mRNA_H-paniculata_contig23394.6311.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A6A3BY51_HIBSY (Histone acetyltransferase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BY51_HIBSY) HSP 1 Score: 149 bits (377), Expect = 2.580e-38 Identity = 89/186 (47.85%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPMD-KSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMITN--MGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHG 549
GK +Q E R R PLE+VHTDI GP D S GG R+ F+DD+SR +Y L+ KSEAL L++F+ K +G ++ LR +GGEYT K F +FC E+GI + +A YTP QNGVAER R +I +MAR+ MI + R +WAEAVR AVY LNR PT+ TP E W G
Sbjct: 370 GKQHRQSFEVGRSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNR------TILDMARS-MIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSG 548
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A6V7NQR9_ANACO (Integrase catalytic domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7NQR9_ANACO) HSP 1 Score: 144 bits (362), Expect = 3.600e-38 Identity = 78/176 (44.32%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 43 RTIEPLELVHTDIVGPM-DKSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMI-TNMGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGPSSKV 564
R PLEL+H DI GP SF R+ +FVDDY+RM+ +Y L KSEA QF+ + K +G +++ LR +GGE+T F +C ENGIK++ + +TP QNGVAER R +I EMAR+ M + +WAEAV + V+ LNR+PT+ TPYE WHG +V
Sbjct: 198 RAKAPLELIHADICGPTRTPSFNQKRYFLLFVDDYTRMMWIYFLEQKSEAFSIFIQFKAYVEKQSGHQIKILRTDRGGEFTSHSFNNYCKENGIKRQLTVRHTPQQNGVAERKNR------TIVEMARSMMKGKGLPNQFWAEAVNTTVFILNRSPTKAVQNKTPYEAWHGQKPQV 367
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY) HSP 1 Score: 148 bits (373), Expect = 8.830e-38 Identity = 88/186 (47.31%), Postives = 112/186 (60.22%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPMD-KSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMITN--MGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHG 549
GK +Q E R R PLE+VHTDI GP D S GG R+ F+DD+SR +Y L+ KSEAL L++F+ K +G ++ LR +GGEYT K F +FC E+GI + + YTP QNGVAER R +I +MAR+ MI + R +WAEAVR AVY LNR PT+ TP E W G
Sbjct: 1292 GKQHRQSFEVGRSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNR------TILDMARS-MIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSG 1470
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A8J5GP83_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GP83_ZINOF) HSP 1 Score: 147 bits (372), Expect = 1.080e-37 Identity = 83/185 (44.86%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPMDKSFGGC-RFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMITNMG--R*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWH 546
GK K P K + PLELVH+DI GPM G R+ +F+DDY+RM+ +Y L KSEA QF+ + +G ++ LR +GGEY PF ++C NGIK++ + +YTP QNGVAER R +I EMAR NM+ G YWAEAV +A Y +NR+PT+ + TPYE WH
Sbjct: 490 GKMHKLPFPKTSWQAK-SPLELVHSDICGPMQTPTPGRKRYFILFIDDYTRMMWIYFLNQKSEAFSTFMQFKAQAERESGFLIKSLRTDRGGEYLSNPFSEYCKANGIKRQLTTSYTPQQNGVAERKNR------TIVEMAR-NMLKYKGIPNLYWAEAVHTAAYIMNRSPTKAVHNMTPYEAWH 666
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A8J5F3N7_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F3N7_ZINOF) HSP 1 Score: 146 bits (369), Expect = 2.950e-37 Identity = 82/187 (43.85%), Postives = 111/187 (59.36%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPMDKSFGGC-RFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANM----ITNMGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWH 546
GK K P K + PLELVH+DI GPM G R+ +F+DDY+RM+ +Y L KSEA QF+ + +G ++ LR +GGEY PF ++C NGIK++ + +YTP QNGVAER R +I EMAR+ + I N+ YWAEAV +A Y +NR+PT+ + TPYE WH
Sbjct: 460 GKMHKLPFPKTSWQAK-SPLELVHSDICGPMQTPTPGRKRYFILFIDDYTRMMWIYFLNQKSEAFSTFMQFKAQAERESGFLIKSLRTDRGGEYLSNPFSEYCKANGIKRQLTTSYTPQQNGVAERKNR------TIVEMARSMLKYKGIPNL---YWAEAVHTAAYIMNRSPTKAVHNMTPYEAWH 636
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A4Y1RBJ0_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RBJ0_PRUDU) HSP 1 Score: 137 bits (346), Expect = 3.490e-37 Identity = 75/177 (42.37%), Postives = 111/177 (62.71%), Query Frame = 1
Query: 25 EKYRGERTIEPLELVHTDIVGPMDK-SFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMITN-MGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHG 549
+K R R PLEL+H+DI GPM + GG R+ F+DD++RM V+ L+ KS+A K+F+ + +G ++++LR +GGEYT F +FC E G++++ + AY+P QNGVAER R ++ EMARA M + +WAEAV +AVY NR+PT + TP+EK+ G
Sbjct: 29 DKERAWRASHPLELIHSDICGPMQTITLGGNRYFLTFIDDHTRMCWVFFLQHKSQAFNIFKRFKSMVELQSGYQIKKLRSDRGGEYTSLDFSKFCEEVGLERQLTVAYSPQQNGVAERKNR------TVMEMARAMMHEKKIPLKFWAEAVNTAVYLQNRSPTSALDNSTPFEKFSG 199
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 146 bits (368), Expect = 3.980e-37 Identity = 88/186 (47.31%), Postives = 112/186 (60.22%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPMD-KSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMITN--MGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHG 549
GK +Q + R R LE+VHTDI GP D S GG R+ F+DD+SR +Y L+ KSEAL LK+F+ K +G ++ LR +GGEYT K F +FC E+GI + +A YTP QNGVAER R +I +MAR+ MI + R +WAEAVR AVY LNR PT+ TP E W G
Sbjct: 371 GKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNR------TILDMARS-MIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSG 549
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A251SFG3_HELAN (Putative ribonuclease H-like domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SFG3_HELAN) HSP 1 Score: 145 bits (366), Expect = 7.610e-37 Identity = 81/191 (42.41%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPM-DKSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANM-ITNMGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGPSSKVE 567
GK +++P K + EPL+LVH+DI GPM +S GGCR+ F+DDY+R VY L+ KSEAL+ K F K + ++ LR +GGEY K F+++ NGI+ + + +YTP QNGVAER R ++ E++R+ M I + YWAEAV Y LNR T+ TPYE W+G VE
Sbjct: 732 GKHARKPFHKKMVWQATEPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKTWVYFLKFKSEALYHFKNFRVLNEKQSNHVIKTLRTDRGGEYCSKAFQEYLRLNGIRHQLTNSYTPQQNGVAERKNR------TLMELSRSMMNIKQLPNCYWAEAVACTTYILNRTITKTRPNITPYEAWNGQKPNVE 916
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 144 bits (364), Expect = 1.380e-36 Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 1
Query: 1 GKASKQPVEKYRGERTIEPLELVHTDIVGPMDK-SFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANMITN-MGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGPSSKVE 567
GK K P K R E L+LVHTD+ GPM S G ++ +F+DDY+RM V+ L+ KS+ +F+ + GL+V+RLR G EYT F++FC + GI+ + + YTP QNGV+ER R ++ EMAR + + + +WAEAV ++VY LN PT+ G TP+E WHG + VE
Sbjct: 436 GKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNR------TVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVE 620
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Match: A0A4Y1RU53_PRUDU (Cyclic nucleotide gated channel 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RU53_PRUDU) HSP 1 Score: 143 bits (360), Expect = 3.250e-36 Identity = 80/177 (45.20%), Postives = 107/177 (60.45%), Query Frame = 1
Query: 43 RTIEPLELVHTDIVGPM-DKSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLRVRRLRLGQGGEYTGKPFRQFCAENGIKQEFSAAYTPLQNGVAERSWRXXXXXXSIFEMARANM-ITNMGR*YWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGPSSKVE 567
R PLELVH DI GP SF R+ +FVDD+SRM+ VY L KSEA KQF+ +G ++ LR +GGE+T F ++C NGIK+E +A YTP QNGVAER R +I EMAR+ + ++ +WAEA+ +AV+ LNR+PT+ TP+E WH KV+
Sbjct: 522 RAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNR------TIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVD 692 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23394.6311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23394.6311.1 >prot_H-paniculata_contig23394.6311.1 ID=prot_H-paniculata_contig23394.6311.1|Name=mRNA_H-paniculata_contig23394.6311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MDKSFGGCRFATIFVDDYSRMLKVYTLRLKSEALWALKQFERDIAKANGLback to top mRNA from alignment at H-paniculata_contig23394:657..1226- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23394.6311.1 ID=mRNA_H-paniculata_contig23394.6311.1|Name=mRNA_H-paniculata_contig23394.6311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=570bp|location=Sequence derived from alignment at H-paniculata_contig23394:657..1226- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23394:657..1226- >mRNA_H-paniculata_contig23394.6311.1 ID=mRNA_H-paniculata_contig23394.6311.1|Name=mRNA_H-paniculata_contig23394.6311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig23394:657..1226- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |