prot_H-paniculata_contig234.6315.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig234.6315.1
Unique Nameprot_H-paniculata_contig234.6315.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
BLAST of mRNA_H-paniculata_contig234.6315.1 vs. uniprot
Match: D8LCR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR0_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.300e-69
Identity = 143/230 (62.17%), Postives = 178/230 (77.39%), Query Frame = 0
Query:    1 VRAFVETQTGDIQAMYPALERLLAARGREEREAAEKGPASSVLRSELPVLVRTTLRDVEKEKKEGGCG---GASASRVTASQVHAAMSSARESTLRTVNAQLARARGVQQEEMQSQDKRLRGDMEDTIGRIRGRVDGLGKTLESAKVELVSLVNKKAYKADVALSLQHKADARELDNINALVRTKVDEAEYREAYARTVHQLANLSAELSGERSELRANAERLSTRLLTK 227
            VRAFVE QTGD+QAM PALERLL AR REEREAAE+ PAS V R ELP LVR  LR + ++ ++GG G   G S S ++ASQV AA+S+ RESTLRTV AQLARARG QQEE+ SQ KRLR ++++++ R+R R +GLGK L+ AK ELVSL+N KAYKADV+L LQ KAD+++L ++ ALV+TKVD +++RE  ARTVH L  LS E+ G R ELR + ERLS+RLL K
Sbjct:  234 VRAFVEKQTGDVQAMSPALERLLTARAREEREAAERSPASPVTRGELPGLVRACLRGL-RDGRDGGGGEDDGFSPSGISASQVQAAVSAGRESTLRTVEAQLARARGAQQEELLSQVKRLRLELDESVSRVRARAEGLGKGLDQAKEELVSLLNAKAYKADVSLLLQGKADSKDLHSLAALVQTKVDGSDHRETSARTVHSLTALSGEVCGLRGELRLDVERLSSRLLAK 462          
BLAST of mRNA_H-paniculata_contig234.6315.1 vs. uniprot
Match: A0A6H5KUP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP0_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.070e-51
Identity = 122/231 (52.81%), Postives = 153/231 (66.23%), Query Frame = 0
Query:    1 VRAFVETQTGDIQAMYPALERLLAARGREEREAAEKGPASSVLRSELPVLVRTTLRDVEKEKKEGGCGGAS----ASRVTASQVHAAMSSARESTLRTVNAQLARARGVQQEEMQSQDKRLRGDMEDTIGRIRGRVDGLGKTLESAKVELVSLVNKKAYKADVALSLQHKADARELDNINALVRTKVDEAEYREAYARTVHQLANLSAELSGERSELRANAERLSTRLLTK 227
            VRAFVE QTGDIQAM PALERLLAAR REEREA E+ PAS V R ELP LVR  LR +     +GG GG       S ++ASQV AA+S+ RE                         KRLR ++++++GR+R R +G+GK L+ AK ELVSL+N KAYKADV+L LQ KAD+ +L  + ALV+TKV+E+++RE+ ART H L  LS E+ G R ELR + ERLS+RLL K
Sbjct:  243 VRAFVEKQTGDIQAMSPALERLLAARAREEREAVERSPASPVTRGELPGLVRACLRGLRDG--DGGGGGEDDGLFPSGISASQVQAAVSAGREV------------------------KRLRLELDESVGRVRARAEGIGKGLDQAKEELVSLLNAKAYKADVSLLLQGKADSGDLSRLAALVQTKVNESDHRESAARTAHSLTALSGEVCGLRGELRLDVERLSSRLLAK 447          
BLAST of mRNA_H-paniculata_contig234.6315.1 vs. uniprot
Match: A0A835YJ30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ30_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.910e-8
Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 0
Query:  117 LRGDMEDTIGRIRGRVDGLGKTLESAKVELVSLVNKKAYKADVALSL------------------------QHKADARELDNINALVRTKVDEAEYREAYARTVHQLANLSAELSGERSELRANAERLSTRLLTK 227
            LR ++ D++ R  G  DGL ++LE+AK ELV ++NKKAY++DVA                           + KAD   L+ + A    +V  AE  E  +R    +  LSA++SG R +LR+  ERL  RL  K
Sbjct:  359 LRAEVCDSLARWEGCTDGLRRSLEAAKAELVEVLNKKAYRSDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKADVAALERVAADAAARVGAAELAELSSRVRASMTQLSADVSGARVDLRSEMERLGQRLRRK 493          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig234.6315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCR0_ECTSI1.300e-6962.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUP0_9PHAE1.070e-5152.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJ30_9STRA1.910e-834.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig234contigH-paniculata_contig234:17775..27287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig234.6315.1mRNA_H-paniculata_contig234.6315.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig234 17775..27289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig234.6315.1 ID=prot_H-paniculata_contig234.6315.1|Name=mRNA_H-paniculata_contig234.6315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
VRAFVETQTGDIQAMYPALERLLAARGREEREAAEKGPASSVLRSELPVL
VRTTLRDVEKEKKEGGCGGASASRVTASQVHAAMSSARESTLRTVNAQLA
RARGVQQEEMQSQDKRLRGDMEDTIGRIRGRVDGLGKTLESAKVELVSLV
NKKAYKADVALSLQHKADARELDNINALVRTKVDEAEYREAYARTVHQLA
NLSAELSGERSELRANAERLSTRLLTK
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