mRNA_H-paniculata_contig23301.6277.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig23301.6277.1
Unique NamemRNA_H-paniculata_contig23301.6277.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: D7FIW9_ECTSI (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW9_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.460e-32
Identity = 58/66 (87.88%), Postives = 64/66 (96.97%), Query Frame = 1 
Query:    1 MTELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVLL 198
            MTELMRDSL+ ARNL MDVFNALNL+QN+EFLQTLKFGIGDGHLQYYL+NWRCKE+TP+EVGLVLL
Sbjct:  349 MTELMRDSLVLARNLGMDVFNALNLMQNQEFLQTLKFGIGDGHLQYYLFNWRCKEITPQEVGLVLL 414
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: UPI0008523BA6 (glycylpeptide N-tetradecanoyltransferase-like n=2 Tax=Myrmicinae TaxID=34695 RepID=UPI0008523BA6)

HSP 1 Score: 97.8 bits (242), Expect = 4.390e-25
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVL 195
            ELM D+LI AR+L  DVFNAL+L+ NKEFL+ LKFGIGDG+LQYYLYNWRC  +TP ++GLVL
Sbjct:   37 ELMMDALISARDLGFDVFNALDLMDNKEFLEPLKFGIGDGNLQYYLYNWRCPSMTPGKIGLVL 99
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: A0A8J2HDT1_COTCN (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Cotesia congregata TaxID=51543 RepID=A0A8J2HDT1_COTCN)

HSP 1 Score: 98.6 bits (244), Expect = 1.100e-24
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVL 195
            ELM D+LI ARNL  DVFNAL+L+ NKEFL+ LKFGIGDG+LQYYLYNWRC  +TP ++GL L
Sbjct:   95 ELMTDALISARNLDFDVFNALDLMDNKEFLENLKFGIGDGNLQYYLYNWRCPSMTPNKIGLEL 157
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: A0A8J2WST0_9STRA (Glycylpeptide N-tetradecanoyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WST0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.480e-24
Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVLL 198
            ELMRD+LI ARN+ MDVFNALN+++N +FL+ LKFGIGDGHLQYYLYNW+C E+  E+VGLVLL
Sbjct:  399 ELMRDALICARNVQMDVFNALNVMENDQFLKDLKFGIGDGHLQYYLYNWKCAEMRAEDVGLVLL 462
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: UPI001CA965AE (glycylpeptide N-tetradecanoyltransferase 2 n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA965AE)

HSP 1 Score: 101 bits (252), Expect = 9.900e-24
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVL 195
            +LM D+LI ARNL  DVFNALNL+ NKEFL+ LKFGIGDG+LQYYLYNWRC  + PE++GLVL
Sbjct:  415 DLMTDALISARNLGFDVFNALNLMDNKEFLEPLKFGIGDGNLQYYLYNWRCPSIEPEKIGLVL 477
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: A0A7S3UMW5_HETAK (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMW5_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 1.060e-23
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVLL 198
            +LMR  LI+AR+  MDVFNAL+L+QN+ FLQ LKFGIGDGHLQYYLYNW+C +V P+ +GLVLL
Sbjct:  131 DLMRALLIKARDEGMDVFNALDLMQNQTFLQDLKFGIGDGHLQYYLYNWKCPKVEPQGIGLVLL 194
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: A0A835Z907_9STRA (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z907_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.090e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    1 MTELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVLL 198
            +T LMRD+L+ AR+  MDVFNALNL++N++FLQ L FGIGDGHLQYYLYNWRC  +TP E GLVLL
Sbjct:  376 LTALMRDALVLARDRGMDVFNALNLMENEQFLQDLLFGIGDGHLQYYLYNWRCAGMTPGETGLVLL 441
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: E0W1F9_PEDHC (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0W1F9_PEDHC)

HSP 1 Score: 100 bits (248), Expect = 1.260e-23
Identity = 43/64 (67.19%), Postives = 56/64 (87.50%), Query Frame = 1 
Query:    4 TELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVL 195
            T+L+ D+LI A+N+ +DVFNALN++ NKEFL+ LKFGIGDG+LQYYLYNWRC  + PE++GLVL
Sbjct:  290 TDLINDALISAKNMGLDVFNALNIMDNKEFLEPLKFGIGDGNLQYYLYNWRCPAILPEKIGLVL 353
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BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: UPI001C9D1526 (glycylpeptide N-tetradecanoyltransferase 1 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9D1526)

HSP 1 Score: 101 bits (251), Expect = 1.420e-23
Identity = 46/63 (73.02%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVL 195
            ELM D+LI ARNL  DVFNAL+L++NKEFL+TLKFGIGDG+LQYYLYNWRC  + P ++GLVL
Sbjct:  423 ELMTDALISARNLGFDVFNALDLMENKEFLETLKFGIGDGNLQYYLYNWRCPSMQPHKIGLVL 485
[Close]
BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Match: A0A1B6M6A3_9HEMI (Glycylpeptide N-tetradecanoyltransferase n=6 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6M6A3_9HEMI)

HSP 1 Score: 100 bits (250), Expect = 1.820e-23
Identity = 45/63 (71.43%), Postives = 56/63 (88.89%), Query Frame = 1 
Query:    7 ELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYNWRCKEVTPEEVGLVL 195
            +LM+D+LI A+N   DVFNAL+L++NKEFL+TLKFGIGDG+LQYYLYNWRC  VTP ++GLVL
Sbjct:  408 DLMQDALIAAKNAGFDVFNALDLMENKEFLETLKFGIGDGNLQYYLYNWRCPPVTPNKIGLVL 470
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23301.6277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIW9_ECTSI1.460e-3287.88Glycylpeptide N-tetradecanoyltransferase n=1 Tax=E... [more]
UPI0008523BA64.390e-2571.43glycylpeptide N-tetradecanoyltransferase-like n=2 ... [more]
A0A8J2HDT1_COTCN1.100e-2471.43Glycylpeptide N-tetradecanoyltransferase n=1 Tax=C... [more]
A0A8J2WST0_9STRA2.480e-2473.44Glycylpeptide N-tetradecanoyltransferase n=2 Tax=P... [more]
UPI001CA965AE9.900e-2473.02glycylpeptide N-tetradecanoyltransferase 2 n=1 Tax... [more]
A0A7S3UMW5_HETAK1.060e-2370.31Glycylpeptide N-tetradecanoyltransferase n=1 Tax=H... [more]
A0A835Z907_9STRA1.090e-2371.21Glycylpeptide N-tetradecanoyltransferase n=1 Tax=T... [more]
E0W1F9_PEDHC1.260e-2367.19Glycylpeptide N-tetradecanoyltransferase n=1 Tax=P... [more]
UPI001C9D15261.420e-2373.02glycylpeptide N-tetradecanoyltransferase 1 n=1 Tax... [more]
A0A1B6M6A3_9HEMI1.820e-2371.43Glycylpeptide N-tetradecanoyltransferase n=6 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23301contigH-paniculata_contig23301:2582..3590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.5
Seed ortholog evalue2.4e-27
Seed eggNOG ortholog2880.D7FIW9
Preferred nameNMT1
KEGG koko:K00671,ko:K02218
KEGG Pathwayko04011,ko04392,map04011,map04392
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004379,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006464,GO:0006497,GO:0006498,GO:0006499,GO:0006807,GO:0006810,GO:0006839,GO:0006996,GO:0007005,GO:0007006,GO:0007275,GO:0008150,GO:0008152,GO:0008277,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009966,GO:0009967,GO:0009987,GO:0010016,GO:0010064,GO:0010638,GO:0010646,GO:0010647,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0016020,GO:0016043,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018008,GO:0018193,GO:0018201,GO:0018377,GO:0019107,GO:0019538,GO:0019898,GO:0022400,GO:0023051,GO:0023056,GO:0031365,GO:0032101,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0042180,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046902,GO:0048367,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070201,GO:0071704,GO:0071840,GO:0071944,GO:0090559,GO:1900739,GO:1900740,GO:1901028,GO:1901030,GO:1901564,GO:1901566,GO:1901576,GO:1903747,GO:1903749,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1990904,GO:2001233,GO:2001235
EggNOG free text desc.Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins
EggNOG OGsCOG5092@1,KOG2779@2759
EC2.3.1.97,2.7.11.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons2
Model size201
Cds size201
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929659.7301548-CDS-H-paniculata_contig23301:2581..26831622929659.7301548-CDS-H-paniculata_contig23301:2581..2683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23301 2582..2683 -
1691480955.3994255-CDS-H-paniculata_contig23301:2581..26831691480955.3994255-CDS-H-paniculata_contig23301:2581..2683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23301 2582..2683 -
1622929659.7471821-CDS-H-paniculata_contig23301:3491..35901622929659.7471821-CDS-H-paniculata_contig23301:3491..3590Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23301 3492..3590 -
1691480955.416881-CDS-H-paniculata_contig23301:3491..35901691480955.416881-CDS-H-paniculata_contig23301:3491..3590Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23301 3492..3590 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23301.6277.1prot_H-paniculata_contig23301.6277.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig23301 2582..3590 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig23301.6277.1

>prot_H-paniculata_contig23301.6277.1 ID=prot_H-paniculata_contig23301.6277.1|Name=mRNA_H-paniculata_contig23301.6277.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MTELMRDSLIRARNLVMDVFNALNLIQNKEFLQTLKFGIGDGHLQYYLYN
WRCKEVTPEEVGLVLL*
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mRNA from alignment at H-paniculata_contig23301:2582..3590-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig23301.6277.1 ID=mRNA_H-paniculata_contig23301.6277.1|Name=mRNA_H-paniculata_contig23301.6277.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1009bp|location=Sequence derived from alignment at H-paniculata_contig23301:2582..3590- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGGAGTTAATGCGAGACAGCTTGATCCGGGCGCGCAACCTTGTCAT
GGACGTGTTTAACGCCCTGAATCTTATACAAAATAAGGAGTTCTTGCAGG
TGTGTAAATGCAAAATGACAATCATTCCGTTAACACCTGTCAAGATAAAA
ATTGACGAGTGCAGGTTAGCTCACAATAAGTGTTGTTACGATATATTGTT
CGGGCTTATGCAGTCATGTGTAAAATGCTGCACACTCTTGAAGTAACACA
CGGATATCACACTCGTTCCCGTCGGATGTCGTGATGTTCATTTTTTTCGT
TTCTTGGATTATGACCTAACGGTACGGTAACGAAAAGCCGCAGTATAAGT
ACGGTAATTACGGTACAACTTGGCGAGCGAGCGATATTAGGCGTGAACAG
ATCGCGGTAATAGAACGGTACTGAAATAGGGGCTCTATAGCCAAGTAAGC
GAAGGCGTCCTAAGGCGTTCGGTAACACGTCGTGGTAAGTGTCGTTTCGG
ATCAGTAGGGTATGCTTTTGTACTGTGATACTTTTACCTTGTCCAAGCTC
TGTCGTGATTACGGTGGCGCCTTGTTTTCTCGAAACGTGTTTGACACAGA
AGTCATCATCCAAGCTTTTCGTGGCAAAGCTGTGGCGTGGCCTAGCATAG
CTCCACCTGTTCCAATATTCCAATTATTTTCTAGTCGTGATGGGTATTTA
AATACCGAGTAAAAAGTTCCCAATCCGTGTATTTGTTATAGTGTTCAAGG
CTATGAGGTTCTCTATCATGGTAACTACCCAAAATGGATTAGTGAGTGCC
CAGTAACTGCTTGATTTGTTCTTCCTGACTTTTTTTTTTTTGTCACCATG
CTCCGCCACCGCGCTCTCGTGCTGCCGTCCCGGCCCGTTCCGTCGATTGT
CATGCAGACACTAAAGTTCGGGATCGGAGATGGTCACCTGCAGTATTATC
TGTACAACTGGCGATGCAAAGAAGTGACCCCAGAAGAGGTTGGATTGGTG
CTTCTTTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig23301:2582..3590-

>mRNA_H-paniculata_contig23301.6277.1 ID=mRNA_H-paniculata_contig23301.6277.1|Name=mRNA_H-paniculata_contig23301.6277.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at H-paniculata_contig23301:2582..3590- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGGAGTTAATGCGAGACAGCTTGATCCGGGCGCGCAACCTTGTCAT
GGACGTGTTTAACGCCCTGAATCTTATACAAAATAAGGAGTTCTTGCAGA
TGACGGAGTTAATGCGAGACAGCTTGATCCGGGCGCGCAACCTTGTCATG
GACGTGTTTAACGCCCTGAATCTTATACAAAATAAGGAGTTCTTGCAGAC
ACTAAAGTTCGGGATCGGAGATGGTCACCTGCAGTATTATCTGTACAACT
GGCGATGCAAAGAAGTGACCCCAGAAGAGGTTGGATTGGTGCTTCTTTAG
ACACTAAAGTTCGGGATCGGAGATGGTCACCTGCAGTATTATCTGTACAA
CTGGCGATGCAAAGAAGTGACCCCAGAAGAGGTTGGATTGGTGCTTCTTT
AG
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