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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 236 |
| Cds size | 222 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23446.6328.1 >prot_H-paniculata_contig23446.6328.1 ID=prot_H-paniculata_contig23446.6328.1|Name=mRNA_H-paniculata_contig23446.6328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MGQTLAIEEHAVFKMAWVLFHEATPDIALHGFKVLTTVEREELGKSSSKR
ASTGSKRRPGLAHVLLGVCGRRG* back to topmRNA from alignment at H-paniculata_contig23446:607..3977- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig23446.6328.1 ID=mRNA_H-paniculata_contig23446.6328.1|Name=mRNA_H-paniculata_contig23446.6328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3371bp|location=Sequence derived from alignment at H-paniculata_contig23446:607..3977- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCTCCCGTGCAAGATGGGACAGACCCTCGCCATAGAGGAACACGCCGTC
TTCAAGATGGCGTGGGTCCTCTTCCACGAGGCCACGCCAGACATCGCCCT
GCACGGCTTCAAAGGTAAGACTGTCAATTAACGGCGGCAACTAAGGGACT
GCGGAATATGCAAGTTTTTTCCGGCCCTGCGATGGGTCAGTGCGAAACGA
CGCGCCGAGCACATGTGATTTTCAAGTTCGATTGTAAAAATTAGCCAGTA
AAATTTCAGGGTCCAACGTGATGGAAACCCATCAAATCACGCAAAGCTCG
TAACCAGAAAGGCGTGGGCCTGGACTGCACGAACCTGCAAACTAATGTAG
CAATGTCGGTAACGAAAACGAGAGCGTCACTGCCGTCGCTACAACAACGC
TTCGCTCGATGTGTAGCTTTTCGCCACCCGAGCATAATGTCATCGGTTCT
GGCTAAATGAGCCCCACAATGAAGAAGAGGCTTTTGCAGTGCGGGGAACA
CCGATATGTCGATATCGTGCGTTCTCGACGTTATAAGAATTGCTGTAGGT
CGTGAAAGGCAGTGGGCGCGCGCTGGGTTCCCATGTAGCTCTTGCTGTGG
TTCATGCGTCGTGCAACTTGGCTGGGTCCAGCGACTGTTTAATAGAGTGA
AGAGTCCCAATTATTGCCGCCACGTTTCTGTCATACTCTGTGTCGTCAAT
ATTCAGCATTGGAATCGGAGGGAAAAAGAATCCATTCTACATGCGATTTG
ATTTTGCGGTTTGTCGTCCATGTATGTCTTCAGCGTATGTATGTAAACGC
AACATTTGTTGTCTTGTTCCACCGGGGGGAGGGTGAGGGGGCGGGATGAC
GAAGTTTCTCATCCACTTTTATCGTCCAAAATATGGTGGGTGATCAACCT
TCGCCCGCGTGTCGTATGATGTGTAATTCGGCTCAGGGAGGGAGGGAGGG
AGGGTTAGCGTCGAAGATGAGTCAATATCGACACGATAGCAGCTCAAGTA
GATGTTCGGAATAATACTTGCGAATCATTTGTGGAAGTGCCGCCCCCTTC
CTCACGGGTCGGACAAAATCTTCAGCCTACCCACACGTAGCCGTTGCTGA
TGTGCAGTACGAACATAGGTGTCGTACGCAATGACATGACATGCCTACAT
TTGTCGCCCATGCTAGCAGCCCTAATGCGCACAATCATCGGCTGCACAGG
CGTAGTGCTCGTTGCAGTCGTTCTTAAACACACGTCGACTTTTCGCGAGG
CCTTTGACATTGGTGGTGGTGGTGGTGGTGGTAAGAGTGGTTATGATGAT
CCGTGATGGTGATGATCCGTGATGGTGATGATCTGTGATGGTGATGATCC
GTGATGAGGATGACGCGCAGACGAACTGCGCACATGCCTTCGACGAAGCC
CGTGTCGCAGTGCCCGCGGCAGCTGCTCCCGAACGAGGAGTGGGAGAGGG
AGGTTTCACAAACCTTTGTCGAACTTCGTCAGGCACGTGTACTACTCAAA
GTGTACTTTGTAAGCGCGATAGCAAGGCGATACGTGGGAGTGTTCTTCGT
CATGATGTCAGTGATGTATTCAATTCTACGATTTTATCGACCTCATCAAC
TGTGTGACTTCCACGAACTAGTTGTAGCAAGCTGCCCTGGCGAGGTGTTT
CTATTTGTTAAGTGGCGGGAAAAGGTCGGGTAGTTGACCCGTGAAACACG
TTAACCATATATGCTTTTTCAGGCTTGGAGGGTAAGGGTTGAAGGTTGAT
TTTAGAATGCTGCCCACGGAAGAAGATTAACGAATCACATGGTACCAAGG
AAGTCAAGAAATTGCTATGTGTGTGTTTGAAGCGGTTACGCCATGAAAAA
CTCTGTACGACCCTCGTCGTGATCGTCGATTGGAAATGGAGTTTTCAAGT
CTGCACTCGATTTTCGAGTAATTGATGAAGACATGACCTCCGTGCGAGCA
TAGCGAACCACTCTCCGTGGTTTGTTGAAAGAAATTCTTCATTGATCAAG
AATCTCCCCCTAAATATGTATATTTCAATACATGATATCTTATCACACAG
TTGAGTCAAATCCCGTAGGACATGGAAACATATCTTCAATTTTCTGGATC
AATTTCGCTCATGTGTGTATTTCGAATCTGTGTACATACATATTATTTGT
GTGTGTTGGGGTGGGGGGGAGAGGTGAATGAACAGCAAAGAACTTTTAGG
ATCGAGTCCCCAAGAAAAGTTGTTTAGCCTATTTTTGAGTTTTGTTTTTC
TTTTTTGCCCCTCTTTGTTTTTTCCATGCTCCGGTTCGATAGTGAAACAT
TTCATGATCAATCGTGCGCTCGGGACAAAGCACGATTTTCGCACGGGTTA
GGGTACCCGTGGCTCTTTTATCAATATGAGTGTAGGAAAAGGTGAGACCA
TGCATCCTCATGTTGAATCAAGTGATTGGTCACCTACACACTGAAGGGTA
GATTATTCGTTTCCTTCGTATAAGCAACTTACTGCTTGGAGTTCCACTCC
CGCCCGGGCTGGTCCCTCCCCTCCCTATCCACCACTCGAGCCTCCCTGTC
TCGTTGCCTCGCTTACTTTTTCCGTGTGCTTGACTGTTTGGTGTTTTTTC
TATGTCTCCCTCTTTCTCTTTCTCTCTCTCTCCCTCTGGCATATCTGAAA
ACAGTACTTACGACGGTGGAAAGGGAGGAACTTGGGAAATCCAGGTGAGG
GAAAAAACAGACCAGTACTTATGGTACAGTACAGAATACCGAAATTTGTC
ATACTCCAAGGCCTGTCGTGTGGGACCCGGCGGATGGTCGCTTTCGACGC
ACATTTTTACGGAAAGGGAGATAGAGAAACGAAGACCGATCCCTTAATCG
ATCCTGCACCGTGTTGGAAATAGCTAGGATGTAGAAGGTGATGTTTTCAA
TGCCGCCACTTGCCTGTTTTACAAAGTAACAAGTGCCTGCCATATGTAGT
TTATCAAAAACATATATATATTTCTTTCTTTCCCCCCACCGCGGGTGATC
TATGGTACTCCCATGTAAGAAGAGGTAGAATAAATGTGCGCGAAGTGTCA
ATGGTTTGGATAATGGCATTAAGGCTGAAGTCAACAATGCTGAGAAGTTA
GCTTGCAACGCTCCATGAGCCAGACGTTGATTTTTGTGGCGTTTTTCACG
TTTTGTTATATATCTATATTCCATGTGAAGGAAGTACTACGGTACTGCAC
ACGTCATGATATACTCGCAACCATTCGTCGGAGTCTGCGCCCTCTCTTTT
TCTTCTTGTCCTGACCGCGCAATGCCGTCCTCGCAACAGCTCAAAGAGAG
CTTCTACCGGCTCTAAAAGGCGACCCGGGCTGGCACATGTTCTGCTTGGG
GTGTGTGGAAGGAGAGGATAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig23446:607..3977- >mRNA_H-paniculata_contig23446.6328.1 ID=mRNA_H-paniculata_contig23446.6328.1|Name=mRNA_H-paniculata_contig23446.6328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig23446:607..3977- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACAGACCCTCGCCATAGAGGAACACGCCGTCTTCAAGATGGCGTG
GGTCCTCTTCCACGAGGCCACGCCAGACATCGCCCTGCACGGCTTCAAAG
ATGGGACAGACCCTCGCCATAGAGGAACACGCCGTCTTCAAGATGGCGTG
GGTCCTCTTCCACGAGGCCACGCCAGACATCGCCCTGCACGGCTTCAAAG
TACTTACGACGGTGGAAAGGGAGGAACTTGGGAAATCCAGTACTTACGAC
GGTGGAAAGGGAGGAACTTGGGAAATCCAGCTCAAAGAGAGCTTCTACCG
GCTCTAAAAGGCGACCCGGGCTGGCACATGTTCTGCTTGGGGTGTGTGGA
AGGAGAGGATAACTCAAAGAGAGCTTCTACCGGCTCTAAAAGGCGACCCG
GGCTGGCACATGTTCTGCTTGGGGTGTGTGGAAGGAGAGGATAA back to top
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