPAAAFYKAEDYHQNYYNENQSQ-PYCNFVITPKIEKLK 176
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: UPI001B8B6857 (Peptide-methionine (S)-S-oxide reductase MsrA n=2 Tax=Luteolibacter ambystomatis TaxID=2824561 RepID=UPI001B8B6857)

HSP 1 Score: 206 bits (523), Expect = 1.260e-60
Identity = 95/166 (57.23%), Postives = 123/166 (74.10%), Query Frame = 2 
Query:  272 ENTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVK 769
            +  +TL AGCFWCVEAV++++ GV+SV SGYMGG+V+NP+Y Q+C  NTGHAE +Q+ YDP  VS  ++L+ F+K+HDPTT NRQG DVGTQYRSAIFYH D Q  AA+    A Q  F   IVTE+  A  ++ A+  HQDYY +NK+ N YC++VI PKL K+K
Sbjct:   41 DEVVTLGAGCFWCVEAVFKQIDGVASVTSGYMGGKVKNPTYQQVCEENTGHAEVVQIVYDPKKVSLEKILDWFWKLHDPTTLNRQGNDVGTQYRSAIFYHTDAQKTAAEAAKKAAQKDFTDPIVTEITKAGDFWPAENYHQDYYFQNKNKNGYCRVVIEPKLKKLK 206
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BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: A0A1W9J330_9BACT (Peptide methionine sulfoxide reductase MsrA n=5 Tax=Nitrospira TaxID=1234 RepID=A0A1W9J330_9BACT)

HSP 1 Score: 204 bits (519), Expect = 1.960e-60
Identity = 95/171 (55.56%), Postives = 127/171 (74.27%), Query Frame = 2 
Query:  263 SSVENTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAV--QSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVK 769
            S+    ITLA GCFWC+EAVY ++ GV SVESGY+GG +ENPSY  +C G TGHAEA+++ YDP+ +S  EL+EIFF +HDPTT NRQG D GTQYRSAIFYH  +Q + A+ V AA+  Q+ +P  +VTE+ AA+TWY A++ HQ+Y+ RN     YC+ V+ PK++K +
Sbjct:    2 STGSEVITLAGGCFWCLEAVYDQIKGVLSVESGYIGGALENPSYEAVCGGRTGHAEAVRVTYDPSLISCRELIEIFFSIHDPTTLNRQGNDEGTQYRSAIFYHSPEQRQVAEAVKAAIIAQAVYPNPVVTEIVAATTWYEAERYHQEYFARNPLQG-YCQFVVSPKVAKFR 171
[Close]
BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: A0A7Y1UIJ0_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=A0A7Y1UIJ0_9BACT)

HSP 1 Score: 204 bits (519), Expect = 2.160e-60
Identity = 94/164 (57.32%), Postives = 119/164 (72.56%), Query Frame = 2 
Query:  278 TITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVK 769
            TITL  GCFWCVEAVYQ++ GV S  SGYMGG +ENP+Y Q+C+  +GH E ++LK+DPA +   E+L  F+++HDPTTK+RQGADVG QYRS IFY DD Q K A+  + A Q  F   IVTE+  A+T+Y A+  HQD+Y  NK NN YC+ VI PKL K+K
Sbjct:   17 TITLGGGCFWCVEAVYQQLKGVHSATSGYMGGHIENPTYEQVCSKTSGHVEVVELKFDPAVIPLEEILSWFWELHDPTTKDRQGADVGPQYRSVIFYADDRQKKIAEASMKAAQEHFKDPIVTEIRKAATFYPAEAEHQDFYFLNKRNNGYCRAVIQPKLKKLK 180
[Close]
BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Match: A0A3M1HQ38_9CHLR (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HQ38_9CHLR)

HSP 1 Score: 204 bits (518), Expect = 3.140e-60
Identity = 100/184 (54.35%), Postives = 135/184 (73.37%), Query Frame = 2 
Query:  272 ENTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQICTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHDDDQAKAAQGVIAAVQSK--FPRDIVTEVNAASTWYAADKGHQDYYRRNKSNNPYCKLVIHPKLSKVKHAKFQSSEGLMSKITG 817
            + T TLA GCFWC+EAVYQ+V GV  V  GY GG+V NP+Y ++C+G TGHAEA+Q+ +DP  VS  +LL IFF +HDPTT NRQGADVGTQYRSAIFYHD++Q +AA+ +IA ++++  +P+ IVTEV  A  +Y A+  H+DY+RRN     YC++VI PKL+K +    QS   L+++  G
Sbjct:    3 QETATLAGGCFWCLEAVYQQVRGVDRVVPGYCGGRVPNPTYKEVCSGRTGHAEAVQITFDPEIVSFRDLLSIFFAIHDPTTLNRQGADVGTQYRSAIFYHDEEQRRAAEAMIAELEARQIWPQPIVTEVTRAGAFYPAEDYHRDYFRRNPYQG-YCRVVIAPKLAKFR----QSFAHLLAQSAG 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2347.6337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB3_ECTSI1.750e-9275.66Peptide-methionine (S)-S-oxide reductase n=2 Tax=E... [more]
A0A840V7S4_9BACT2.230e-6359.51Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A6H9XVC2_9PROT3.410e-6158.54Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI00178287394.060e-6158.43peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
A0A7C3THX3_9ARCH5.050e-6156.79Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI0005561C171.160e-6058.08peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
UPI001B8B68571.260e-6057.23Peptide-methionine (S)-S-oxide reductase MsrA n=2 ... [more]
A0A1W9J330_9BACT1.960e-6055.56Peptide methionine sulfoxide reductase MsrA n=5 Ta... [more]
A0A7Y1UIJ0_9BACT2.160e-6057.32Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A3M1HQ38_9CHLR3.140e-6054.35Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2347contigH-paniculata_contig2347:3491..8399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.2
Seed ortholog evalue1.1e-74
Seed eggNOG ortholog2880.D7FUB3
KEGG koko:K07304
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptide-methionine (S)-S-oxide reductase activity
EggNOG OGsCOG0225@1,KOG1635@2759
Ec32 ortholog descriptionPeptide methionine sulfoxide reductase
Ec32 orthologEc-03_000880.1
EC1.8.4.11
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons6
Model size1363
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2347.6337.1prot_H-paniculata_contig2347.6337.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2347 4022..8146 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929666.2126148-UTR-H-paniculata_contig2347:3490..40211622929666.2126148-UTR-H-paniculata_contig2347:3490..4021Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2347 3491..4021 -
1691480958.2574496-UTR-H-paniculata_contig2347:3490..40211691480958.2574496-UTR-H-paniculata_contig2347:3490..4021Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2347 3491..4021 -
1622929666.2960958-UTR-H-paniculata_contig2347:8146..83991622929666.2960958-UTR-H-paniculata_contig2347:8146..8399Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2347 8147..8399 -
1691480958.3211021-UTR-H-paniculata_contig2347:8146..83991691480958.3211021-UTR-H-paniculata_contig2347:8146..8399Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2347 8147..8399 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929666.2237551-CDS-H-paniculata_contig2347:4021..40901622929666.2237551-CDS-H-paniculata_contig2347:4021..4090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 4022..4090 -
1691480958.2747202-CDS-H-paniculata_contig2347:4021..40901691480958.2747202-CDS-H-paniculata_contig2347:4021..4090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 4022..4090 -
1622929666.2339635-CDS-H-paniculata_contig2347:4372..44661622929666.2339635-CDS-H-paniculata_contig2347:4372..4466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 4373..4466 -
1691480958.282463-CDS-H-paniculata_contig2347:4372..44661691480958.282463-CDS-H-paniculata_contig2347:4372..4466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 4373..4466 -
1622929666.2464712-CDS-H-paniculata_contig2347:5017..51341622929666.2464712-CDS-H-paniculata_contig2347:5017..5134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 5018..5134 -
1691480958.2903028-CDS-H-paniculata_contig2347:5017..51341691480958.2903028-CDS-H-paniculata_contig2347:5017..5134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 5018..5134 -
1622929666.260756-CDS-H-paniculata_contig2347:5822..59741622929666.260756-CDS-H-paniculata_contig2347:5822..5974Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 5823..5974 -
1691480958.2980518-CDS-H-paniculata_contig2347:5822..59741691480958.2980518-CDS-H-paniculata_contig2347:5822..5974Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 5823..5974 -
1622929666.272312-CDS-H-paniculata_contig2347:7199..73031622929666.272312-CDS-H-paniculata_contig2347:7199..7303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 7200..7303 -
1691480958.3055856-CDS-H-paniculata_contig2347:7199..73031691480958.3055856-CDS-H-paniculata_contig2347:7199..7303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 7200..7303 -
1622929666.2838447-CDS-H-paniculata_contig2347:8103..81461622929666.2838447-CDS-H-paniculata_contig2347:8103..8146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 8104..8146 -
1691480958.312955-CDS-H-paniculata_contig2347:8103..81461691480958.312955-CDS-H-paniculata_contig2347:8103..8146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2347 8104..8146 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2347.6337.1

>prot_H-paniculata_contig2347.6337.1 ID=prot_H-paniculata_contig2347.6337.1|Name=mRNA_H-paniculata_contig2347.6337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MATSSVENTITLAAGCFWCVEAVYQRVVGVSSVESGYMGGQVENPSYGQI
CTGNTGHAEAIQLKYDPAAVSATELLEIFFKMHDPTTKNRQGADVGTQYR
SAIFYHDDDQAKAAQGVIAAVQSKFPRDIVTEVNAASTWYAADKGHQDYY
RRNKSNNPYCKLVIHPKLSKVKHAKFQSSEGLMSKITGRYRK*
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mRNA from alignment at H-paniculata_contig2347:3491..8399-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2347.6337.1 ID=mRNA_H-paniculata_contig2347.6337.1|Name=mRNA_H-paniculata_contig2347.6337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4909bp|location=Sequence derived from alignment at H-paniculata_contig2347:3491..8399- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTCGCGATACGTTTAAATCAATCTGTTCAAATTCAAAAATCAAAAGAGA
AGCGCCGAGATGGGGGGCGAATTTCAACCGAGACCCGACACACCAGCACG
AAGTAAACCTTTACCATCCCCCACCACTTACAAAACACACAAAGCACTAC
CGCCGTTGAGAGCTATCATCTACAGCGACAACAGAAGAAGCTAAACAGTA
CTGCGAGGGAGGCCGGTGCCATCCATCATTCCGTAACTTGAATCAGCAGT
GCGATGGCGACCTCCTCCGTCGAGAATACGATCACCCTCGCAGCAGGTAC
GGTCGGGAGAAGGGAAACAAGCAAACTAACGAGGGCGGCGCAGTATTGTA
GTGTACTCTTGCGCTCTCTAGTGTATTTTCTTGCAGCCTCGGTATACCCC
TCTAGCTATATCTCGTAGTAAAGGAAGCTCCAATAGCTGCAGCAAGAAGC
GGATCCGATTATATGTAGAAGTTTAGGATCGCTTTCGTCTTAGGTTGAAA
ATCTTTCGAAGACTGCAATATTTCTGATCGCAAAGGGCCGAGGGGCATAA
GCACTTGTTTTCTTGAATAGCTATCGAACACGCCTACTATAAAATTGGAT
TGGCGAATCTCGAGATGTTGGGGGCTAGCTTGTATAATCGGCTTTTCGCT
GATGACACATCACGTATGCAAGGTTGTATCATTCATCACATTTTAGAGAG
AGATGCAGTTGGCTTCATGACACTACGTCTGACATGAAATTGCAGTGAGA
AGGAGAGTCATCATGGGAATGTGGGTGAAACGGTAACCAACACATGCAAT
AGCTATAGACCGAGTAGGTTGATTTGTCGTAGCCACTGTACTGCACTATT
GGTATTTTCACTGACTGACTGCATTGGACTGGACTGAACTAGGCTGAGCT
GACTTTTGGTCTTTTGGTATATGGAATAATCTAGAACCTACTTCGAGCCG
CGAACCGTTTTAGACTCTACGGTACAACTGACTGGTTGATTATTTTTACG
ACGTACCCACTCCTCAGCAACTTCAAGCTACTGTATTGTTCATCTCCAAT
ACGATAGCCTGCTGCATGACCGGTGTATCCGTATTCTGCTGTGCAGGTTG
TTTCTGGTGCGTGGAGGCTGTCTACCAGCGCGTTGTTGGTGTGTCGAGCG
TAGAGAGTGGCTACATGGGAGGACAGGTTGAGAATCCCTCTTACGGACAG
GTGAGATCGAGAATATATTATGTCGAAAGGCCACCTCACTACTCTACATC
ACGAGGCATTTACGAACGCACTTATATACCCTCGTCATTTTGACAAGAAT
GAAGAAGTATTATATAAAATACAAGCAGAACACACATGCGTACACTACAC
CACAAACAGTCCTTAACCCCACTCCTAGACATAGTGTGCATCGGCAGAGC
TCAAGTCAGCGTCGTTGGTACCAATTTGAGCAAAAACATGGGCTGTCAAG
GTGGTGGCCTCGTGACGACTCTTCTTGCATGTATTTTTTGTCGTCTTCTC
GGGGCACTTTGAACAGATTTAAACTCGCGCAAAAAATGATTTTTAGACAG
TCTCTACGCTGTTAAATGTAGCCGTGTCTTTTCCATAATAAAGCGCCGGA
ACTGTTTGAGATTTTTTTCGCGCGATTTTACGTTCTATGGTGTCTCGACA
AGACTCGGCCTTGGTGTAGTCGTATCAAAAGCCCTACAAAAAAAGTGAGA
GGAAAAATCGGGTTGACTCGACTCGCTCTCTTCCGTGTAAAAAGTGAGAA
AAAAATCATCTAAAAGAACCATCCACAAAGTACTGTACGCGCTATTCCCT
GTGTATCTACTTCCCAAATACCTACTACGCTCGAAATCAACCTTCCAGCT
GTGTGAACTCGTTTTTTTGTAACCTGTACGTAGAGATCAAGAAATATGTT
GGTCAGCAAAAGTGAGCGGCGATGGTTGCCGCCGGCGTTACGCCAATCAA
AACGGTGTATAATCATTACCCGCTCGAATTTTTTCGTTTATTCTTTTCAT
TTACAGGGCATAAGGACACGGCTCTATCTTAGTGGCGCCCATGGATGCTA
CGCCAATCAGAACGTCGTATAGCTCCAAGTATCTGATTTCTTATTTCTCG
TTTTTCGGGTCAAGACGCGGCCTCAGGTCATTTCTAATCGGCGTTCGATT
TTTGCTATCGAACGTTTATTCATGCCAGAAGACATTGCAGTGGTTTGCTA
TGGATAGTAATATATATATATATATATATATATATATAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGGGGGGGAGAGAGAGAGAAAGAGAGATAAA
TGGCTTCAGCTGTCCAGTCTCCGACGCCGACGAGAAACGGACTTACTTAG
CAAAGTATAGTGTAAATATTAGTAACAAACAGCATTATTCCTTTGGTTAA
AGTCATGATCTTACCCCACGTCCAGATTTGCACGGGCAACACCGGACACG
CAGAGGCTATTCAGCTCAAGTACGACCCTGCGGCGGTGTCGGCGACCGAG
CTGCTAGAGATTTTCTTCAAGATGCATGACCCCACCACTAAGAACCGACA
AGGTGCCGATGTCGGCACTCAATACAGGTATGTAACGTATGTAATATTCT
TCTCTGAAAGCTGTAGCATCAACAAGCAGGCGGATGCTGTAGAGACTGTC
GTATCATACACAATCGGATAATCGAAACGCGCAGGCGTTAAGGAATCATT
CCTTTCTACGGCTCTCACAACGGTGGGAGAAATTTTGTGGGTGGATCGCA
CTCGGTAAACCATGTCTGCCCGGAAATGTGCAAGTTTCAGGTGTGGTTTT
ATTTGAAAGCTGCATAATCAAATTTGCGTACATGTAAAATTTTTAATTTA
GCATTGACTGCTAGGAATTTTTCTAAATCATTATAAATCTCAAAAAGTTT
AAACTTGCACGGAAAAAAGTGGCTGACAGGATAGGGCTCGACTTGCACTT
GTTTCGATCATATATCATATCTTTGCTAGACGGTGTTAATTTTGGCATGA
CCGATGGACTGGGCAACTTGTAAGACAGAACGGATAATATTTGCAGGTTA
AAATGTAATTTGATCGTATGAGCAGCATTACTTGGCCATGTGGTGATGCT
ATCTGAGGGAGTCCTCTGTAAGTGTAGCGATGACCAGCGGATAGCTGCCC
GTTATTGAACTCCCCTGTTCAAGATGGAGTGATACATCCGGTTTTTCATT
TCACACCGTCCCTGTGTAAAATACCATCGATCAATACTGTCTCGCGCTTT
TTTTCGATCCAACAGGAGCGCGATATTTTACCATGACGATGACCAGGCCA
AAGCGGCGCAAGGAGTCATCGCGGCAGTCCAGTCAAAGTTTCCAAGGGAT
ATCGTAACAGAAGTGAATGCTGCCAGCACATGGTACGTAATGTTTCAATA
ATTTCACCGTGTAATTTGGCTATATACGCCCGTGGACTCTTCGTGGTGAT
AGTATACGCACCTTTTAGAGAGAGGGAACAGGTGCCCACGGTTTCCCTGT
TGGTCGTTCTTTATAAGGAATCATCTGATAGACAGACGACGTTACTTATG
GACGTGACATCGCTGTTCGACAGAGCTCAGCGGTTATTTTTCATTCCCTT
TTTGAAATGAACCATGTCCTACAGCATTCACTCTCCGAATAATATTATAG
GTTAATTCGTGTGTTAAAAGCAGAGAAATCTACGAAATCATTAGCCCAGC
CAATCAAGTCGGGTCCTTTGACTCGCGTTAAAAACCGCCCATGTATGCCA
TCGAAATGGACAGGGCTGTGTTTACCTGATTGGTCATAGCGAAACGTATT
TTTCCGTGTGCGTCTTGCTTTGACTACTCTTCTCGGCGGAAGTGATTCGA
ATTTCCCGCTTGAACAACGGCGCTATCCGCGTATGCTAGAATATTTATGA
CTGGCTGAATGTTGCCTCGACCGCTGTCCGCAGGTACGCGGCTGACAAGG
GGCACCAGGACTACTACCGGCGAAATAAGAGCAACAACCCATACTGCAAG
CTTGTCATCCACCCCAAGCTTTCCAAGGTAAAAAAATGACGCCATGACAT
TTTGACGAGACTTGGGATTCGGAAGGTTTCGAAACTAAGGGTGTGTGTGG
ATGCCACATGTAGTCGTATTCTACTGATTTTCCAGCAAAAGCAGTCAATC
CTCATTTAAGCACGGCATGAAACAATGGTAAACTGCAGGTACATACTCGA
ATACTGCCACAGTCACTGCCGATGTCACTGTCGCTATAATGTTTCTAGCA
CTTTTGTTTGCCGTCCCCAACGTTTTCTTCTGCACATTCCAATATCCCGA
CGACTGCAGGTGAAGCACGCTAAATTCCAGAGCTCAGAGGGGCTCATGTC
CAAGATCACAGGTCGCTACCGTAAATAGAGCCACGGTGGCTGAGCGAGGC
ACAACTGACACCGGGAATCCCAAAGTTGGATTCCGTAATCTTTGAACTCG
GAATAGACGGTATTTGTTGGATGTTATCTGAATGATGTTATTTCTCTGAG
TATATCTGGGCGGACCTCCGTGAAGCTGGACTGGGATCACGGAGGATCTA
GCGTTGTGTCTTACTAGGTGTATTGCCAGGGGGGACTTTGATCACGCACT
TCAACAATAGAGCTGTGGGGAGCGGGGGGCGGGTATCAAGATTGTGTGAA
AAGCTGCATGAATGTGCCCGTTAACTGTACTACCCCACCCTAACAAGCGG
GGCGTGCTTGCGTTTTTGCCGTACAGTTCCTGCATGTTTTGAAACATTTA
ACAGTTATAATCGCTAATCGGTATGCGTGCGCCCTGCGTGCGCGGGTAGG
TACTATGTTTGGGAGCAATACAGCGTATAATAGTCCGTTTTAGGATGTAG
GACACTGGTTTTGGACGATCCATTAATAAAACAGGTGAATTGCCGCAGTT
AATCTTTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig2347:3491..8399-

>mRNA_H-paniculata_contig2347.6337.1 ID=mRNA_H-paniculata_contig2347.6337.1|Name=mRNA_H-paniculata_contig2347.6337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig2347:3491..8399- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGACCTCCTCCGTCGAGAATACGATCACCCTCGCAGCAGATGGCGA
CCTCCTCCGTCGAGAATACGATCACCCTCGCAGCAGGTTGTTTCTGGTGC
GTGGAGGCTGTCTACCAGCGCGTTGTTGGTGTGTCGAGCGTAGAGAGTGG
CTACATGGGAGGACAGGTTGAGAATCCCTCTTACGGACAGGTTGTTTCTG
GTGCGTGGAGGCTGTCTACCAGCGCGTTGTTGGTGTGTCGAGCGTAGAGA
GTGGCTACATGGGAGGACAGGTTGAGAATCCCTCTTACGGACAGATTTGC
ACGGGCAACACCGGACACGCAGAGGCTATTCAGCTCAAGTACGACCCTGC
GGCGGTGTCGGCGACCGAGCTGCTAGAGATTTTCTTCAAGATGCATGACC
CCACCACTAAGAACCGACAAGGTGCCGATGTCGGCACTCAATACAGATTT
GCACGGGCAACACCGGACACGCAGAGGCTATTCAGCTCAAGTACGACCCT
GCGGCGGTGTCGGCGACCGAGCTGCTAGAGATTTTCTTCAAGATGCATGA
CCCCACCACTAAGAACCGACAAGGTGCCGATGTCGGCACTCAATACAGGA
GCGCGATATTTTACCATGACGATGACCAGGCCAAAGCGGCGCAAGGAGTC
ATCGCGGCAGTCCAGTCAAAGTTTCCAAGGGATATCGTAACAGAAGTGAA
TGCTGCCAGCACATGGAGCGCGATATTTTACCATGACGATGACCAGGCCA
AAGCGGCGCAAGGAGTCATCGCGGCAGTCCAGTCAAAGTTTCCAAGGGAT
ATCGTAACAGAAGTGAATGCTGCCAGCACATGGTACGCGGCTGACAAGGG
GCACCAGGACTACTACCGGCGAAATAAGAGCAACAACCCATACTGCAAGC
TTGTCATCCACCCCAAGCTTTCCAAGGTACGCGGCTGACAAGGGGCACCA
GGACTACTACCGGCGAAATAAGAGCAACAACCCATACTGCAAGCTTGTCA
TCCACCCCAAGCTTTCCAAGGTGAAGCACGCTAAATTCCAGAGCTCAGAG
GGGCTCATGTCCAAGATCACAGGTCGCTACCGTAAATAGGTGAAGCACGC
TAAATTCCAGAGCTCAGAGGGGCTCATGTCCAAGATCACAGGTCGCTACC
GTAAATAG
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