prot_H-paniculata_contig23229.6258.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23229.6258.1
Unique Nameprot_H-paniculata_contig23229.6258.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length46
Homology
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: D8LJS6_ECTSI (Cystathionine gamma-lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJS6_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 9.520e-13
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKV 39
            SPQAAFYILQ+SKT+ LRF QQCKTAQAVAEMLESH KV
Sbjct:  248 SPQAAFYILQHSKTMGLRFRQQCKTAQAVAEMLESHEKV 286          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A836CFW8_9STRA (Cystathionine gamma-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.640e-10
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG 46
            SPQ +FY+LQ +KT+ LRF QQC TAQ VAE LE+HPKV  ++  G
Sbjct:  248 SPQCSFYVLQATKTMGLRFKQQCATAQKVAEFLETHPKVQTVHYPG 293          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A7S1Q2V1_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1Q2V1_NEODS)

HSP 1 Score: 53.9 bits (128), Expect = 3.720e-7
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKV 39
            SPQ AFY LQ +KTL LR  QQ   AQA+AE LE+HPKV
Sbjct:  259 SPQVAFYQLQTAKTLPLRIRQQSNNAQAIAEFLETHPKV 297          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A1S3Y2Y7_TOBAC (cystathionine gamma-synthase 1, chloroplastic-like n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Y2Y7_TOBAC)

HSP 1 Score: 53.9 bits (128), Expect = 3.730e-7
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG 46
            +P AA+ I++  KTL LR  QQ  TAQ +AE+LE+HPKV C+Y  G
Sbjct:  305 NPNAAYLIIRGMKTLHLRVQQQNSTAQRIAEILEAHPKVRCVYYPG 350          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: W8R7K4_TOBAC (Cystathionine gamma synthase n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=W8R7K4_TOBAC)

HSP 1 Score: 53.9 bits (128), Expect = 3.730e-7
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG 46
            +P AA+ I++  KTL LR  QQ  TAQ +AE+LE+HPKV C+Y  G
Sbjct:  378 NPNAAYLIIRGMKTLHLRVQQQNSTAQRIAEILEAHPKVRCVYYPG 423          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: Q9MT29_SOLTU (Cystathionine gamma-synthase isoform 2 n=6 Tax=Solanoideae TaxID=424551 RepID=Q9MT29_SOLTU)

HSP 1 Score: 53.9 bits (128), Expect = 3.730e-7
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG 46
            +P AA+ I++  KTL LR  QQ  TAQ +AE+LE+HPKV C+Y  G
Sbjct:  391 NPNAAYLIIRGMKTLHLRVQQQNSTAQRIAEILEAHPKVRCVYYPG 436          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A4D9BBN9_SALSN (Cystathionine gamma-synthase n=2 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BBN9_SALSN)

HSP 1 Score: 52.8 bits (125), Expect = 9.540e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG 46
            +P AA+ I++  KTL LR  QQ  TAQ +AE+LE+HPK+ C+Y  G
Sbjct:  390 NPNAAYLIIRGMKTLHLRVQQQNSTAQRMAEILEAHPKIRCVYYPG 435          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A7S3SGD3_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SGD3_9SPIT)

HSP 1 Score: 52.0 bits (123), Expect = 1.320e-6
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKV 39
            +P AAF ILQ +KT+ LR  QQ KTA A++E LESHPKV
Sbjct:   78 NPFAAFIILQTTKTMGLRVRQQSKTAMAISEFLESHPKV 116          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A1D3D3C7_9EIME (uncharacterized protein LOC34617715 n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A1D3D3C7_9EIME)

HSP 1 Score: 51.2 bits (121), Expect = 3.340e-6
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    2 PQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKV 39
            PQ AFY L +S TL LRF +Q +TA+AVAE L+ HPKV
Sbjct:  276 PQTAFYTLNSSMTLPLRFKRQSETAKAVAEFLQQHPKV 313          
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Match: A0A067JTE4_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JTE4_JATCU)

HSP 1 Score: 51.2 bits (121), Expect = 3.340e-6
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG 46
            +P AA+ I++  KTL LR  QQ  TA  +AE+LE+HPKV C+Y  G
Sbjct:  391 NPNAAYLIIRGMKTLHLRVQQQNSTAMRMAEVLEAHPKVRCVYYPG 436          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23229.6258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LJS6_ECTSI9.520e-1387.18Cystathionine gamma-lyase n=2 Tax=Ectocarpus TaxID... [more]
A0A836CFW8_9STRA9.640e-1060.87Cystathionine gamma-lyase n=1 Tax=Tribonema minus ... [more]
A0A7S1Q2V1_NEODS3.720e-766.67Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
A0A1S3Y2Y7_TOBAC3.730e-754.35cystathionine gamma-synthase 1, chloroplastic-like... [more]
W8R7K4_TOBAC3.730e-754.35Cystathionine gamma synthase n=1 Tax=Nicotiana tab... [more]
Q9MT29_SOLTU3.730e-754.35Cystathionine gamma-synthase isoform 2 n=6 Tax=Sol... [more]
A0A4D9BBN9_SALSN9.540e-752.17Cystathionine gamma-synthase n=2 Tax=Salvia splend... [more]
A0A7S3SGD3_9SPIT1.320e-664.10Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A1D3D3C7_9EIME3.340e-663.16uncharacterized protein LOC34617715 n=1 Tax=Cyclos... [more]
A0A067JTE4_JATCU3.340e-652.17Uncharacterized protein n=1 Tax=Jatropha curcas Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzymePFAMPF01053Cys_Met_Meta_PPcoord: 1..41
e-value: 2.9E-8
score: 32.6
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 13..46
e-value: 7.7E-7
score: 31.4
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23229contigH-paniculata_contig23229:3582..3719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23229.6258.1mRNA_H-paniculata_contig23229.6258.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23229 3582..3719 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23229.6258.1 ID=prot_H-paniculata_contig23229.6258.1|Name=mRNA_H-paniculata_contig23229.6258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
SPQAAFYILQNSKTLSLRFSQQCKTAQAVAEMLESHPKVCCLYVEG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
IPR015422PyrdxlP-dep_Trfase_dom1
IPR015424PyrdxlP-dep_Trfase