prot_H-paniculata_contig23459.6331.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23459.6331.1
Unique Nameprot_H-paniculata_contig23459.6331.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A6H5JNV3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNV3_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.470e-36
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPKRREGNRLSMILFPK 83
            MKEVKMSYKIE HDY VR++N +KFV QG+RVR+VV FRGREQSHMDLG VLLDKV  D++GLA  EPKRREGNRLSMI+FPK
Sbjct:  203 MKEVKMSYKIETHDYMVRLRNAQKFVKQGHRVRIVVTFRGREQSHMDLGNVLLDKVTNDLEGLALVEPKRREGNRLSMIVFPK 285          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A836C915_9STRA (Translation initiation factor IF-3, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C915_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.060e-29
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            MKEVKMSYKIE HDY VR++N KKF+AQG+RV+VVVQFRGREQ HMDLG  LL K+V D +G    + + +REGNRLS+IL PK
Sbjct:  182 MKEVKMSYKIEDHDYQVRLRNAKKFIAQGDRVKVVVQFRGREQQHMDLGHELLTKIVADCEGTVATDGRPKREGNRLSLILAPK 265          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A6V1LHA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LHA9_HETAK)

HSP 1 Score: 102 bits (254), Expect = 7.380e-25
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPKRREGNRLSMILFPK 83
            +KEVKMSYKIE+HDY VR K   KF+  G+RV+++VQFRGREQ HMDLG  LL ++  D++ LA  EP RREGNRL+M+L P+
Sbjct:  143 LKEVKMSYKIEKHDYEVRAKAATKFLKGGHRVKLLVQFRGREQQHMDLGRDLLGRLSGDVEDLALPEPIRREGNRLTMLLTPR 225          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A7S2H9R6_9STRA (Translation initiation factor IF-3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H9R6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.110e-20
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPKRREGNRLSMILFP 82
            MKEVKMSYKI+ HDY VR K   KF+  G+RV+ VVQFRGREQ H++LG  LL K+ +D    A ++  RREGNR+ M + P
Sbjct:  145 MKEVKMSYKIDTHDYMVRQKAAIKFLKSGSRVKAVVQFRGREQQHINLGQELLKKLSEDCKEFATSDRPRREGNRVVMFINP 226          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: W7TKZ8_9STRA (Translation initiation factor if-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKZ8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.570e-20
Identity = 48/84 (57.14%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            +KEVKMSYKIE HDYGVR+K + +F+ +G++V+V++QFRGREQ H+DLG  LL KV  D+  LA  E   RREG RL  +  PK
Sbjct:  249 VKEVKMSYKIENHDYGVRMKQMTRFLDEGDKVKVMIQFRGREQQHIDLGHELLGKVGGDLKELAVQEGVVRREGGRLIALFKPK 332          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A7S3KWM0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWM0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.680e-19
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            +KEVKMSYKI+ HDY VR KN  KF+ QG+RV+  V FRGRE  H +LG  LLDK+ +++  LA  E + +REG  LS+IL P+
Sbjct:  143 LKEVKMSYKIDIHDYSVRKKNAAKFLQQGDRVKCTVMFRGREVQHDNLGFELLDKMAEELSNLAAKEGRPKREGRNLSLILGPR 226          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A7S2MWU2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MWU2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.250e-19
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            +KEVKMSYKI+ HDYGVR KN  KF+ QGNRV+  V F+GRE  H +LG  LL+K+ +DM  +   + K +REG  LS  + PK
Sbjct:  175 VKEVKMSYKIDVHDYGVRKKNASKFINQGNRVKCTVMFKGREVQHDNLGYDLLNKLAEDMQDICTMDGKPKREGRNLSCFVVPK 258          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A448ZK50_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK50_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.980e-19
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            +KEVKMSYKI+ HDY VR KN  KF+ QGNRV+  V FRGRE  H  LG  LLDK+ ++M+ +   E + +REG  LSMI+ P+
Sbjct:  161 IKEVKMSYKIDVHDYEVRKKNALKFLKQGNRVKCSVMFRGREVQHDKLGYELLDKLAEEMEDMCTREGRPKREGRNLSMIVTPR 244          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: A0A0P7ZU86_9CYAN (Translation initiation factor IF-3 n=5 Tax=Phormidium TaxID=1198 RepID=A0A0P7ZU86_9CYAN)

HSP 1 Score: 84.7 bits (208), Expect = 1.070e-18
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            +KEVKM YKIE HDY VRVK  ++F+  G++V+  V FRGRE  H DL   LL+++ KD+D +A  + + +REG  + M+L PK
Sbjct:   93 LKEVKMRYKIEDHDYMVRVKQAQRFLKSGDKVKATVMFRGREIQHTDLAYQLLERLAKDLDDMAEVQQRPKREGRSMMMMLAPK 176          
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Match: UPI0002ABCB49 (translation initiation factor IF-3 n=1 Tax=Leptolyngbya sp. PCC 6406 TaxID=1173264 RepID=UPI0002ABCB49)

HSP 1 Score: 84.0 bits (206), Expect = 1.900e-18
Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    1 MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGTVLLDKVVKDMDGLANAEPK-RREGNRLSMILFPK 83
            +KEVKM YKI+ HDY VRVKN ++F+  G++V+  + FRGRE  H DL   LL ++ KD+D +A  +   +REG  + M+L PK
Sbjct:   90 VKEVKMRYKIDDHDYNVRVKNAQRFLQSGDKVKATIMFRGREIQHSDLAEQLLRRMAKDLDAVAEMQQAPKREGRNMMMMLSPK 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23459.6331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNV3_9PHAE2.470e-3678.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C915_9STRA9.060e-2967.86Translation initiation factor IF-3, C-terminal dom... [more]
A0A6V1LHA9_HETAK7.380e-2561.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H9R6_9STRA4.110e-2056.10Translation initiation factor IF-3 n=1 Tax=Dictyoc... [more]
W7TKZ8_9STRA6.570e-2057.14Translation initiation factor if-3 n=2 Tax=Monodop... [more]
A0A7S3KWM0_9STRA4.680e-1954.76Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2MWU2_9STRA5.250e-1953.57Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A448ZK50_9STRA8.980e-1954.76Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A0P7ZU86_9CYAN1.070e-1848.81Translation initiation factor IF-3 n=5 Tax=Phormid... [more]
UPI0002ABCB491.900e-1847.62translation initiation factor IF-3 n=1 Tax=Leptoly... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 1..84
e-value: 2.2E-21
score: 74.2
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 2..82
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyGENE3D3.30.110.10coord: 1..85
e-value: 1.2E-27
score: 97.6
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilySUPERFAMILY55200Translation initiation factor IF3, C-terminal domaincoord: 1..83
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 1..83
e-value: 3.9E-26
score: 90.8
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23459contigH-paniculata_contig23459:227..1860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23459.6331.1mRNA_H-paniculata_contig23459.6331.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23459 212..1860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23459.6331.1 ID=prot_H-paniculata_contig23459.6331.1|Name=mRNA_H-paniculata_contig23459.6331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MKEVKMSYKIEQHDYGVRVKNVKKFVAQGNRVRVVVQFRGREQSHMDLGT
VLLDKVVKDMDGLANAEPKRREGNRLSMILFPKTLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001288Translation_initiation_fac_3
IPR036788T_IF-3_C_sf
IPR019815Translation_initiation_fac_3_C