Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 976 |
| Cds size | 975 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10980.634.1 >prot_H-paniculata_contig10980.634.1 ID=prot_H-paniculata_contig10980.634.1|Name=mRNA_H-paniculata_contig10980.634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
APVYGVDAASGFVNGAWGSARASRFGECRANIRKGGAKASGSSIEARCCT
YSFQLNARGKGPAGRARGTSDTDSTQFNASSKTTAGHQHSLSRDKRLLTD
KLKRALRPDSSLFKTSTARNKKSGSRMPVSRPVDPTDPLRFLSTSQRQRL
KLGQQLSPSSELRSASKNPPQHPPPPLPAATSPSPGTSNNTSRSTAMPAS
KSGGPAIPTPLPSPGKMPGPEHIQCAALNGARGKLSMTETDRISATGATA
EGLSAIIGGSEGGVTEAAVAIPGKSKGIRMRQFVPGRRTTSGEDDSTNAS
ASIPEGNGEGEAKRSMHHGAGRDSR back to topmRNA from alignment at H-paniculata_contig10980:5417..6730+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10980.634.1 ID=mRNA_H-paniculata_contig10980.634.1|Name=mRNA_H-paniculata_contig10980.634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig10980:5417..6730+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTCCGGTCTATGGGGTCGACGCTGCTTCTGGCTTCGTGAACGGGGCCTG
GGGTAGTGCACGGGCGAGCCGATTCGGAGAGTGCAGAGCGAACATTCGGA
AAGGGGGGGCTAAGGCTAGCGGGAGCTCGATAGAGGTGTAGTGTGCGCTA
TGCCTCTTGTGTGTTATTATTATTATTATTATTATTATTATTTTTTGGTG
GGGTTTGGGAAAAAGTAACTTGCGGGTGGGACCCTTGACACCCGATGCTC
CCGATAGTAAAAGTAGCACAGTAGTCAGTCAACTGTCGGTACATGGAAAA
ATAACTAAAACAGCGCTGGTTTTAGTCGTTCGGGCAAGCTCCAGAGGTGG
CTGAAGGTGAACTTGGTCGCACTGTGCCTGGCGACGCGACATGTTTGCTA
TCCTCTCGATCCCCCTCTCTCTCCCGAGTCAGGACTGCGTTTTAACCACC
CTCCCAAAAAACAAACAAAACAGGCAAGGTGCTGCACGTATTCGTTTCAG
CTGAATGCTCGCGGCAAAGGGCCAGCAGGGAGGGCACGAGGGACGTCAGA
CACAGACAGTACACAATTTAACGCGAGCAGTAAAACGACAGCGGGTCACC
AACACAGCCTATCGAGGGACAAACGCCTCCTGACCGATAAGCTGAAGCGA
GCCCTTCGGCCGGACTCGTCGCTGTTCAAGACAAGCACTGCCCGGAACAA
AAAATCGGGTTCTCGCATGCCCGTTAGCCGCCCAGTCGACCCCACCGACC
CCTTGCGATTTTTGAGTACCAGCCAGCGACAGCGATTGAAGTTGGGACAA
CAATTGTCCCCGAGCTCAGAGTTGAGGTCCGCGTCAAAGAACCCACCCCA
ACACCCACCACCACCATTGCCCGCGGCAACGAGTCCGTCACCAGGCACTA
GCAACAACACTAGTCGTAGCACCGCGATGCCAGCATCAAAATCGGGCGGT
CCAGCGATACCGACACCGCTACCAAGCCCCGGAAAGATGCCAGGGCCTGA
ACATATACAGTGTGCTGCTCTGAACGGAGCACGAGGGAAACTATCTATGA
CAGAGACGGACCGTATTTCGGCGACGGGGGCGACAGCAGAGGGACTGTCG
GCGATCATAGGGGGGAGCGAGGGAGGAGTTACAGAGGCCGCAGTAGCGAT
CCCGGGAAAGAGCAAGGGCATCCGTATGCGGCAGTTTGTACCCGGAAGGA
GAACTACATCGGGAGAAGATGATAGTACTAATGCTAGCGCTAGTATCCCC
GAGGGAAACGGGGAAGGGGAAGCGAAGAGGTCGATGCATCATGGTGCAGG
TAGGGACAGTAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10980:5417..6730+ >mRNA_H-paniculata_contig10980.634.1 ID=mRNA_H-paniculata_contig10980.634.1|Name=mRNA_H-paniculata_contig10980.634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig10980:5417..6730+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTCCGGTCTATGGGGTCGACGCTGCTTCTGGCTTCGTGAACGGGGCCTG
GGGTAGTGCACGGGCGAGCCGATTCGGAGAGTGCAGAGCGAACATTCGGA
AAGGGGGGGCTAAGGCTAGCGGGAGCTCGATAGAGGCTCCGGTCTATGGG
GTCGACGCTGCTTCTGGCTTCGTGAACGGGGCCTGGGGTAGTGCACGGGC
GAGCCGATTCGGAGAGTGCAGAGCGAACATTCGGAAAGGGGGGGCTAAGG
CTAGCGGGAGCTCGATAGAGGCAAGGTGCTGCACGTATTCGTTTCAGCTG
AATGCTCGCGGCAAAGGGCCAGCAGGGAGGGCACGAGGGACGTCAGACAC
AGACAGTACACAATTTAACGCGAGCAGTAAAACGACAGCGGGTCACCAAC
ACAGCCTATCGAGGGACAAACGCCTCCTGACCGATAAGCTGAAGCGAGCC
CTTCGGCCGGACTCGTCGCTGTTCAAGACAAGCACTGCCCGGAACAAAAA
ATCGGGTTCTCGCATGCCCGTTAGCCGCCCAGTCGACCCCACCGACCCCT
TGCGATTTTTGAGTACCAGCCAGCGACAGCGATTGAAGTTGGGACAACAA
TTGTCCCCGAGCTCAGAGTTGAGGTCCGCGTCAAAGAACCCACCCCAACA
CCCACCACCACCATTGCCCGCGGCAACGAGTCCGTCACCAGGCACTAGCA
ACAACACTAGTCGTAGCACCGCGATGCCAGCATCAAAATCGGGCGGTCCA
GCGATACCGACACCGCTACCAAGCCCCGGAAAGATGCCAGGGCCTGAACA
TATACAGTGTGCTGCTCTGAACGGAGCACGAGGGAAACTATCTATGACAG
AGACGGACCGTATTTCGGCGACGGGGGCGACAGCAGAGGGACTGTCGGCG
ATCATAGGGGGGAGCGAGGGAGGAGTTACAGAGGCCGCAGTAGCGATCCC
GGGAAAGAGCAAGGGCATCCGTATGCGGCAGTTTGTACCCGGAAGGAGAA
CTACATCGGGAGAAGATGATAGTACTAATGCTAGCGCTAGTATCCCCGAG
GGAAACGGGGAAGGGGAAGCGAAGAGGTCGATGCATCATGGTGCAGGTAG
GGACAGTAGGGCAAGGTGCTGCACGTATTCGTTTCAGCTGAATGCTCGCG
GCAAAGGGCCAGCAGGGAGGGCACGAGGGACGTCAGACACAGACAGTACA
CAATTTAACGCGAGCAGTAAAACGACAGCGGGTCACCAACACAGCCTATC
GAGGGACAAACGCCTCCTGACCGATAAGCTGAAGCGAGCCCTTCGGCCGG
ACTCGTCGCTGTTCAAGACAAGCACTGCCCGGAACAAAAAATCGGGTTCT
CGCATGCCCGTTAGCCGCCCAGTCGACCCCACCGACCCCTTGCGATTTTT
GAGTACCAGCCAGCGACAGCGATTGAAGTTGGGACAACAATTGTCCCCGA
GCTCAGAGTTGAGGTCCGCGTCAAAGAACCCACCCCAACACCCACCACCA
CCATTGCCCGCGGCAACGAGTCCGTCACCAGGCACTAGCAACAACACTAG
TCGTAGCACCGCGATGCCAGCATCAAAATCGGGCGGTCCAGCGATACCGA
CACCGCTACCAAGCCCCGGAAAGATGCCAGGGCCTGAACATATACAGTGT
GCTGCTCTGAACGGAGCACGAGGGAAACTATCTATGACAGAGACGGACCG
TATTTCGGCGACGGGGGCGACAGCAGAGGGACTGTCGGCGATCATAGGGG
GGAGCGAGGGAGGAGTTACAGAGGCCGCAGTAGCGATCCCGGGAAAGAGC
AAGGGCATCCGTATGCGGCAGTTTGTACCCGGAAGGAGAACTACATCGGG
AGAAGATGATAGTACTAATGCTAGCGCTAGTATCCCCGAGGGAAACGGGG
AAGGGGAAGCGAAGAGGTCGATGCATCATGGTGCAGGTAGGGACAGTAGG back to top
|