prot_H-paniculata_contig2338.6307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2338.6307.1
Unique Nameprot_H-paniculata_contig2338.6307.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 3.260e-48
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 0
Query:    1 ELPSFIKSLVKSLQKGPGGTVAVRGVEDG--AVSRQRDDAEIEEEIRHRMESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQIVKDAKTGVRD 144
            +LP F+++L+ S++K            DG  A+S Q    E+++EI  RMESVPE LMS+LY FQVEC+ FAIR+KG++L+GDEMGLGKTLQALAVACAYREDWP+LVVAPSSL+ NW+NEA+KWVPGLT +  QIV+DAK GVRD
Sbjct:   72 DLPPFVETLLASIKK------------DGSDALSEQ----EMKDEISLRMESVPEDLMSTLYQFQVECLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKEAIQIVRDAKMGVRD 201          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: A0A7S1FGM3_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FGM3_NOCSC)

HSP 1 Score: 102 bits (255), Expect = 9.690e-26
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 0
Query:   49 ESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGL 127
            E++P  L ++L PFQ   V FAIRR+GR+LIGDEMGLGKTLQA+AV C +RE+WP+L+V P+S+R  W +E  +WVP L
Sbjct:   16 ENLPPALDAALMPFQRAGVAFAIRREGRVLIGDEMGLGKTLQAIAVCCRFRENWPVLIVVPNSVRLVWADELERWVPEL 94          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: L8GX54_ACACA (Helicase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX54_ACACA)

HSP 1 Score: 111 bits (277), Expect = 1.300e-25
Identity = 49/93 (52.69%), Postives = 69/93 (74.19%), Query Frame = 0
Query:   47 RMESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQIVKDAK 139
            +++ +P  L+++LYPFQ E V+FA++R GR LI DEMGLGKTLQA+A+A  Y+EDWP+LVVAPSS+R  W +   KW+PGL     +++   K
Sbjct:  353 QLDKIPVGLLNALYPFQREGVMFALQRNGRALIADEMGLGKTLQAIAIAAYYKEDWPVLVVAPSSVRVQWADNFEKWIPGLRPDQIKVIMKTK 445          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: L1JAD3_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAD3_GUITC)

HSP 1 Score: 108 bits (271), Expect = 4.160e-25
Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = 0
Query:   43 EIRHRMESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQI 134
            ++     ++P  L SSL PFQ + V FA++RKGR+LIGDEMGLGKTLQALAVA AY+ +WP+L++ PSSLR NW  E  +W+ G+  +  ++
Sbjct:    1 DVEEAYSALPSLLKSSLLPFQRDGVRFALKRKGRVLIGDEMGLGKTLQALAVAAAYKREWPLLIICPSSLRLNWAQECSRWLEGMKEEPLEV 92          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: A0A8J8P6P2_HALGN (Helicase ATP-binding domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P6P2_HALGN)

HSP 1 Score: 108 bits (271), Expect = 8.400e-25
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 0
Query:   46 HRMESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWV 124
            + M++VPE L   L+PFQ E V+F I+R GR L+GDEMG+GKT+QA+AV+C Y EDWP+L+V PSSLR  WQ+E  KW+
Sbjct:  381 YSMQNVPEDLRQYLFPFQKEAVIFGIKRHGRFLLGDEMGVGKTIQAIAVSCVYAEDWPLLIVCPSSLRFTWQDELQKWL 459          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: A0A3S1BYG0_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BYG0_ELYCH)

HSP 1 Score: 108 bits (269), Expect = 1.540e-24
Identity = 50/93 (53.76%), Postives = 70/93 (75.27%), Query Frame = 0
Query:   48 MESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQIVKDAKT 140
            + SVPE L+++L  FQ E V  AI RKGR+L+ D+MGLGKTLQA+ VA  YREDWP+LVVAPSS+R +W  +  +W+P ++N +  +V+ +KT
Sbjct:  208 LSSVPEGLVNTLKAFQREGVNIAIHRKGRLLLADDMGLGKTLQAICVAAYYREDWPLLVVAPSSVRFDWAQQICRWLPNVSNCDVNVVQSSKT 300          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: A0A1X1BIW6_9APIC (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Babesia sp. Xinjiang TaxID=462227 RepID=A0A1X1BIW6_9APIC)

HSP 1 Score: 108 bits (269), Expect = 1.610e-24
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   45 RHRMESVPETLMSSLY----PFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQ-NTQIVKDAKTGVRD 144
            R  ME +PE +  SLY    PFQ E + F IR+ GR+LIGDEMGLGKTLQALA++  Y  DWP+L+V PSSLR  W++E +KW+P L N+ +   VK+ K  + D
Sbjct:  642 RKNMEKIPEIVGQSLYTQLKPFQCEGLNFGIRKNGRVLIGDEMGLGKTLQALAISAFYWIDWPLLIVCPSSLRFQWRDECIKWLPHLINEYDVCTVKNGKMAIPD 746          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: A0A5J4WMN1_9EUKA (Putative helicase carboxy-terminal domain protein n=2 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WMN1_9EUKA)

HSP 1 Score: 107 bits (268), Expect = 2.220e-24
Identity = 47/81 (58.02%), Postives = 66/81 (81.48%), Query Frame = 0
Query:   43 EIRHRMESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKW 123
            E   +++ +P  L S+L+PFQ E V++AIRR+GR+LIGDEMGLGKTLQALA++CAY EDWP++V+ PS+LR +W +E  +W
Sbjct:  267 EEEQQLQLIPVALRSALFPFQKEGVIYAIRRQGRVLIGDEMGLGKTLQALAISCAYPEDWPLIVICPSTLRFHWADEIERW 347          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: A0A1R2CQ71_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CQ71_9CILI)

HSP 1 Score: 107 bits (266), Expect = 3.810e-24
Identity = 47/99 (47.47%), Postives = 71/99 (71.72%), Query Frame = 0
Query:   42 EEIRHRMESVPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQIVKDAKT 140
            +E+    + +P   ++ +Y FQ+E V FA+   GR LIGDEMG+GKT+QA+A A AY ++WP+LV+ P+S++ NW++E LKWVPGL  ++  +VK  KT
Sbjct:  174 DEVPKTADVLPPEFLAKMYAFQIEGVNFALAHFGRALIGDEMGVGKTIQAIAAAYAYVDEWPVLVICPASIKLNWRDEFLKWVPGLEKKDFYVVKSKKT 272          
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Match: UPI000742A16C (DNA annealing helicase and endonuclease ZRANB3-like n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI000742A16C)

HSP 1 Score: 98.6 bits (244), Expect = 5.940e-24
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   51 VPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYREDWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQIVKD 137
            +P  L+  L PFQ E V FA+ + GR +I DEMGLGKT+QA+AVACAY++DWP+LVV PSSL+  W  E  +W+P L   +  +V++
Sbjct:   22 LPPKLLQRLMPFQREGVEFALSKSGRCMIADEMGLGKTVQAIAVACAYKQDWPLLVVVPSSLKYPWIEELERWIPELQPTDINLVEN 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2338.6307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK86_ECTSI3.260e-4863.01Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A7S1FGM3_NOCSC9.690e-2659.49Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
L8GX54_ACACA1.300e-2552.69Helicase, putative n=1 Tax=Acanthamoeba castellani... [more]
L1JAD3_GUITC4.160e-2552.17Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A8J8P6P2_HALGN8.400e-2559.49Helicase ATP-binding domain-containing protein n=1... [more]
A0A3S1BYG0_ELYCH1.540e-2453.76Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A1X1BIW6_9APIC1.610e-2452.38DNA annealing helicase and endonuclease ZRANB3 n=1... [more]
A0A5J4WMN1_9EUKA2.220e-2458.02Putative helicase carboxy-terminal domain protein ... [more]
A0A1R2CQ71_9CILI3.810e-2447.47Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
UPI000742A16C5.940e-2451.72DNA annealing helicase and endonuclease ZRANB3-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 78..128
e-value: 5.9E-10
score: 38.4
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 27..144
e-value: 1.8E-21
score: 78.0
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 34..137
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 40..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2338contigH-paniculata_contig2338:985..4965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2338.6307.1mRNA_H-paniculata_contig2338.6307.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2338 985..4965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2338.6307.1 ID=prot_H-paniculata_contig2338.6307.1|Name=mRNA_H-paniculata_contig2338.6307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
ELPSFIKSLVKSLQKGPGGTVAVRGVEDGAVSRQRDDAEIEEEIRHRMES
VPETLMSSLYPFQVECVLFAIRRKGRILIGDEMGLGKTLQALAVACAYRE
DWPILVVAPSSLRRNWQNEALKWVPGLTNQNTQIVKDAKTGVRDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase