mRNA_H-paniculata_contig2338.6309.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2338.6309.1
Unique NamemRNA_H-paniculata_contig2338.6309.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 6.240e-22
Identity = 84/237 (35.44%), Postives = 112/237 (47.26%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLLLDDEVADSAVTPGKGDS----GDGGAKKTFVKQENP--------------------TSSPPLSKPAA------SVSSSGG-------AAEWACYSCTYTNPVSKKRCELCKSAR 600
            VRYC A QGPFGLDV GSSN+ ELKMIL   +M+RRLKEEV                         ++L  QK  I+ ++ S  DD+E  RL G  + +T++LY  +G+AKI+GVL HL R +L +E+      PG G S    G GG                               +++PPL +         +VS   G         EWAC  CTY NP S++ C+LC + R
Sbjct:  294 VRYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEV-------------------------AELMEQKEAIKSSLGSVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHL-RGMLTEELPAEGHPPGGGVSPNRTGGGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPLPRGKGPGGLWGNVSVDDGDEGXXXXXXEWACSRCTYHNPASQRECDLCDTPR 504
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: A0A2D4EQA4_MICCO (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Micrurus corallinus TaxID=54390 RepID=A0A2D4EQA4_MICCO)

HSP 1 Score: 79.3 bits (194), Expect = 3.660e-13
Identity = 50/123 (40.65%), Postives = 71/123 (57.72%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            VRYCDA QGP+G D +GSSN GELK++L + VMIRRLK +VLS  LP K R+MV +  +    +  ++L +   E+ K  KS  +  E + +           Y  T +AKI  +L ++  LL
Sbjct:   45 VRYCDAKQGPWGWDYSGSSNLGELKLLLEETVMIRRLKSDVLSQ-LPAKQRKMVVITPEGINTRTKAELAAAAKEMAKGFKSKQEQKEALIV----------FYNKTSEAKIHCILEYILDLL 156
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: L1IS15_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IS15_GUITC)

HSP 1 Score: 79.7 bits (195), Expect = 1.990e-12
Identity = 44/123 (35.77%), Postives = 75/123 (60.98%), Query Frame = 1 
Query:    4 RYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSE-KMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            RYCDAHQGPFGL+ +G+SN  EL ++L Q  M+RRLK++VL+  LP K RQ + +       K  +    +  E+E+  +  ++DSE + R +  ++ +  ++Y  TG AK++ +  ++  L+
Sbjct:  257 RYCDAHQGPFGLETSGASNLEELHVLLDQHTMVRRLKKDVLTQ-LPAKRRQKILIKISEAESKRFATEMDKLKELERVTQDEEEDSEARFRAQSRKKALIMKMYVDTGVAKLQAIQEYVADLI 378
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: A0A670YCP3_PSETE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=4 Tax=Elapidae TaxID=8602 RepID=A0A670YCP3_PSETE)

HSP 1 Score: 79.7 bits (195), Expect = 3.010e-12
Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            VRYCDA QGP+G D +GSSN GELK++L + VMIRRLK +VLS  LP K R+MV V  +    +  ++L +   E+ K  KS  +  E + +           Y  T +AKI  +L ++  LL
Sbjct:  661 VRYCDAKQGPWGWDYSGSSNLGELKLLLEETVMIRRLKSDVLSQ-LPAKQRKMVVVTPEGINSRTKAELAAAAKEMAKGFKSKQEQKEALIV----------FYNKTSEAKIHCILEYILDLL 772
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: A0A6I9Z0A7_9SAUR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=6 Tax=Colubridae TaxID=8578 RepID=A0A6I9Z0A7_9SAUR)

HSP 1 Score: 79.3 bits (194), Expect = 4.000e-12
Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            VRYCDA Q P+G D +GSSN GELK++L + +MIRRLK EVLS  LP K R+M+ +  +    +  ++LT+   E+ K  KS  +  E + +           Y  T +AKI  +L ++  LL
Sbjct:  658 VRYCDAKQRPWGWDYSGSSNLGELKLLLEETIMIRRLKSEVLSQ-LPAKQRKMIVITPEGIDTRTKAELTAAAKEMAKGFKSKQEQKEALLI----------FYNKTSEAKIHCILEYILDLL 769
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: SMAL1_XENTR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=7 Tax=Xenopus tropicalis TaxID=8364 RepID=SMAL1_XENTR)

HSP 1 Score: 77.0 bits (188), Expect = 2.180e-11
Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            +RYCDA Q P+G D +GSSN  ELK++L + +MIRRLK EVLS  LP K R+MV V  +    K  + L +   E+ K  KS   + E + L           Y  T +AKI+ VL ++  LL
Sbjct:  613 IRYCDAKQMPWGWDYSGSSNLNELKLLLEESIMIRRLKSEVLSQ-LPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGFKSKVQEKEALLL----------FYNRTAEAKIRSVLEYIMDLL 724
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BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: A0A482SB64_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB64_9ARCH)

HSP 1 Score: 77.0 bits (188), Expect = 2.190e-11
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 1 
Query:    4 RYCDAHQGPFG---LDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLLLDDEVA 387
            RYCDA    F    LDV GSSN  ELK +L  +VMIRRLK  VL+  LP+K R++V V  D + + E+  +  Q + +E+      D   KMRL   ++ + +Q Y  TG+AKIK +  ++   + +  +A
Sbjct:  170 RYCDAKPAKFNTSFLDVKGSSNEQELKCLLEGLVMIRRLKSNVLT--LPDKVRKVVYVDIDDDKVNEIKSIQRQLSHLEQQYNQTVDSEIKMRLGKEKESLLTQYYKVTGQAKIKSIEKNIMFYIREARMA 298
[Close]
BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: SMAL1_XENLA (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=2 Tax=Xenopus laevis TaxID=8355 RepID=SMAL1_XENLA)

HSP 1 Score: 77.0 bits (188), Expect = 2.190e-11
Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            +RYCDA Q P+G D +GSSN  ELK++L + +MIRRLK EVLS  LP K R+MV V  +    K  + L +   E+ K  KS   + E + L           Y  T +AKI+ VL ++  LL
Sbjct:  631 IRYCDAKQMPWGWDYSGSSNLNELKLLLEESIMIRRLKSEVLSQ-LPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGFKSKVQEKEALLL----------FYNRTAEAKIRSVLEYIIDLL 742
[Close]
BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: UPI001E85CB09 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI001E85CB09)

HSP 1 Score: 76.3 bits (186), Expect = 3.920e-11
Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            +RYCDA + P+G D +GSSN GELK++L + +MIRRLK +VLS  LP K R+MV V  D    +  ++L +   ++ K  KS  ++ E + +           Y  T +AKI+ V+ ++  LL
Sbjct:  653 LRYCDAKKKPWGWDYSGSSNLGELKLLLEESIMIRRLKSDVLSQ-LPAKQRRMVVVAPDGINARTKAELAAAAKQMSKGYKSKQEEKEALII----------FYNRTAEAKIRSVIEYILDLL 764
[Close]
BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Match: A0A452I1I6_9SAUR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=15 Tax=Testudinoidea TaxID=8486 RepID=A0A452I1I6_9SAUR)

HSP 1 Score: 75.9 bits (185), Expect = 5.080e-11
Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 1 
Query:    1 VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKDRQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVTSQLYCATGKAKIKGVLAHLTRLL 369
            +RYCDA + P+G D +GSSN GELK++L + VMIRRLK +VLS  LP K R+MV V  +    K  ++L +   E+ K  +S   + E + L           Y  T +AKI+ V+ ++  LL
Sbjct:  650 LRYCDAKKMPWGWDYSGSSNLGELKLLLEESVMIRRLKSDVLSQ-LPAKQRKMVVVAPEGMNAKTKAELAATAKEMAKGYRSKQKEKEALLL----------FYNRTAEAKIRSVIEYILDLL 761
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2338.6309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK86_ECTSI6.240e-2235.44Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A2D4EQA4_MICCO3.660e-1340.65Helicase C-terminal domain-containing protein (Fra... [more]
L1IS15_GUITC1.990e-1235.77Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A670YCP3_PSETE3.010e-1241.46SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A6I9Z0A7_9SAUR4.000e-1239.84SWI/SNF-related matrix-associated actin-dependent ... [more]
SMAL1_XENTR2.180e-1141.46SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A482SB64_9ARCH2.190e-1138.17DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
SMAL1_XENLA2.190e-1141.46SWI/SNF-related matrix-associated actin-dependent ... [more]
UPI001E85CB093.920e-1138.21SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A452I1I6_9SAUR5.080e-1139.84SWI/SNF-related matrix-associated actin-dependent ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2338contigH-paniculata_contig2338:12519..17076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.5
Seed ortholog evalue1.8e-21
Seed eggNOG ortholog2880.D8LK86
KEGG koko:K14440
Hectar predicted targeting categoryother localisation
EggNOG free text desc.annealing helicase activity
EggNOG OGsCOG0553@1,KOG1000@2759
Ec32 ortholog descriptionSNF2-related HARP domain and Zn finger helicase protein
Ec32 orthologEc-16_002430.1
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons3
Model size1242
Cds size1242
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2338.6309.1prot_H-paniculata_contig2338.6309.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2338 12519..17076 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929662.724664-CDS-H-paniculata_contig2338:12518..127131622929662.724664-CDS-H-paniculata_contig2338:12518..12713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2338 12519..12713 +
1691480956.7742083-CDS-H-paniculata_contig2338:12518..127131691480956.7742083-CDS-H-paniculata_contig2338:12518..12713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2338 12519..12713 +
1622929662.7360725-CDS-H-paniculata_contig2338:13244..133821622929662.7360725-CDS-H-paniculata_contig2338:13244..13382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2338 13245..13382 +
1691480956.7878487-CDS-H-paniculata_contig2338:13244..133821691480956.7878487-CDS-H-paniculata_contig2338:13244..13382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2338 13245..13382 +
1622929662.7496495-CDS-H-paniculata_contig2338:16167..170761622929662.7496495-CDS-H-paniculata_contig2338:16167..17076Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2338 16168..17076 +
1691480956.7975557-CDS-H-paniculata_contig2338:16167..170761691480956.7975557-CDS-H-paniculata_contig2338:16167..17076Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2338 16168..17076 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2338.6309.1

>prot_H-paniculata_contig2338.6309.1 ID=prot_H-paniculata_contig2338.6309.1|Name=mRNA_H-paniculata_contig2338.6309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=414bp
VRYCDAHQGPFGLDVNGSSNTGELKMILAQVVMIRRLKEEVLSDMLPEKD
RQMVDVPCDAEIMKEVSDLTSQKAEIEKAIKSADDDSEKMRLRGMQQGVT
SQLYCATGKAKIKGVLAHLTRLLLDDEVADSAVTPGKGDSGDGGAKKTFV
KQENPTSSPPLSKPAASVSSSGGAAEWACYSCTYTNPVSKKRCELCKSAR
PTSGKISPPPATDTTCPPPVTAENVIAPAAAAAAVAMARKGARKRRSVDD
IGSGRRASTGSDEEDDGAWMMDSDDGECGDGGGGGGGGGGVSGGSDRRRV
LSRRNCVLNAPHDRAAAEGNDGMEGGVRGSLRQRRLALDSRPEEGSGGQR
ARREDQGEKAAGAKAEAGGGGGGGGGDCSSSDDFAITLSGGGTISGRRGS
GGGQRLSGGSDASC
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mRNA from alignment at H-paniculata_contig2338:12519..17076+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2338.6309.1 ID=mRNA_H-paniculata_contig2338.6309.1|Name=mRNA_H-paniculata_contig2338.6309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4558bp|location=Sequence derived from alignment at H-paniculata_contig2338:12519..17076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAGGTATTGCGATGCACACCAAGGGCCGTTTGGGCTCGACGTCAACGG
TTCTTCTAACACGGGCGAGCTGAAAATGATCCTCGCGCAAGTTGTGATGA
TCCGCCGCCTAAAAGAGGAAGTTCTGTCGGACATGCTCCCGGAGAAAGAC
CGGCAGATGGTGGACGTCCCTTGCGACGCCGAAATCATGAAGGAGGTGTG
TACTATCATTTACTTTCGGGCCTCTGGTCACAGAGCGCTGGGCCGGGGTG
TTTGGTGGACTATTTTAGTGAGATGTAACTGTGCTCGACAAAGCTATTTT
TGATAATTATCCAAACTATTGCCTACTCAAGCTTTCAAAGTACTCATGAG
GACACACTGCATATCCCGTACATAAGCATTTAAAAATACTACTTTCTTGT
ATGCAAGCATTTTGCTTTGGTTTGGGCGCGACGGGCGGGGAGAAAACGTC
TGATTTCCTCTTTTTATCCATGTAGTCATCATTTGGGCGGTCGTTGACCC
ATTTATCGATTCGTTCGTTTACGTCTTCCCCTCTTTAATACCTGCGTTCT
TTGGGTCATTCATACCGCACAACAACGAGACCGCTGTGACCCGTGTGTGT
ATGCACTCATGTTTGTTTTGCGCATGAAAGTGTTACCTGTGTTTATGTTG
TGTCGTGGCTGTGGGAACTGCAAAAATGCATTTGTTTTGGTTCCAAGTCT
ATCGTGTGCCTTGTGTTGCCGAGCAGGTATCAGACCTCACGAGCCAGAAG
GCAGAGATCGAGAAGGCCATAAAATCCGCCGACGACGACTCCGAGAAGAT
GCGCTTGAGGGGGATGCAGCAGGGCGTCACATCGCAGCTATACTGCGCGA
CTGGAAAGGCAAAGGTACGTTTTATCAATAGGATACATATGTCGCACTAT
GCTGTAGTGATACGGTACATTGCCCCGATTGATGCAATGGTCTTACGGGG
GTACCTATAGTCACTCCGGGGATACATATATATATATATATATATATATA
TTATATATCCACACACTGCATTTCCCTGTCTATGCGAGTACGTGTTATAT
ATATAATGTATTCATTTTCTGGGTCGGTAGCACACACATCTGCCTATACG
CGACCTTATCAGTACATCTACTATGCCCGAGTGAGTACAAACTCTAGGTG
AACCCAAAAGCCATAAAAGTTAGAAATACGTAAACGTTAACTTGAAATTC
TGATTCTATCAGACATTAACTGACTAGTGTTATGTTTTGATGTTGATACA
CATATTCTCTACATACGTTTTTTTTTCGAGAAGCGCGACCAAACTGTACA
TCGTCCAAATAGCCGGGCAATCTACCTGAATGACAGCTGTCGAGATGTTT
CCAACGATATAATGTTCCCAGTCACCTCTTGGTCTTGTTGTCGATTGTCT
AGATGGATCTTTCGATTTCGATGCATATGGTACTCTTTAAGACCCTGTGA
TTGGTTGGCACAAATTTGCAAGGCCTTTCACATGACTGATCGCGAATCGA
GAAATAAATCGCATGACCATTCGCGAGCCGGGCAAATCCTTCCATGACTA
ATCGTGAACCAGCCGCAAGAAGTGAAAATCTCATGTGACCGATCGCGAAT
CGGGTAAAATCTCACATGGCCAAGCGCTTATCGGTTCTCGGGCCTGGTCA
TGTGAAAAAGACAGATCTAATGCCGATCGTCTAAAAAGCGTTGAAAAGTT
GTATCTTCGGGTTGGGTTCCATTTACAGACCCTAGACACAGTATCGAATC
AACGTGATAATCGATAGCGAGATAAGATGGGCCCTTAGCACCCGAGGTTT
CGAGAATACCAAGGACTACACACACTTTCACTTGAATTGTTTTGTTACAC
ATCGTACACTACATGTGCTTTTGTACCCTTCTGGGGTTATCACATATGAA
CGAGTAAAACATCCATAAATGGCAGTTTGGAGCTGCAGTATCAAGAGTGC
CTCGTATAGTCGAGGTCTTTTCGATCTGGTGTATTGAAATATTTGAATGC
ATTCGTTCTCTCAACCAAAATGATTTTGTTGGTGTCCTTGCTTGTCTCGA
GGTCAATTGCCATCTATGAATCTCGTAAAGATGTGAAACGTGCAATTTCC
TTGTACCCTTACGGATGTCCGCCGTATCTGCATTCCTTTCCTGTGTGAAA
CAGTACCACTTTGAGCTGTTTTTGTGCACGTCTGCTATACTTTCATCGGT
AGGTAAACGTCCCGACACCGCTAATATGACCAGATTACTTGCCCCCACTT
GCCGCCACAGTAGCAGATTTGATGTGCACAGACATGGGTGAACCGCCCCT
GTACTTGAGCAACCAATGATGAACATCGGAATCTCGCATGACATGGGCAT
TGGGCCCCGACGCGTCTACGGCTCGATTCTCGTTGTTTTTATCTTCCGTG
TGTTTTAGGTTCGCTCATCCGGCACATCCCGCGTGTTTGCTCCAGGTTGC
TTCACATATCCCTCTCCAAGCCCCCCGCACACCAAAGGTGTTTTTTGTAC
TCCTCCTTTACCCCCCCTCTCTTGGTTAAGGCGAGATTCATTGTTGCAGG
AAAGCAGGGACCTTCTTGGTAACGGTCAAAAGACAAAACGGCGCGATTTT
TTTTGCCCCTGTACTCTTTAGTACCCGGAATACGGCATTTGGGCACCACA
GTACCCGCGGTACGAAGTTTAGTTTCCTGGGTATGGCACGACTCCCCGTT
ACGGTATGTTTTGGTTTTGCGGTACGTGCGATGGTAATTCAAAATCGCTG
TACCTCCAGTGCCGTTCTTTGCAACCACGGGAACTGGATAAGTATGACGG
AAAGCAGGAATTCCACATTTAGACTCGTCCATTCAATAATTTCCAGGGCT
CCTTCCACTGGGGGGGACAGAATACTGCACGAAACAACTTGAGTAATTCG
ATTCTTGGAAATGAAAGGCTCATCTACATTACTCCATAAGGGAATGCACT
CACGAAACCCTGCTCACGGTTGAGGTAGCCATCAGAAAAAGAACTCATAA
GCGTAGAAGTGTAAGGGTGCTGCCTCATTAAGAAAGCGCAGGTGACGGTG
CAGGGCAGATACACGAGAACCGCCCTCCAGAGCTGCTGTGTGATGTTATG
ACGCCGAGCGTTTCCTATGGCACACACAGATATATAACTAAGCCTCAAGT
GAAAAGTTCGAGCTGGATGGCAAAACGCCAACGACGGTGACTGCTCACTA
TCTGCATATTTGTCGGCGTGGTTGGTATGTGGCATTGGTGCGTTGGCACA
CCTGCCAGCGAGGGAAAAAGAACAGAAATATCCTGAACAGTTGCTACCTT
ATATTCCTAAATCAATGAACAGAAGTACATCCCGATATTTTATATTTTGA
AGCCATTTATTGAGTCGACCTGTTGACCATCTCGTGCGCATCTGCAAAAA
CATTTTCGCCAAAAGAAAACGCTTTATTCGAATAACCCCAAGTATACGGC
TTCGAGAACCACCCTATGTATTTCACAGTACCTTATTCTCCCGGGGACAA
CATGGAACACATTGCCCAAATCAAGCTGCATTGCCGTACGGTAAGAGCAG
CACGCGTTATCTACTAATCTCCTCCTCTCTTATGTATATGTATGTATGTG
TATGTATGTGTATGTATGTCTGTGTATGTATGTCCGTGTTCTTGTGTAGA
TCAAGGGCGTCCTAGCACACTTGACAAGGCTACTACTAGACGACGAGGTG
GCGGACAGTGCGGTCACACCTGGGAAGGGAGACAGCGGTGACGGCGGCGC
CAAGAAAACCTTTGTAAAACAGGAGAACCCTACCTCTTCCCCACCTCTTT
CAAAGCCTGCCGCGTCAGTATCGTCGTCTGGTGGCGCGGCAGAGTGGGCG
TGCTATTCTTGTACGTACACTAATCCGGTATCGAAAAAACGGTGCGAGTT
GTGCAAATCCGCGCGACCTACTAGTGGCAAAATATCGCCTCCCCCCGCTA
CGGATACCACGTGCCCACCACCTGTCACAGCTGAGAATGTCATTGCGCCG
GCGGCGGCCGCGGCAGCAGTGGCGATGGCAAGAAAAGGAGCACGAAAACG
ACGCAGTGTAGATGACATCGGAAGCGGTCGGCGTGCATCTACCGGTTCCG
ATGAGGAAGACGACGGGGCGTGGATGATGGACAGCGACGATGGTGAATGT
GGCGACGGAGGCGGAGGCGGAGGCGGCGGCGGTGGCGTCAGCGGTGGTTC
TGATCGTCGAAGGGTATTGTCGCGTCGCAACTGTGTCCTGAACGCACCCC
ACGACAGAGCGGCGGCAGAAGGGAACGACGGGATGGAGGGCGGTGTCCGC
GGCAGCTTAAGGCAGAGAAGGCTCGCCCTCGACAGTAGGCCCGAAGAAGG
TAGTGGCGGGCAAAGGGCGCGCCGGGAAGATCAGGGTGAAAAGGCAGCCG
GGGCCAAGGCCGAGGCCGGCGGTGGCGGTGGCGGTGGCGGTGGCGATTGC
AGCAGTAGTGACGACTTCGCTATAACGCTGAGCGGGGGGGGCACTATATC
CGGTCGGCGTGGTTCCGGCGGGGGTCAACGGTTGAGCGGCGGCAGCGACG
CTAGTTGT
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Coding sequence (CDS) from alignment at H-paniculata_contig2338:12519..17076+

>mRNA_H-paniculata_contig2338.6309.1 ID=mRNA_H-paniculata_contig2338.6309.1|Name=mRNA_H-paniculata_contig2338.6309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2484bp|location=Sequence derived from alignment at H-paniculata_contig2338:12519..17076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAGGTATTGCGATGCACACCAAGGGCCGTTTGGGCTCGACGTCAACGG
TTCTTCTAACACGGGCGAGCTGAAAATGATCCTCGCGCAAGTTGTGATGA
TCCGCCGCCTAAAAGAGGAAGTTCTGTCGGACATGCTCCCGGAGAAAGAC
CGGCAGATGGTGGACGTCCCTTGCGACGCCGAAATCATGAAGGAGGTCAG
GTATTGCGATGCACACCAAGGGCCGTTTGGGCTCGACGTCAACGGTTCTT
CTAACACGGGCGAGCTGAAAATGATCCTCGCGCAAGTTGTGATGATCCGC
CGCCTAAAAGAGGAAGTTCTGTCGGACATGCTCCCGGAGAAAGACCGGCA
GATGGTGGACGTCCCTTGCGACGCCGAAATCATGAAGGAGGTATCAGACC
TCACGAGCCAGAAGGCAGAGATCGAGAAGGCCATAAAATCCGCCGACGAC
GACTCCGAGAAGATGCGCTTGAGGGGGATGCAGCAGGGCGTCACATCGCA
GCTATACTGCGCGACTGGAAAGGCAAAGGTATCAGACCTCACGAGCCAGA
AGGCAGAGATCGAGAAGGCCATAAAATCCGCCGACGACGACTCCGAGAAG
ATGCGCTTGAGGGGGATGCAGCAGGGCGTCACATCGCAGCTATACTGCGC
GACTGGAAAGGCAAAGATCAAGGGCGTCCTAGCACACTTGACAAGGCTAC
TACTAGACGACGAGGTGGCGGACAGTGCGGTCACACCTGGGAAGGGAGAC
AGCGGTGACGGCGGCGCCAAGAAAACCTTTGTAAAACAGGAGAACCCTAC
CTCTTCCCCACCTCTTTCAAAGCCTGCCGCGTCAGTATCGTCGTCTGGTG
GCGCGGCAGAGTGGGCGTGCTATTCTTGTACGTACACTAATCCGGTATCG
AAAAAACGGTGCGAGTTGTGCAAATCCGCGCGACCTACTAGTGGCAAAAT
ATCGCCTCCCCCCGCTACGGATACCACGTGCCCACCACCTGTCACAGCTG
AGAATGTCATTGCGCCGGCGGCGGCCGCGGCAGCAGTGGCGATGGCAAGA
AAAGGAGCACGAAAACGACGCAGTGTAGATGACATCGGAAGCGGTCGGCG
TGCATCTACCGGTTCCGATGAGGAAGACGACGGGGCGTGGATGATGGACA
GCGACGATGGTGAATGTGGCGACGGAGGCGGAGGCGGAGGCGGCGGCGGT
GGCGTCAGCGGTGGTTCTGATCGTCGAAGGGTATTGTCGCGTCGCAACTG
TGTCCTGAACGCACCCCACGACAGAGCGGCGGCAGAAGGGAACGACGGGA
TGGAGGGCGGTGTCCGCGGCAGCTTAAGGCAGAGAAGGCTCGCCCTCGAC
AGTAGGCCCGAAGAAGGTAGTGGCGGGCAAAGGGCGCGCCGGGAAGATCA
GGGTGAAAAGGCAGCCGGGGCCAAGGCCGAGGCCGGCGGTGGCGGTGGCG
GTGGCGGTGGCGATTGCAGCAGTAGTGACGACTTCGCTATAACGCTGAGC
GGGGGGGGCACTATATCCGGTCGGCGTGGTTCCGGCGGGGGTCAACGGTT
GAGCGGCGGCAGCGACGCTAGTTGTATCAAGGGCGTCCTAGCACACTTGA
CAAGGCTACTACTAGACGACGAGGTGGCGGACAGTGCGGTCACACCTGGG
AAGGGAGACAGCGGTGACGGCGGCGCCAAGAAAACCTTTGTAAAACAGGA
GAACCCTACCTCTTCCCCACCTCTTTCAAAGCCTGCCGCGTCAGTATCGT
CGTCTGGTGGCGCGGCAGAGTGGGCGTGCTATTCTTGTACGTACACTAAT
CCGGTATCGAAAAAACGGTGCGAGTTGTGCAAATCCGCGCGACCTACTAG
TGGCAAAATATCGCCTCCCCCCGCTACGGATACCACGTGCCCACCACCTG
TCACAGCTGAGAATGTCATTGCGCCGGCGGCGGCCGCGGCAGCAGTGGCG
ATGGCAAGAAAAGGAGCACGAAAACGACGCAGTGTAGATGACATCGGAAG
CGGTCGGCGTGCATCTACCGGTTCCGATGAGGAAGACGACGGGGCGTGGA
TGATGGACAGCGACGATGGTGAATGTGGCGACGGAGGCGGAGGCGGAGGC
GGCGGCGGTGGCGTCAGCGGTGGTTCTGATCGTCGAAGGGTATTGTCGCG
TCGCAACTGTGTCCTGAACGCACCCCACGACAGAGCGGCGGCAGAAGGGA
ACGACGGGATGGAGGGCGGTGTCCGCGGCAGCTTAAGGCAGAGAAGGCTC
GCCCTCGACAGTAGGCCCGAAGAAGGTAGTGGCGGGCAAAGGGCGCGCCG
GGAAGATCAGGGTGAAAAGGCAGCCGGGGCCAAGGCCGAGGCCGGCGGTG
GCGGTGGCGGTGGCGGTGGCGATTGCAGCAGTAGTGACGACTTCGCTATA
ACGCTGAGCGGGGGGGGCACTATATCCGGTCGGCGTGGTTCCGGCGGGGG
TCAACGGTTGAGCGGCGGCAGCGACGCTAGTTGT
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