mRNA_H-paniculata_contig23396.6312.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A6H5KTH4_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH4_9PHAE) HSP 1 Score: 146 bits (368), Expect = 4.320e-41 Identity = 79/104 (75.96%), Postives = 93/104 (89.42%), Query Frame = 1
Query: 1 QASSMAEISKKMKGS-KLRNFPQG-RLVDQVVLVGGATRMP--SKLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMAMSGLMQ 300
Q SSMAE++++M GS KLR FPQG R+VD+VVLVGGATRMP +LV GITGV PKRTV+PD+AVALGAAAFAGILEGEVEGQEV+T+WQASVYRMMA +G+M+
Sbjct: 208 QVSSMAEVARRMDGSAKLRRFPQGGRMVDKVVLVGGATRMPCVQRLVGGITGVKPKRTVDPDRAVALGAAAFAGILEGEVEGQEVMTSWQASVYRMMARNGMME 311
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: D7G3X0_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X0_ECTSI) HSP 1 Score: 142 bits (358), Expect = 2.230e-37 Identity = 77/101 (76.24%), Postives = 90/101 (89.11%), Query Frame = 1
Query: 10 SMAEISKKMKGS-KLRNFPQG-RLVDQVVLVGGATRMP--SKLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMAMSGLMQ 300
SMAE+++ M GS KLR FPQG R+VD+VVLVGGATRMP +LV GITGV PKRTV+PD+AVALGAAAFAGILEGEVEGQEV+T+WQASVYRMMA +G+M+
Sbjct: 619 SMAEVARSMDGSAKLRRFPQGGRMVDKVVLVGGATRMPCVQRLVGGITGVKPKRTVDPDRAVALGAAAFAGILEGEVEGQEVMTSWQASVYRMMARNGMME 719
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A835Z756_9STRA (Hsp70 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z756_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.710e-23 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 1 QASSMAEISKKMK-GSKLRNFPQGRLVDQVVLVGGATRM--PSKLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMAMSG 291
QA + + + M G+KL FPQGR +DQVVLVGG TRM +LV +TGV TVNPD+AVALGAA +AGI++ EV+G EV+TAWQA + R MA +G
Sbjct: 384 QADAFGRLQRTMTTGNKLHVFPQGRPLDQVVLVGGGTRMLCVQQLVQAVTGVKVAMTVNPDEAVALGAAVYAGIMDNEVQGIEVMTAWQARILREMARTG 483
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A7S0STT4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STT4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.960e-22 Identity = 43/91 (47.25%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 13 MAEISKKMKGSKLRNFPQGRLVDQVVLVGGATRMPS--KLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMM 279
+ + ++ + S L FP G+ +D+V+L+GG+TR+P+ +LV +TG+ PK TVNPD+AV+LGAA AGIL+GE+ +V++AWQA++YR +
Sbjct: 37 LKRLQRETRLSSLSLFPSGQTLDEVILIGGSTRIPAIKRLVKVMTGIDPKMTVNPDEAVSLGAAVLAGILDGEITDMQVMSAWQAAMYRTL 127
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A4D9CZP8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZP8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.370e-21 Identity = 47/86 (54.65%), Postives = 66/86 (76.74%), Query Frame = 1
Query: 22 ISKKMKGSKLRNFPQGRLVDQVVLVGGATRMPS--KLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYR 273
+ K+ G K+R FPQGR + +VV+VGGATRMPS +LVA +TG+TP+ TV+PD+AVALGA AG+L+G +E ++LT QA++ R
Sbjct: 852 VRKRNPGLKIREFPQGRSIQEVVMVGGATRMPSIRRLVAAVTGITPRTTVDPDEAVALGAGIHAGVLDGIIEDMDMLTPMQAAIAR 937
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A7S1DWZ4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DWZ4_HEMAN) HSP 1 Score: 87.8 bits (216), Expect = 7.480e-20 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 13 MAEISKKMKG-SKLRNFPQGRLVDQVVLVGGATRMPS--KLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMAMSGL 294
M ++ K++K KLR FP G + +VV VGGATRMP+ K V GITGV P++T++P+ AVALGAA AG+++G+++G EVL+ QA++ R A L
Sbjct: 28 MHKVQKQVKHLGKLREFPPGASLTEVVFVGGATRMPAVVKTVRGITGVEPRKTIDPEAAVALGAAVQAGVMDGDIQGLEVLSPLQAALLRGFARKRL 124
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A7S2W2M1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2M1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.970e-19 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 28 KKMKGS-KLRNFPQGRLVDQVVLVGGATRMP--SKLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMAM 285
K+ KG+ KLR FP GR + +VVLVGGATRMP +LV + G+ P+RTV+PD AVALGAA AGI++GEVEG EV + +QA+ R +A+
Sbjct: 230 KRGKGAVKLRQFPTGRALSEVVLVGGATRMPVVQQLVRILFGIEPRRTVDPDLAVALGAAIQAGIMDGEVEGLEVFSPFQAAFLRYLAI 318
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: L1J612_GUITC (Hsp70, chloroplastic n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J612_GUITC) HSP 1 Score: 85.9 bits (211), Expect = 1.960e-17 Identity = 43/96 (44.79%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 1 QASSMAEISKKMKGSKLRNFPQGRLVDQVVLVGGATRMPS--KLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMA 282
Q + + ++ K++ G +LR FP GR + +V+LVGG T+MPS L+ +TG+T K+T++PD+AV+LGAA AG+++G ++G EVL+ QA++ R A
Sbjct: 437 QKAEVQKVQKRVGGIRLRKFPAGRRLSEVILVGGGTKMPSVTNLIRTMTGLTAKKTIDPDEAVSLGAAIQAGMMDGLIQGFEVLSPLQAALLRGFA 532
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A7S3P0Y7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0Y7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.560e-16 Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 1
Query: 40 GSKLRNFPQGRLVDQVVLVGGATRMPS--KLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQ-EVLTAWQASVYRMMA 282
G K+++ GR + +VVLVGGATRMP+ +L+ +TGVTP++TVNPD+AVALG AA GIL+G V+G ++L+ QA++ R MA
Sbjct: 75 GVKVQDGITGRPISRVVLVGGATRMPAVGRLIGALTGVTPQKTVNPDEAVALGCAANVGILDG-VDGMGKILSPMQAAILRAMA 157
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Match: A0A7S2PXA7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXA7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.770e-16 Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 1 QASSMAEISKKMKGSKLRNFPQGRLVDQVVLVGGATRMP--SKLVAGITGVTPKRTVNPDQAVALGAAAFAGILEGEVEGQEVLTAWQASVYRMMA 282
QA S+ E +K K++ GR++ ++VLVGGATRMP KL+ + G TP+RTVNPD+AVALG A AGIL+GE +GQ VL+ A+V R +A
Sbjct: 579 QALSLTEGTK-----KVQEGIHGRVLSRIVLVGGATRMPVIGKLLEAVVGQTPQRTVNPDEAVALGCAVQAGILDGEDQGQTVLSPMAAAVMRALA 669 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23396.6312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23396.6312.1 >prot_H-paniculata_contig23396.6312.1 ID=prot_H-paniculata_contig23396.6312.1|Name=mRNA_H-paniculata_contig23396.6312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp MAEISKKMKGSKLRNFPQGRLVDQVVLVGGATRMPSKLVAGITGVTPKRTback to top mRNA from alignment at H-paniculata_contig23396:431..2047+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23396.6312.1 ID=mRNA_H-paniculata_contig23396.6312.1|Name=mRNA_H-paniculata_contig23396.6312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1617bp|location=Sequence derived from alignment at H-paniculata_contig23396:431..2047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23396:431..2047+ >mRNA_H-paniculata_contig23396.6312.1 ID=mRNA_H-paniculata_contig23396.6312.1|Name=mRNA_H-paniculata_contig23396.6312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at H-paniculata_contig23396:431..2047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |