prot_H-paniculata_contig1097.628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1097.628.1
Unique Nameprot_H-paniculata_contig1097.628.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length599
Homology
BLAST of mRNA_H-paniculata_contig1097.628.1 vs. uniprot
Match: A0A6H5JNE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE1_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 4.130e-11
Identity = 71/217 (32.72%), Postives = 97/217 (44.70%), Query Frame = 0
Query:   20 GEVATATLLSFRYPQPTAAGPVPAIPAGAPSSALLPA-------YRPYAFDGDENNDDGPMQLLAGEGLSVCGALFAIFMSVCPLLSYGGGRLGGLKGNSSGGLGASRGELGSLSAGVLGGSGSSGSVVVAAAELLQTLLPFLLEPTPVGPPRTTRKQRQARNHDHSRHAEVVTTGAFGGEWGRSEKAPGLSGPLDSLRFQVMLSRMGCVLVDSGLI 229
            G+ A ATLLSFRYP+   + P     AG  +S              P    G+   + G  +     GLSVCGALFA+F+S CPLL Y       +   S GG  +   E G   A  L  SG    V V A E+LQ ++P+LLEP             +  + D     +  + G  GG       A  ++ P+D+LR Q +L   G VL D+G +
Sbjct:  577 GDAAVATLLSFRYPR---SSPTVRFTAGGAASTASDGGLGERRGAAPSTGGGEVPGEFGKAEPGGSGGLSVCGALFALFLSACPLLGYPAADNARVTFASGGGRVSHGEEEGRRPASEL--SGVPSRVAVLAGEVLQAVIPYLLEP-------------RGDDGDWGESTDSASAGGVGGA-----AAGMITCPVDALRVQEVLCSTGQVLGDTGTV 770          
BLAST of mRNA_H-paniculata_contig1097.628.1 vs. uniprot
Match: D7G379_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G379_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.050e-5
Identity = 53/160 (33.12%), Postives = 72/160 (45.00%), Query Frame = 0
Query:   80 GLSVCGALFAIFMSVCPLLSY------------GGGRLGGLKGNSSGGLGASRGELGSLSAGVLGGSGSSGSVVVAAAELLQTLLPFLLEPTPVGPPRTTRKQRQARNHDHSRHAEVVTTGAFGGEWGRSEKAPGLSGPLDSLRFQVMLSRMGCVLVDSG 227
            G+SVCGALFA+F+S CPLL Y            GGGR+   + +  GG  AS              SG    V V A E+LQ ++P+LLEP             Q  + D     +  + G  GG       A  ++ P+D+LR Q +L   G VL  +G
Sbjct:  581 GVSVCGALFALFLSACPLLGYPAANKARVTLASGGGRVN--RSDEKGGGPASE------------PSGGPSRVAVLAGEMLQAVIPYLLEP-------------QGNDGDWGESTDSASAGGVGGA-----AAGMITCPVDALRVQEVLCSTGQVLGYTG 708          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1097.628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNE1_9PHAE4.130e-1132.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G379_ECTSI1.050e-533.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1097contigH-paniculata_contig1097:803..12267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1097.628.1mRNA_H-paniculata_contig1097.628.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1097 802..12267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1097.628.1 ID=prot_H-paniculata_contig1097.628.1|Name=mRNA_H-paniculata_contig1097.628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp
VPAAFPSSSNYTGAAQVSRGEVATATLLSFRYPQPTAAGPVPAIPAGAPS
SALLPAYRPYAFDGDENNDDGPMQLLAGEGLSVCGALFAIFMSVCPLLSY
GGGRLGGLKGNSSGGLGASRGELGSLSAGVLGGSGSSGSVVVAAAELLQT
LLPFLLEPTPVGPPRTTRKQRQARNHDHSRHAEVVTTGAFGGEWGRSEKA
PGLSGPLDSLRFQVMLSRMGCVLVDSGLINDHGSDVLHSYNTNENVKNNS
NDESPQRQRQRQQSVGDRYPNGSRVRGATNEMEHGSVVGALNPLVNTVLS
LILLLHPSGMAGHQNGNDDAFNDDDDGGGHGSAAGEAVIIAPVEVGLLLR
GLVWSPAVAKHAPWIRQRLRPYLRAVDSMGEIFLEDAQALTMEAEAALHC
EDISNSKGEEGPADTWEWVIFHLDRIGRSMQLLLAVEEPRIVGAAVALWA
SAAVAVTAASSDRETQAKVILAERVGAELLEALIGGSFGEKACYQALEML
ADLVGAGMTTGPTGLAITPRLATALIERGLQDPRLPFPGPMVAALALSLI
VGDNHNFIGSDVRATSVVSSSHSGGGGGGGLTAQPRKAEADVTIRAASF
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