prot_H-paniculata_contig2338.6308.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2338.6308.1
Unique Nameprot_H-paniculata_contig2338.6308.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 2.620e-57
Identity = 97/125 (77.60%), Postives = 112/125 (89.60%), Query Frame = 0
Query:    1 MYQNGAQIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDV 125
            + +   QIV+DAK GVRD A LVIVSY+LA+RMV+ S LWKGQF++V+ADESHYLKSVDAKRSQA+VPLMQK++RA+CVTGTPALSRPAELFMQL ALMP+AF +FHPFAVRYC A QGPFGLDV
Sbjct:  184 LTKEAIQIVRDAKMGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRYCAAFQGPFGLDV 308          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A7S4KWJ5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KWJ5_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 5.950e-31
Identity = 53/84 (63.10%), Postives = 67/84 (79.76%), Query Frame = 0
Query:   43 QFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDVN 126
            Q+QVV+ADESH+LK+  AKR+Q+++PL+QK+ RA+ +TGTPALSRP ELF Q+ A+ P  FP F PFA RYCDA Q  FGLD N
Sbjct:    5 QYQVVIADESHFLKNPQAKRTQSVLPLLQKAKRAILLTGTPALSRPKELFTQIQAINPNLFPKFFPFASRYCDATQNRFGLDCN 88          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A7S3UX31_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX31_HETAK)

HSP 1 Score: 110 bits (275), Expect = 9.270e-28
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 0
Query:   19 DALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDVN 126
            +A + I+SY+L SRM    +L     QVV+ADE HYLKS  AKR+QAI+PL+Q + RA+ ++GTPALSRP ELF QL+AL P+A+ S   + +RYCD  +G FG D +
Sbjct:   70 NARIFIISYDLCSRMA--KELEDFNCQVVIADECHYLKSPTAKRTQAILPLLQLAKRAILLSGTPALSRPVELFTQLHALQPEAWASLQEYGLRYCDGKKGRFGWDFS 175          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A7R8XHD2_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XHD2_9CRUS)

HSP 1 Score: 115 bits (287), Expect = 2.620e-27
Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    7 QIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDVN 126
            Q++   K  +    L++I SY+L SR  D  +L   +FQVVV DESH LKS+ + R++  +P+++ + RA+ ++GTPALSRP ELF QLNA+ P+ FPS+  F VRYCD  +GPFG D +
Sbjct:  273 QVIHTGKEPLSTSLLVLITSYDLMSRRKD--ELRSRRFQVVVMDESHLLKSIKSGRTKVAMPILRAAKRAILLSGTPALSRPVELFNQLNAVDPRLFPSYQDFGVRYCDGKEGPFGWDFS 390          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A1Y1XQA7_9FUNG (Uncharacterized protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XQA7_9FUNG)

HSP 1 Score: 115 bits (287), Expect = 2.920e-27
Identity = 57/118 (48.31%), Postives = 83/118 (70.34%), Query Frame = 0
Query:    7 QIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLD 124
            Q++  AK  +R  + ++I SY+L SR   + ++ K +F VVVADESHYLK+ DAKR++ I P+++ S  A+ +TGTPALSRP EL+ QLN+L+P+A  +   F +RYCDA +  FG D
Sbjct:  328 QVIFSAKDVIRTTSKIIIASYDLISRKGMDEQIKKAKFNVVVADESHYLKNKDAKRTKIICPIIKNSKYALLLTGTPALSRPIELYTQLNSLIPRAISNPVKFGLRYCDAKETKFGWD 445          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A1Y1UYY1_9FUNG (Uncharacterized protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UYY1_9FUNG)

HSP 1 Score: 112 bits (280), Expect = 6.650e-27
Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 0
Query:    3 QNGAQIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDVN 126
            ++  Q++   K  +R  + +VI+SY++ SR     ++   +F VVVADESHYLK+ DAKR++ I P+++ S  A+ +TGTPALSRP EL+ QLN+L+P+A  +   F +RYCDA +  FG D N
Sbjct:   82 EDDIQVIFTTKDSLRKTSKIVILSYDIISRKGIEDQIKSIKFNVVVADESHYLKNKDAKRTKIICPIIKNSKYALLLTGTPALSRPIELYTQLNSLIPRAISNPIKFGLRYCDAKETKFGWDFN 205          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: L1IS15_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IS15_GUITC)

HSP 1 Score: 113 bits (282), Expect = 8.370e-27
Identity = 54/106 (50.94%), Postives = 78/106 (73.58%), Query Frame = 0
Query:   21 LLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDVN 126
            L+ I+SY+L  +     ++   QF+V++ DESHYLK+ +AKRS+ I+P ++ + R++ +TGTPALSRP ELF  LN+L P+ F +F  FA RYCDAHQGPFGL+ +
Sbjct:  168 LVTIISYDLFCKFAP--EISSMQFKVIIGDESHYLKNPNAKRSKTILPFIRSARRSILLTGTPALSRPVELFNLLNSLHPRLFNNFLEFAYRYCDAHQGPFGLETS 271          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A1Y2E997_9FUNG (Uncharacterized protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2E997_9FUNG)

HSP 1 Score: 112 bits (279), Expect = 2.730e-26
Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    7 QIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLD 124
            Q++  AK  +R  + +VI++Y+L SR     ++ K +F V+VADESHYLK+ DAKR++ I P ++ S  A+ +TGTPALSRP EL+ QLNAL+P+   S   F  RYCDA +  FG D
Sbjct:  182 QVIFTAKDIIRPSSQIVIINYDLVSRGNMIEQIQKAKFNVIVADESHYLKNKDAKRTKIICPFIKNSKYALLLTGTPALSRPIELYTQLNALIPRTISSPVQFGKRYCDAKETKFGWD 299          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A2V3IYF0_9FLOR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYF0_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 4.810e-26
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0
Query:   24 IVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLDVN 126
            IVSY+L  +M   S L + QF  ++ADESHYLKS  AKR+QA+VPL++ + RA+ ++GTPALSRP ELF Q+NAL P  FP +H +  +YC+AH G FG DV+
Sbjct:  450 IVSYDLVRKMSPRS-LRRCQF--IIADESHYLKSGTAKRTQAVVPLLKSARRAVLLSGTPALSRPVELFCQINALAPILFPDYHDYVQQYCNAHYGFFGYDVS 549          
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Match: A0A507EUN4_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EUN4_9FUNG)

HSP 1 Score: 111 bits (277), Expect = 6.240e-26
Identity = 57/118 (48.31%), Postives = 84/118 (71.19%), Query Frame = 0
Query:    7 QIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVADESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMPKAFPSFHPFAVRYCDAHQGPFGLD 124
            Q++  +K  V  +   VI SY+LASR     +L K ++Q+VVADESH+LKS +AKR++ IVPL++++ RA+ ++GTPALSRP ELF Q++AL+P +F +   F +RYCD  Q  +G D
Sbjct:  177 QVIFASKDRVSSERHFVITSYDLASREDIKKQLEKAKYQIVVADESHFLKSREAKRTKKIVPLLKRAKRALLLSGTPALSRPIELFTQISALVP-SFTTAVQFGIRYCDGKQNRYGWD 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2338.6308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK86_ECTSI2.620e-5777.60Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A7S4KWJ5_9EUKA5.950e-3163.10Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A7S3UX31_HETAK9.270e-2852.78Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R8XHD2_9CRUS2.620e-2747.50Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
A0A1Y1XQA7_9FUNG2.920e-2748.31Uncharacterized protein n=1 Tax=Anaeromyces robust... [more]
A0A1Y1UYY1_9FUNG6.650e-2745.16Uncharacterized protein n=1 Tax=Piromyces finnis T... [more]
L1IS15_GUITC8.370e-2750.94Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A1Y2E997_9FUNG2.730e-2648.31Uncharacterized protein n=1 Tax=Neocallimastix cal... [more]
A0A2V3IYF0_9FLOR4.810e-2655.34SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A507EUN4_9FUNG6.240e-2648.31Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 16..109
e-value: 5.7E-11
score: 41.7
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 2..119
e-value: 1.9E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 10..119
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..101
score: 9.623
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2338contigH-paniculata_contig2338:4909..12566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2338.6308.1mRNA_H-paniculata_contig2338.6308.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2338 4909..12566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2338.6308.1 ID=prot_H-paniculata_contig2338.6308.1|Name=mRNA_H-paniculata_contig2338.6308.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MYQNGAQIVKDAKTGVRDDALLVIVSYELASRMVDNSKLWKGQFQVVVAD
ESHYLKSVDAKRSQAIVPLMQKSARAMCVTGTPALSRPAELFMQLNALMP
KAFPSFHPFAVRYCDAHQGPFGLDVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase