mRNA_H-paniculata_contig23398.6313.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig23398.6313.1
Unique NamemRNA_H-paniculata_contig23398.6313.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: D8LUB4_ECTSI (Fructose-2,6-bisphosphate 2-phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 5.920e-23
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKLLED-TH 150
            AVLRCLYAYFLDLPSEEIPYLSIPLHT IKLTPQAFGC+EKRFKLL+D TH
Sbjct:  346 AVLRCLYAYFLDLPSEEIPYLSIPLHTVIKLTPQAFGCNEKRFKLLDDDTH 396
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A6H5KPW9_9PHAE (6PF2K domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW9_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.150e-22
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKLLED-TH 150
            AVLRCLYAYFLDLPSEEIPYLSIPLHT IKLTPQAFGC+EKRFKLL+D TH
Sbjct:  472 AVLRCLYAYFLDLPSEEIPYLSIPLHTVIKLTPQAFGCNEKRFKLLDDDTH 522
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A835ZGS1_9STRA (Fructose-2,6-bisphosphate 2-phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS1_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.600e-22
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKLLEDTHGG 156
            AVLRCLYAYFLDLP+EE+PYLSIPLHT IKLTPQAFGCSEKRFKL+E+   G
Sbjct:  429 AVLRCLYAYFLDLPNEEVPYLSIPLHTVIKLTPQAFGCSEKRFKLMENQPDG 480
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A7S2XYM4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYM4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.240e-20
Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKLL 138
            AVLRCLYAYFLDLP+EEIP+LSIPLHT I+LTPQAFGCSEKR+KL+
Sbjct:  396 AVLRCLYAYFLDLPTEEIPFLSIPLHTVIRLTPQAFGCSEKRYKLM 441
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A4D9D6W8_9STRA (6PF2K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6W8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.050e-18
Identity = 35/46 (76.09%), Postives = 44/46 (95.65%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKLL 138
            AVLRCLYAYFLDLP EE+PYL+IPLHT IK+TP+A+GC+EKR+K++
Sbjct:  503 AVLRCLYAYFLDLPPEEVPYLAIPLHTVIKVTPKAYGCAEKRYKMM 548
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A427YLE3_9TREE (Fructose-2,6-bisphosphatase n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YLE3_9TREE)

HSP 1 Score: 76.6 bits (187), Expect = 4.990e-15
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKL---LEDTH 150
            A+LRCLYAYFL LP EE+PY+ IPLHT IK+TP A+GC E+R+ L     DTH
Sbjct:  491 AILRCLYAYFLSLPQEELPYIKIPLHTLIKITPMAYGCHEERYHLPIAAVDTH 543
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A0H2RDQ7_9AGAM (Bifunctional 6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2RDQ7_9AGAM)

HSP 1 Score: 75.9 bits (185), Expect = 9.230e-15
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKL---LEDTH 150
            A+LRCLYAYF DLP  ++PY+ IPLHT IKLTP+A+GC E+RF L     DTH
Sbjct:  429 AILRCLYAYFHDLPQADLPYIKIPLHTVIKLTPKAYGCDEERFALPIGAVDTH 481
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A137Q267_9AGAR (Fructose-2,6-bisphosphatase n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137Q267_9AGAR)

HSP 1 Score: 75.9 bits (185), Expect = 9.270e-15
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKL---LEDTH 150
            A+LRCLYAYF DLP E++PY+ IPLHT +KLTP+A+GC E+R+ L     DTH
Sbjct:  439 AILRCLYAYFHDLPQEDLPYVKIPLHTVLKLTPRAYGCDEERYTLPIGAVDTH 491
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A8J1VUR1_9TREE (Fructose-2,6-bisphosphatase n=1 Tax=Tremellales sp. Tagirdzhanova-0007 TaxID=2778382 RepID=A0A8J1VUR1_9TREE)

HSP 1 Score: 75.9 bits (185), Expect = 9.320e-15
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKL---LEDTH 150
            A+LRCLYAYFL LP EE+PY+ IPLHT IK+TP A+GC+E+R+ L     DTH
Sbjct:  535 AILRCLYAYFLALPQEELPYIKIPLHTLIKITPLAYGCNEERYPLPIAAVDTH 587
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BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Match: A0A5C3QQA0_9AGAR (Fructose-2,6-bisphosphatase n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QQA0_9AGAR)

HSP 1 Score: 75.5 bits (184), Expect = 1.270e-14
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 1 
Query:    1 AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKL---LEDTH 150
            A++RCLYAYF DLP  ++PYL IPLHT IKLTP+A+GC E+R++L     DTH
Sbjct:  478 AIIRCLYAYFHDLPQADLPYLKIPLHTVIKLTPKAYGCDEERYQLPIAAVDTH 530
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23398.6313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUB4_ECTSI5.920e-2392.16Fructose-2,6-bisphosphate 2-phosphatase n=1 Tax=Ec... [more]
A0A6H5KPW9_9PHAE1.150e-2292.166PF2K domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZGS1_9STRA3.600e-2284.62Fructose-2,6-bisphosphate 2-phosphatase n=1 Tax=Tr... [more]
A0A7S2XYM4_9STRA7.240e-2086.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D6W8_9STRA7.050e-1876.096PF2K domain-containing protein n=2 Tax=Monodopsid... [more]
A0A427YLE3_9TREE4.990e-1564.15Fructose-2,6-bisphosphatase n=1 Tax=Saitozyma podz... [more]
A0A0H2RDQ7_9AGAM9.230e-1564.15Bifunctional 6-phosphofructo-2-kinase/fructose-2,6... [more]
A0A137Q267_9AGAR9.270e-1562.26Fructose-2,6-bisphosphatase n=1 Tax=Leucoagaricus ... [more]
A0A8J1VUR1_9TREE9.320e-1564.15Fructose-2,6-bisphosphatase n=1 Tax=Tremellales sp... [more]
A0A5C3QQA0_9AGAR1.270e-1462.26Fructose-2,6-bisphosphatase n=1 Tax=Pterula gracil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23398contigH-paniculata_contig23398:152..310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue9.3e-19
Seed eggNOG ortholog2880.D8LUB4
Preferred namePFKFB3
KEGG rclassRC00152
KEGG koko:K01103,ko:K19028,ko:K19029,ko:K19030
KEGG ReactionR02731
KEGG Pathwayko00051,ko04066,ko04152,ko04919,ko04922,map00051,map04066,map04152,map04919,map04922
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000166,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0003873,GO:0004331,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006000,GO:0006003,GO:0006006,GO:0006007,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009605,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010562,GO:0010563,GO:0010646,GO:0010647,GO:0010675,GO:0010676,GO:0010677,GO:0010817,GO:0010906,GO:0014070,GO:0014074,GO:0016051,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019203,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023056,GO:0030554,GO:0030808,GO:0030809,GO:0030810,GO:0030811,GO:0030812,GO:0030813,GO:0031099,GO:0031100,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031667,GO:0031960,GO:0031974,GO:0031981,GO:0032024,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032868,GO:0032879,GO:0032880,GO:0032991,GO:0033131,GO:0033133,GO:0033674,GO:0033762,GO:0033993,GO:0034284,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0042594,GO:0042802,GO:0042866,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0043436,GO:0043467,GO:0043470,GO:0043540,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045820,GO:0045821,GO:0045912,GO:0045913,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045980,GO:0045981,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046683,GO:0046700,GO:0046835,GO:0046883,GO:0046887,GO:0046939,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048731,GO:0048856,GO:0050308,GO:0050708,GO:0050714,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051194,GO:0051195,GO:0051196,GO:0051197,GO:0051198,GO:0051222,GO:0051223,GO:0051338,GO:0051347,GO:0051384,GO:0051591,GO:0055086,GO:0060322,GO:0061695,GO:0062012,GO:0062013,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070095,GO:0070201,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0090407,GO:0097159,GO:0097367,GO:1900371,GO:1900372,GO:1900373,GO:1900542,GO:1900543,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1903299,GO:1903301,GO:1903530,GO:1903532,GO:1903578,GO:1903579,GO:1903580,GO:1904951,GO:1990234,GO:2001169,GO:2001170,GO:2001171
EggNOG free text desc.6phosphofructo2kinase
EggNOG OGsCOG0406@1,KOG0234@2759
EC2.7.1.105,3.1.3.46
COG Functional cat.G
BiGG ReactioniMM904.YJL155C,iND750.YJL155C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size159
Cds size159
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929663.3163111-CDS-H-paniculata_contig23398:151..3101622929663.3163111-CDS-H-paniculata_contig23398:151..310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23398 152..310 +
1691480956.9742968-CDS-H-paniculata_contig23398:151..3101691480956.9742968-CDS-H-paniculata_contig23398:151..310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23398 152..310 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23398.6313.1prot_H-paniculata_contig23398.6313.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig23398 152..310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig23398.6313.1

>prot_H-paniculata_contig23398.6313.1 ID=prot_H-paniculata_contig23398.6313.1|Name=mRNA_H-paniculata_contig23398.6313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
AVLRCLYAYFLDLPSEEIPYLSIPLHTAIKLTPQAFGCSEKRFKLLEDTH
GG*
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mRNA from alignment at H-paniculata_contig23398:152..310+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig23398.6313.1 ID=mRNA_H-paniculata_contig23398.6313.1|Name=mRNA_H-paniculata_contig23398.6313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=159bp|location=Sequence derived from alignment at H-paniculata_contig23398:152..310+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGTTCTGCGATGCTTGTACGCCTACTTCTTGGATCTTCCGTCGGAAGA
AATCCCTTACCTGAGCATTCCCCTGCACACTGCCATAAAGCTCACGCCGC
AGGCATTCGGTTGTAGCGAGAAGCGTTTCAAGCTTCTCGAGGATACGCAC
GGCGGATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig23398:152..310+

>mRNA_H-paniculata_contig23398.6313.1 ID=mRNA_H-paniculata_contig23398.6313.1|Name=mRNA_H-paniculata_contig23398.6313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=318bp|location=Sequence derived from alignment at H-paniculata_contig23398:152..310+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGTTCTGCGATGCTTGTACGCCTACTTCTTGGATCTTCCGTCGGAAGA
AATCCCTTACCTGAGCATTCCCCTGCACACTGCCATAAAGCTCACGCCGC
AGGCATTCGGTTGTAGCGAGAAGCGTTTCAAGCTTCTCGAGGATACGCAC
GGCGGATGAGCGGTTCTGCGATGCTTGTACGCCTACTTCTTGGATCTTCC
GTCGGAAGAAATCCCTTACCTGAGCATTCCCCTGCACACTGCCATAAAGC
TCACGCCGCAGGCATTCGGTTGTAGCGAGAAGCGTTTCAAGCTTCTCGAG
GATACGCACGGCGGATGA
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