prot_H-paniculata_contig23310.6282.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23310.6282.1
Unique Nameprot_H-paniculata_contig23310.6282.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 3.880e-76
Identity = 117/172 (68.02%), Postives = 130/172 (75.58%), Query Frame = 0
Query:    1 ALPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALS-----------------------QGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAPLRRKEG 149
            ALP+GT GKSYSNFM  N FSPD RSPV +VDDPDLAYVMRRYREVHDLWH L+GLP TVEGELALKWFELVQTGLPVCAL AV GPLAL                        +GSRE+LA+ +VPWA+RAGRR R+PL+CVWYEKRWEQPLE +R +LG+E AP R K G
Sbjct:  170 ALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPAPTTTPSXXXSSGSGRKRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRGKGG 341          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: A0A6T5QVX1_HETAK (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QVX1_HETAK)

HSP 1 Score: 188 bits (477), Expect = 3.460e-57
Identity = 89/143 (62.24%), Postives = 107/143 (74.83%), Query Frame = 0
Query:    1 ALPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAP 143
            +LP GTFG +Y  FM GN FSP+ R+PV FVDD +LAYV+ RYR+VHDLWH L GLPPTV GELALKW EL+QTGLPV AL A  GPLAL+   R +L + Y+PWALRA   +R PL+CV YE  W +PL A+R+ LG+  AP
Sbjct:  112 SLPRGTFGHAYYTFMDGNGFSPEGRAPVRFVDDAELAYVLLRYRQVHDLWHALFGLPPTVGGELALKWLELLQTGLPVAALSAAAGPLALAPADRALLRRVYLPWALRAHGALRAPLMCVRYEALWGEPLAAVRARLGVLPAP 254          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.270e-56
Identity = 88/142 (61.97%), Postives = 109/142 (76.76%), Query Frame = 0
Query:    2 LPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAP 143
            LP+GTFGK+Y++FM  N+F+PDSR PV FVDD DLAYVM RYR+VHDLWHVLSGLPP++EGE+ALKWFE+VQTGLPV A+ A+ G   + +  R  L +K VPWA+RAGRR   PL+ VWYE+ W+  L   R +L  E AP
Sbjct:  104 LPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMARYRQVHDLWHVLSGLPPSLEGEIALKWFEMVQTGLPVAAISALVGAARVPREGRAALRQKLVPWAIRAGRRS-VPLMNVWYERYWDMYLSNFREKLKFEPAP 244          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: W7U2W9_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W9_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.770e-53
Identity = 82/142 (57.75%), Postives = 108/142 (76.06%), Query Frame = 0
Query:    2 LPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAP 143
            LP GTFG+ Y+ F+  + +SPD R+ V FVDD +LA+VM+RYR+VHD WHVL GLPPTV GELALKWFE+VQT LP+ A   V GPL+LS   R++L ++Y+PWA+RA  + R PL+CVWYE+ +E+PLE +R  L +  AP
Sbjct:  165 LPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKAR-PLMCVWYERSFEEPLELMRKRLQIVTAP 305          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: A0A6P7DUU8_SHEEP (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=6 Tax=Pecora TaxID=35500 RepID=A0A6P7DUU8_SHEEP)

HSP 1 Score: 172 bits (435), Expect = 6.660e-51
Identity = 77/145 (53.10%), Postives = 108/145 (74.48%), Query Frame = 0
Query:    1 ALPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAPLR 145
            +LP G+FG +Y +F+  NK SPD+R+P  FVDD +LAYV++RYRE+HD+ H L G+P  + GE+ +KWFE VQTGLP+C L A+FGP+ LS  S ++L  + +PWA+  GRR    ++ V+YE+RWEQPL+A+R ELG+   PLR
Sbjct:  113 SLPEGSFGCAYLHFLDVNKVSPDTRAPTRFVDDEELAYVIQRYREIHDMLHTLLGMPTNILGEIVVKWFEAVQTGLPMCVLSALFGPIQLSAQSLQLLISELIPWAVENGRRA-PCVLSVYYERRWEQPLQALRQELGITEPPLR 256          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: A0A7L2S160_9PASS (COQ4 protein (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L2S160_9PASS)

HSP 1 Score: 168 bits (426), Expect = 8.080e-51
Identity = 76/138 (55.07%), Postives = 103/138 (74.64%), Query Frame = 0
Query:    2 LPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGM 139
            LPNG+ G+ Y  F+  NK SPD+R P  FVDD +LAYV++RYREVHDL H L G+P  + GE+ +KWFE VQTGLP+C LGA FGP+ LS    ++LA + VPWA+R+GR     ++ V+YE+RWEQP+E++R E+G+
Sbjct:   23 LPNGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPVRLSTRKLQVLATELVPWAIRSGRNA-SCILNVYYEQRWEQPVESLREEIGI 159          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: UPI0005299C87 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Chlamydotis macqueenii TaxID=187382 RepID=UPI0005299C87)

HSP 1 Score: 169 bits (428), Expect = 1.050e-50
Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 0
Query:    2 LPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGM 139
            LP+GT G+ Y  F+  NK SPD+R P  FVDD +LAYV++RYREVHDL H L G+P  + GE+ +KWFE VQTGLP+C LGAVFGP+ LS    ++LA + +PWA+R+GR     ++ V+YE+RWEQP+E++R E+G+
Sbjct:   50 LPDGTLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAVFGPIRLSARKLQVLATELIPWAIRSGRNA-SFILNVYYEQRWEQPVESLREEIGI 186          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: UPI000A2B54DB (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X2 n=2 Tax=Suidae TaxID=9821 RepID=UPI000A2B54DB)

HSP 1 Score: 169 bits (429), Expect = 1.730e-50
Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 0
Query:    1 ALPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAPLRRKE 148
            +LP G+FG  Y  F+  N+ SPD+R+P  FVDD +LAYV++RYREVHD+ H L G+P  + GE+ +KWFE VQTGLP+C L A+FGP+ LS  S ++L  + +PWA++ GRR    L+ ++YE+RWEQPL A+R ELG+   P+R K+
Sbjct:   74 SLPEGSFGCEYLRFLDVNRVSPDTRAPTRFVDDEELAYVIQRYREVHDMVHTLLGMPTNIPGEIVVKWFEAVQTGLPMCVLSALFGPIRLSAQSLQVLVSELIPWAVQNGRRA-PCLLHLYYERRWEQPLRALRQELGITEPPVRVKD 220          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: A0A091H8Y5_BUCRH (Uncharacterized protein (Fragment) n=2 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=A0A091H8Y5_BUCRH)

HSP 1 Score: 168 bits (426), Expect = 2.180e-50
Identity = 74/138 (53.62%), Postives = 104/138 (75.36%), Query Frame = 0
Query:    2 LPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGM 139
            LP+GT G+ Y  F+  NK SPD+R P  F+DD +LAYV++RYRE+HDL H L G+P  + GE+ +KWFE VQTGLP+C LGA+FGP+ LS    ++LA + VPWA+R+GR     ++ V+YE+RWEQP+E++R E+G+
Sbjct:   51 LPDGTLGREYVRFLEDNKVSPDTRMPTKFIDDEELAYVIQRYREIHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAMFGPVRLSTRKLQVLATELVPWAIRSGRNA-SCILNVYYEQRWEQPVESLREEIGI 187          
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Match: A0A8B8D9A8_CRAVI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D9A8_CRAVI)

HSP 1 Score: 171 bits (432), Expect = 3.400e-50
Identity = 79/144 (54.86%), Postives = 105/144 (72.92%), Query Frame = 0
Query:    1 ALPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLWHVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAKKYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAPL 144
            +LP+GTFGK Y NF+  N FSPD+R P+HFVDDP+L YVM RYR+VHDL+H + G+PP + GE+A+KW E +QTGLP+CALGA+FGPL L     +     Y+PWA+R GR   K L+ V++E+ WE  LE +R EL +E  P+
Sbjct:  136 SLPDGTFGKKYWNFLSKNGFSPDARLPIHFVDDPELKYVMLRYRQVHDLFHSVLGMPPHMLGEVAVKWVEALQTGLPMCALGALFGPLRLGPKHTKKYLDTYLPWAIRNGRNA-KFLMAVYWEEHWEDDLEKLRQELNIEPPPI 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23310.6282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK62_ECTSI3.880e-7668.02Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6T5QVX1_HETAK3.460e-5762.24Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A835Z0M6_9STRA4.270e-5661.97Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
W7U2W9_9STRA1.770e-5357.75Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6P7DUU8_SHEEP6.660e-5153.10Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7L2S160_9PASS8.080e-5155.07COQ4 protein (Fragment) n=5 Tax=Neognathae TaxID=8... [more]
UPI0005299C871.050e-5055.07ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
UPI000A2B54DB1.730e-5052.03ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A091H8Y5_BUCRH2.180e-5053.62Uncharacterized protein (Fragment) n=2 Tax=Buceros... [more]
A0A8B8D9A8_CRAVI3.400e-5054.86Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007715Ubiquinone biosynthesis protein Coq4PFAMPF05019Coq4coord: 2..143
e-value: 2.6E-61
score: 206.8
IPR007715Ubiquinone biosynthesis protein Coq4PANTHERPTHR12922UBIQUINONE BIOSYNTHESIS PROTEINcoord: 2..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23310contigH-paniculata_contig23310:398..1644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23310.6282.1mRNA_H-paniculata_contig23310.6282.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23310 398..1644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23310.6282.1 ID=prot_H-paniculata_contig23310.6282.1|Name=mRNA_H-paniculata_contig23310.6282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
ALPNGTFGKSYSNFMHGNKFSPDSRSPVHFVDDPDLAYVMRRYREVHDLW
HVLSGLPPTVEGELALKWFELVQTGLPVCALGAVFGPLALSQGSREMLAK
KYVPWALRAGRRVRKPLICVWYEKRWEQPLEAIRSELGMERAPLRRKEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007715Coq4