prot_H-paniculata_contig2335.6295.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2335.6295.1
Unique Nameprot_H-paniculata_contig2335.6295.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length172
Homology
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: D8LRK4_ECTSI (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK4_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.300e-92
Identity = 134/169 (79.29%), Postives = 148/169 (87.57%), Query Frame = 0
Query:    1 MAAATRLWSFDLIAGPGEAPKNLARPLGFNPQAAIEDDDAGGPSALAQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPL 169
            MA   R W FDL  GPGEAPK+LARPLGFNP A I+DDDA GPSALAQ NLK+KRAMEIALGPGKS++MN FMMYMSGAGIHIFSIMITFMGI+ P+KAIL+VH  FR+VDDGK++LLLPKLIF  +NF GVCV LWKMAKMGLLPVTAADWTSYLVPK+ +E SGVPL
Sbjct:    1 MAPPERTWRFDLNPGPGEAPKSLARPLGFNPGALIDDDDATGPSALAQENLKKKRAMEIALGPGKSILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILSVHSVFRTVDDGKISLLLPKLIFCAVNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 169          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A6H5JF63_9PHAE (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF63_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.850e-52
Identity = 90/150 (60.00%), Postives = 102/150 (68.00%), Query Frame = 0
Query:   57 MEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGA-------------------------------------FRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPL 169
            MEIALGPGK+++MN FMMYMSGAGIHIFSIMITFMGI+ P+KAIL VH                                       FR+VDDGK++LL+PKL+F  LNF GVCV LWKMAKMGLLPVTAADWTSYLVPK+ +E SGVPL
Sbjct:    1 MEIALGPGKTILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILGVHNGMPSSTILRTIPAMPTAHAPAQPAMSSPCPRFPQTYAVFRTVDDGKISLLMPKLLFCALNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 150          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A7S2DUV1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUV1_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.560e-46
Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    8 WSFDLIAGPGEAP--KNLARPLGFNPQAAIEDDDAGGPSALAQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPLNI 171
            W+ DL+  P E    +    PLGF+  A +E D A G        LK K AM+IA  PGK+++MN FMMYM+G+ I+IFSIM+  M +  P  AI  ++ AF  VDDG V L++PKLIF  LN + +CVGLWK  +MGLLP+T+ADWTSYL+ K  V  SGVP+ +
Sbjct:    9 WTVDLVPNPSEHAIIREAVNPLGFDLNALVEVD-AAGKKEKDLKGLKTKMAMDIATAPGKNILMNGFMMYMTGSYINIFSIMMLSMSLWNPLNAIAGINKAFTKVDDGTVDLIMPKLIFFCLNVLSLCVGLWKCGRMGLLPITSADWTSYLLTKVDVSSSGVPILV 173          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A7S2FYU7_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYU7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.710e-46
Identity = 86/168 (51.19%), Postives = 108/168 (64.29%), Query Frame = 0
Query:    8 WSFDLIAGPGEAPKNLAR----PLGFNPQAAIEDDDAGGPSALAQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPLNI 171
            W FDL+  P EA   + R    PLG++P  AIE+ +       + +  K   AM IA GPGK +MMN FMMYMSG+ I+IFSIMIT MG+  P  AI+NV+ AF  VDDG     +PKLIF  LN + +CV LWK   MGLLPVT+ADWTSYL+ K   E SG+P+ +
Sbjct:   11 WRFDLV--PTEADHKILRECEGPLGYDP-GAIEEKETEEKKQGSLSKRKAAMAMNIATGPGKQIMMNGFMMYMSGSQINIFSIMITAMGLWNPINAIVNVNKAFVKVDDGSHDCTMPKLIFCALNLLSLCVALWKCKAMGLLPVTSADWTSYLIEKTNDEMSGIPIPL 175          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A7S2SV60_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV60_9STRA)

HSP 1 Score: 147 bits (370), Expect = 9.490e-42
Identity = 81/168 (48.21%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    6 RLWSFDLIAGPG--EAPKNLARPLGFNPQAAIEDDDAGGPSALAQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPLNI 171
            R W+F L  G    E  K +  PLG+      + D +    A  +A LK K A  +A  PGK ++MN FMMYMSG+ I+IFSIMIT MGI TP  AI  ++  FR V+DG V L +PKLIF  LN + + V +WK   MGLLP+TAADWT YLV K  +E +G+P  I
Sbjct:   13 RAWAFHLSRGGNDHELAKRIEAPLGYVVNYVPDKDVSTKTKADNRAALKSKIAFNMATAPGKQILMNGFMMYMSGSQINIFSIMITTMGIWTPINAIAGINKHFRRVEDGNVDLTMPKLIFFALNILSLGVAMWKCKAMGLLPITAADWTGYLVDKEMLEVTGIPAAI 180          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: W1PHA9_AMBTC (ER membrane protein complex subunit 4 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PHA9_AMBTC)

HSP 1 Score: 124 bits (312), Expect = 4.700e-33
Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    6 RLWSFDLIAGPGEAPKNLARPLGFNPQAAIEDDDAGGPSAL--AQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSG 166
            R W+ DL+    ++ +++  PLGF+ +A++E D+A G      A+A  K ++A E+A  P K++ M AFMM+M+G+ +H+FSI ITF  +  P  A+  V   F    D ++ +L PKL+F  LN  G+ +G+WK+  +GLLP  A+DW S L P   VE SG
Sbjct:    9 RRWAIDLVDTSSQSSRDVPDPLGFS-RASLESDEASGSRQKKEAEAAWKLQKAWEVAQAPFKNLFMMAFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSRIDILAPKLLFIALNLAGLALGVWKLNTLGLLPTHASDWVSTLPPAQEVEFSG 170          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A5D6XRF1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRF1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.660e-32
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    2 AAATRLWSFDLI-AGPGEAPKNLARPLGFNPQ--AAIEDDDAGGPSALAQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPLN 170
            +++T  W  +L  A   + P  L  P+GF     A  E++ A   +A    +LK+KRAMEI + P KS+M   FMM+MSG+ ++IFSIM+T M I+   K++LN+ GAF SV+DG V L+ PKL++   N   V + ++K A MGLLP TAADWT  L  K  +E S    +
Sbjct:    9 SSSTGKWRVELNEARESDLPSRL-EPIGFTRGFVAEKENNSAVAKTASNTLDLKKKRAMEIGMAPFKSLMQTGFMMWMSGSSVNIFSIMVTGMIIMNTFKSLLNLQGAFVSVNDGVVDLVQPKLVYVAGNLANVAMAVYKCANMGLLPTTAADWTWLLPIKQAIETSAYAFD 179          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: F0YNL3_AURAN (ER membrane protein complex subunit 4 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL3_AURAN)

HSP 1 Score: 119 bits (298), Expect = 1.200e-31
Identity = 62/119 (52.10%), Postives = 80/119 (67.23%), Query Frame = 0
Query:   54 KRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAF-RSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVPLNI 171
            +RAME+ + PGK++ M  FMM+MSG+ I+IFSIMIT M  + P K+IL +   F R   D  V L LPKL F G N   + + LWK+  MGLLP+TAADWTS+LV K  VE S VP+ +
Sbjct:    1 QRAMEMGIAPGKNIFMQGFMMWMSGSSINIFSIMITGMAFINPVKSILAIDDTFKRFAHDPAVDLTLPKLAFVGCNCGMIALALWKLNTMGLLPITAADWTSFLVDKTHVESSSVPIAL 119          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A6S9B3P0_9STRA (ER membrane protein complex subunit 4 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9B3P0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.070e-31
Identity = 73/186 (39.25%), Postives = 100/186 (53.76%), Query Frame = 0
Query:    1 MAAATRLWSFDL----------IAGPGEAPKNLARPLGFNPQAAIEDD------DAGGPSALAQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDD--GKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSGVP 168
            ++ A + WS DL          +    +AP  L R   F  Q   E        D    SA+A    K+ RAM +A  PGK ++MN FMMYMSG  ++IFSI +T M ++ P K+I  +   FR  +D  GKV L + KLIF  +N +   VGL+KM  M LLP T+ADW+ Y+V K  +E S +P
Sbjct:    7 LSNAPKRWSIDLNLREQDVGYSLLQQRQAPIGLRRVSAFEKQIDSEGGMGSRTGDKSSSSAMALVAKKKARAMSVATSPGKQILMNGFMMYMSGKTLNIFSISVTSMALMNPLKSIFTMGNTFRQFEDPDGKVDLQMAKLIFLAMNLVWFGVGLYKMGTMRLLPTTSADWSGYIVWKELLETSSIP 192          
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Match: A0A6I9TBA9_SESIN (ER membrane protein complex subunit 4 n=9 Tax=Lamiales TaxID=4143 RepID=A0A6I9TBA9_SESIN)

HSP 1 Score: 119 bits (298), Expect = 6.920e-31
Identity = 64/152 (42.11%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   21 KNLARPLGFNPQAAIEDDDAGGPSAL-AQANLKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAILNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAADWTSYLVPKYPVEHSG--VPL 169
            +++  P GF   +  +DD A       A+AN K ++A E+A  P K++ M AFMM+M+G+ +H+FSI ITF  +L P  A+  V   F    D KV LL+PKL+F  LN +G+ +G+WK+  +GLLP   +DW S L P   VE+SG  +PL
Sbjct:   28 RDILDPPGFTRASQEQDDSAVSKQKKDAEANWKAQKAWEVAQAPFKNLFMMAFMMWMAGSTVHLFSIGITFSALLQPINALRGVGKVFEPYKDNKVDLLVPKLVFIALNLVGLGMGIWKLNTLGLLPTHVSDWVSSLPPPQEVEYSGGGIPL 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2335.6295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK4_ECTSI2.300e-9279.29ER membrane protein complex subunit 4 n=1 Tax=Ecto... [more]
A0A6H5JF63_9PHAE1.850e-5260.00ER membrane protein complex subunit 4 n=1 Tax=Ecto... [more]
A0A7S2DUV1_9STRA1.560e-4649.40ER membrane protein complex subunit 4 n=1 Tax=Dict... [more]
A0A7S2FYU7_9STRA4.710e-4651.19ER membrane protein complex subunit 4 n=1 Tax=Flor... [more]
A0A7S2SV60_9STRA9.490e-4248.21ER membrane protein complex subunit 4 n=1 Tax=Rhiz... [more]
W1PHA9_AMBTC4.700e-3339.88ER membrane protein complex subunit 4 n=1 Tax=Ambo... [more]
A0A5D6XRF1_9STRA8.660e-3242.44ER membrane protein complex subunit 4 n=1 Tax=Pyth... [more]
F0YNL3_AURAN1.200e-3152.10ER membrane protein complex subunit 4 (Fragment) n... [more]
A0A6S9B3P0_9STRA5.070e-3139.25ER membrane protein complex subunit 4 n=2 Tax=Dity... [more]
A0A6I9TBA9_SESIN6.920e-3142.11ER membrane protein complex subunit 4 n=9 Tax=Lami... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009445TMEM85/ER membrane protein complex subunit 4PFAMPF06417DUF1077coord: 47..155
e-value: 5.7E-36
score: 123.1
IPR009445TMEM85/ER membrane protein complex subunit 4PANTHERPTHR19315FAMILY NOT NAMEDcoord: 5..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2335contigH-paniculata_contig2335:14077..17343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2335.6295.1mRNA_H-paniculata_contig2335.6295.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2335 13707..17343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2335.6295.1 ID=prot_H-paniculata_contig2335.6295.1|Name=mRNA_H-paniculata_contig2335.6295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
MAAATRLWSFDLIAGPGEAPKNLARPLGFNPQAAIEDDDAGGPSALAQAN
LKRKRAMEIALGPGKSVMMNAFMMYMSGAGIHIFSIMITFMGILTPSKAI
LNVHGAFRSVDDGKVTLLLPKLIFAGLNFIGVCVGLWKMAKMGLLPVTAA
DWTSYLVPKYPVEHSGVPLNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009445TMEM85/Emc4