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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 599 |
| Cds size | 516 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23305.6278.1 >prot_H-paniculata_contig23305.6278.1 ID=prot_H-paniculata_contig23305.6278.1|Name=mRNA_H-paniculata_contig23305.6278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
MAAESGNVHEWASIVKVLREELSPEQVKEMHISHSARLLLVTADTDNGWR
CESLMNTVREELDPEQVKKISVSLGARLLRLAAKSGNVGAWENLVEVSQK
ELTAEQVKEILLSEGAIILRLVAESGQIGVWESVAKVLRENISPEQVQSI
PGQNYCSQRVVGLVVCDNSGR* back to topmRNA from alignment at H-paniculata_contig23305:2..1505- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig23305.6278.1 ID=mRNA_H-paniculata_contig23305.6278.1|Name=mRNA_H-paniculata_contig23305.6278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1504bp|location=Sequence derived from alignment at H-paniculata_contig23305:2..1505- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGGAGGTGCTTTTTTCGGAAGGTGCCACGGTGCTGGAAATGGCCGCGG
AAAGTGGGAACGTCCACGAATGGGCAAGCATAGTGAAAGTCTTGCGCGAG
GAGCTCAGCCCTGAACAGGTCAATAGTATTCTCGGACAAAGCGTCCCTGT
TCTCAGAGTAGAGTTATACCAAGTTGGTCGACCACCTTTTGTGCATCGAG
CGACATCGATAGCGGAGATGAAGCGAGGACATTTGCAGTATGCGTTTGAT
GGCGTGAATTGCATCACACCAAGGGGAAGGTTTCACCGTGTTTAGATATA
ATAGGTCTTATGGAACATGTGCTAGAGTCTCGGATTGACTAAGTTTTGTT
TGATGGCTTGTCGAGGTTCCCTTCCGCTTCTAGGCCACTCGCGCAGCGCA
AATCTCGGATGTGGTGGTGACCTGGTTTATGTTGCGTGTGGTTACTCCCA
GGTCAAGGAGATGCATATTTCGCATAGTGCGAGGTTGCTACTGGTGACCG
CGGACACTGACAACGGGTGGAGGTGCGAGAGCCTGATGAACACCGTGCGG
GAGGAGCTCGATCCCGAACAGGTCTGGATAGTCCCCGGGTAACACCCCTG
CTTTCAACACGGAATTGGCCGAGTGGTTTCGTCCGCCTCCTTCGCATTTT
GTGCAGTTTTATCTGTATGTGCTGTAGATGCTGGCAGCGGAAGTGACACG
AAGATGTTCGTGATATACGATTGCACGAATGTGATCGCACGGACGAGAAG
GCATCGCCGCGTTTGGTAGAGTGTTTCCCATGCGACATGGCTTATAATTC
AGGTTAGATTGACTCGTGTTGACCGCGTGTCATGGTTCATCTCCGTTTGA
ATGTGCCTACTCTCAGGTGAAGAAAATATCTGTTTCACTGGGTGCGAGGT
TGCTGCGATTGGCCGCGAAAAGTGGAAACGTTGGGGCGTGGGAGAATCTG
GTGGAAGTCTCGCAAAAAGAGCTCACTGCCGAACAGGTGCAAATTGTCTC
TAGCCAGCTTTACTGCTGCCGCAGGGAAGTGTATCTAGTTGTCAATCTTG
TGCATGTGTGCATTGGACGGCGTTAGCCGAGGCGATACGACGTCGTGCAA
TGATGTGAATGGAATCGCAGGAACAGGAAGGCGTCACCGAATTTATCTCA
CTCTATTGTTTGCGATACGTAGTTTAGTTTTGGCTGCCCACGGACCCGGC
GTTGTGGTTATGATGGTGCTCTAGTTAGTTCAAACCATCATGCGTGTCAT
GTGTTGCTTCCAGGTGAAGGAGATACTTCTCTCGGAAGGCGCGATTATAC
TGCGACTGGTCGCGGAAAGCGGTCAAATCGGAGTGTGGGAGAGTGTGGCA
AAAGTGTTGCGTGAGAACATCAGTCCCGAACAGGTGCAGAGTATCCCCGG
ACAGAACTATTGCTCTCAAAGAGTAGTCGGATTAGTTGTGTGTGATAATT
CTGGCCGGTAGGCCGCAGTGGTGGATGAACGTGTCTTATTATCCCAGGAG
AGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig23305:2..1505- >mRNA_H-paniculata_contig23305.6278.1 ID=mRNA_H-paniculata_contig23305.6278.1|Name=mRNA_H-paniculata_contig23305.6278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig23305:2..1505- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGCGGAAAGTGGGAACGTCCACGAATGGGCAAGCATAGTGAAAGT
CTTGCGCGAGGAGCTCAGCCCTGAACAGATGGCCGCGGAAAGTGGGAACG
TCCACGAATGGGCAAGCATAGTGAAAGTCTTGCGCGAGGAGCTCAGCCCT
GAACAGGTCAAGGAGATGCATATTTCGCATAGTGCGAGGTTGCTACTGGT
GACCGCGGACACTGACAACGGGTGGAGGTGCGAGAGCCTGATGAACACCG
TGCGGGAGGAGCTCGATCCCGAACAGGTCAAGGAGATGCATATTTCGCAT
AGTGCGAGGTTGCTACTGGTGACCGCGGACACTGACAACGGGTGGAGGTG
CGAGAGCCTGATGAACACCGTGCGGGAGGAGCTCGATCCCGAACAGGTGA
AGAAAATATCTGTTTCACTGGGTGCGAGGTTGCTGCGATTGGCCGCGAAA
AGTGGAAACGTTGGGGCGTGGGAGAATCTGGTGGAAGTCTCGCAAAAAGA
GCTCACTGCCGAACAGGTGAAGAAAATATCTGTTTCACTGGGTGCGAGGT
TGCTGCGATTGGCCGCGAAAAGTGGAAACGTTGGGGCGTGGGAGAATCTG
GTGGAAGTCTCGCAAAAAGAGCTCACTGCCGAACAGGTGAAGGAGATACT
TCTCTCGGAAGGCGCGATTATACTGCGACTGGTCGCGGAAAGCGGTCAAA
TCGGAGTGTGGGAGAGTGTGGCAAAAGTGTTGCGTGAGAACATCAGTCCC
GAACAGGTGCAGAGTATCCCCGGACAGAACTATTGCTCTCAAAGAGTAGT
CGGATTAGTTGTGTGTGATAATTCTGGCCGGTAGGTGAAGGAGATACTTC
TCTCGGAAGGCGCGATTATACTGCGACTGGTCGCGGAAAGCGGTCAAATC
GGAGTGTGGGAGAGTGTGGCAAAAGTGTTGCGTGAGAACATCAGTCCCGA
ACAGGTGCAGAGTATCCCCGGACAGAACTATTGCTCTCAAAGAGTAGTCG
GATTAGTTGTGTGTGATAATTCTGGCCGGTAG back to top
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