mRNA_H-paniculata_contig23343.6291.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: D7FYU7_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU7_ECTSI) HSP 1 Score: 167 bits (424), Expect = 9.520e-46 Identity = 79/123 (64.23%), Postives = 97/123 (78.86%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTFKVESETQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTLFNFLYSAGFNIK 369
ALPFF+QY QWKSFA + +RK KCR VLEE+LF+LHPWLRIG+RRLKELC+ELS HR FKV+ T TLE FC AQ+ QR LD+ LQ+F+ +V + +MKSCEDTL+NFL+ AGFN+K
Sbjct: 255 AALPFFRQYSQWKSFAXXXXXVHIRKRAKCRAVLEEDLFSLHPWLRIGIRRLKELCYELSTHRAFKVDFGTHTLENFCKAQSTQRDHLDLVLQQFSVNVREAVMKSCEDTLYNFLHRAGFNVK 377
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: UPI0015A952F1 (dynein heavy chain 6, axonemal n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A952F1) HSP 1 Score: 66.6 bits (161), Expect = 2.720e-10 Identity = 36/119 (30.25%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 7 LPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTFKVE-SETQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTLFNFLYSAGF 360
+P F ++R+WK+F W+ +R + +KC+ +L+ NLF ++ LR + ++E+C+ +S ++E T TLE+F AQ Q + L+ F V + + +C L AGF
Sbjct: 275 IPLFARFRRWKAFRVWRTNVRTKSMSKCKQLLQRNLFVVNQSLRPALIDVREMCYRISDMGLCRIEVGHTYTLEEFRQAQYQQLQEVSARLKEFRELVKEVVRSACRTALLE----AGF 389
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: A0A498N1D2_LABRO (Dynein heavy chain axonemal n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498N1D2_LABRO) HSP 1 Score: 63.9 bits (154), Expect = 2.380e-9 Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTFKVESE-TQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTL 333
+ +P F +R+WK+F W+ + +K +KCR +L+ENLF L+ LR + +KE+C+ +S ++E + T TL++F Q Q + L +F V + +C + L
Sbjct: 189 LRIPVFALFRKWKAFRVWRANVCYKKTSKCRRLLQENLFILNESLRPALIDIKEMCYHISDMPLCRIEKDHTYTLKEFQSTQYKQLEEVSSRLGKFRELVMEVARTACRNAL 300
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: A0A498LHA7_LABRO (Dynein heavy chain axonemal n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LHA7_LABRO) HSP 1 Score: 63.9 bits (154), Expect = 2.380e-9 Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTFKVESE-TQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTL 333
+ +P F +R+WK+F W+ + +K +KCR +L+ENLF L+ LR + +KE+C+ +S ++E + T TL++F Q Q + L +F V + +C + L
Sbjct: 290 LRIPVFALFRKWKAFRVWRANVCYKKTSKCRRLLQENLFILNESLRPALIDIKEMCYHISDMPLCRIEKDHTYTLKEFQSTQYKQLEEVSSRLGKFRELVMEVARTACRNAL 401
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: F0WBY1_9STRA (Uncharacterized protein AlNc14C54G4168 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBY1_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 7.570e-6 Identity = 32/116 (27.59%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTFKVE-SETQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTLFNFL 345
+ +PFF+QY++WK+F WK +R K + L L T P+L+ + +L++LC ++ + E + TLE F Q+ R L +L+ F+ + + +++C + F+
Sbjct: 220 LQIPFFKQYKKWKTFTVWKRMIRYCKIRSAKRALTTKLVTAMPFLQNPILQLRKLCLQIGELELIHFEPGKIYTLEAFEREQSIYRDDLIAKLRAFSEESLQICIQTCACVIDAFM 335
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: A0A1Y1V6V7_9FUNG (Dynein heavy chain, cytoplasmic n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V6V7_9FUNG) HSP 1 Score: 52.4 bits (124), Expect = 2.610e-5 Identity = 33/123 (26.83%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTF-KVESETQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTLFNFLYSAGFNI 366
+ +PFFQ+YR WK F +WK + K + + L + LF +HP LR + +++ E+S+ + +++ + L F ++Q + VE+ + K+I + ED L GF +
Sbjct: 114 LKIPFFQRYRLWKIFTQWKSHIFHVKIEQAKKRLSQKLFIVHPILRNALLEVRKKSVEISEKKLLVEIKEKNIELSHFINSQKKWLQKIQVEVMK---TWEKSIREIVEDASKRCLEEQGFEV 233
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: A0A1Y3NLQ1_PIRSE (DHC_N2 domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NLQ1_PIRSE) HSP 1 Score: 52.0 bits (123), Expect = 3.480e-5 Identity = 33/123 (26.83%), Postives = 60/123 (48.78%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTF-KVESETQTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSCEDTLFNFLYSAGFNI 366
+ +PFFQ+YR WK F +WK ++ K + + L + LF +HP LR + +++ E+S+ + +++ + L F ++Q + VE+ + K I ED L GF +
Sbjct: 563 LKIPFFQRYRLWKIFTQWKSYIFHVKIEQAKKRLSQKLFIVHPILRDALLEVRKEAVEISEKKLLVEIKEKNIELSHFINSQKKWLQKMQVEVMK---TWEKKIRVIVEDASKRCLEEQGFEV 682
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Match: A0A126TKP3_MARVE (Axonemal inner arm dynein heavy chain 5 n=1 Tax=Marsilea vestita TaxID=59764 RepID=A0A126TKP3_MARVE) HSP 1 Score: 50.8 bits (120), Expect = 9.020e-5 Identity = 30/108 (27.78%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 1 VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRRLKELCHELSKHRTFKVESET-QTLEKFCDAQAGQRAGLDVELQRFAADVHKTIMKSC 321
+ L F+QY+QWKSFA W+ F+R + + L + LF+++P L+ + + E+C +S F + T +E F + Q +R+ L +L+ + + +C
Sbjct: 311 MKLRVFKQYKQWKSFAIWRRFVRRKLQGLSQKSLIKQLFSINPILQKVLLEICEMCLSMSMLHLFDYKQGTIYNIENFLELQEDKRSNLLEKLREVSEKAATNVKMAC 418 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23343.6291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23343.6291.1 >prot_H-paniculata_contig23343.6291.1 ID=prot_H-paniculata_contig23343.6291.1|Name=mRNA_H-paniculata_contig23343.6291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp VALPFFQQYRQWKSFAEWKGFLRMRKWTKCRVVLEENLFTLHPWLRIGMRback to top mRNA from alignment at H-paniculata_contig23343:2660..3397- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23343.6291.1 ID=mRNA_H-paniculata_contig23343.6291.1|Name=mRNA_H-paniculata_contig23343.6291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=738bp|location=Sequence derived from alignment at H-paniculata_contig23343:2660..3397- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23343:2660..3397- >mRNA_H-paniculata_contig23343.6291.1 ID=mRNA_H-paniculata_contig23343.6291.1|Name=mRNA_H-paniculata_contig23343.6291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig23343:2660..3397- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |