prot_H-paniculata_contig23225.6256.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23225.6256.1
Unique Nameprot_H-paniculata_contig23225.6256.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 3.390e-36
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0
Query:    8 FVVIAAALASTATATHVLTAQEKISAFNPEDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            FV+ A  ++ST  A+ V+TAQ++I+ FNPEDF F+LGGP  D L+DGFQ R VNVNQLPAL+GQGISMALVNLD CAINLPHIHPRATE
Sbjct:   10 FVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.620e-35
Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    8 FVVIAAALASTATATHVLTAQEKISAFNPEDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            FV+ A  + ST  A+ V+TAQ++I+ FNPEDF F+LGGP  D L+DGFQ R VNVNQLPAL+GQGISMALVNLD CAINLPHIHPRATE
Sbjct:   10 FVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.330e-30
Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 0
Query:    1 MKTSSTS---FVVIAAALASTATATHVLTAQEKISAFNPEDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            MKTS  S    VV A  ++STA A+ V+TAQ++I+ FNPEDF F LGGP  D  +DGFQ R   + Q+PAL+GQGI+MALVNLDAC INLPHIHPRATE
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATE 99          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 7.770e-30
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 0
Query:   10 VIAAALASTATATHVLTAQEKISAFNPEDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            VIAA L S      V+T Q++I+ +NPEDF F+LGGP  D L+DGFQ R   VNQLPAL+GQGISM LVNLD CAINLPHIHPRATE
Sbjct:   12 VIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATE 98          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A7S3EC99_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC99_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 5.460e-10
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   35 NPEDFAFALGG-PAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            N  DF F L G PA+DN + G + +G + ++ PAL G G+S  L  +D C +NLPH+HPRATE
Sbjct:   39 NASDFKFDLAGAPASDNGV-GAKIQGGSQSRFPALNGLGVSYTLFTIDPCGMNLPHVHPRATE 100          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A7S2ZJB7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJB7_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 2.100e-9
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   35 NPEDFAFALGG-PAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            N  DF F L G PA+DN + G + +G + ++ PAL G G+S  L  +D C +NLPH+HPRATE
Sbjct:   39 NASDFKFDLAGAPASDNGV-GAKIQGGSQSRFPALNGLGVSYTLFTIDPCGMNLPHVHPRATE 100          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A7S0G545_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G545_9RHOD)

HSP 1 Score: 59.7 bits (143), Expect = 2.260e-9
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   37 EDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            +DF F L G  A N   G + +G +  + PAL G G+S  L  +D C +NLPH+HPRATE
Sbjct:   24 KDFKFNLAGAPASNNGVGAKIQGGSQARFPALNGLGVSYTLFTIDPCGMNLPHVHPRATE 83          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A0G4IUK5_PLABS (Cupin type-1 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUK5_PLABS)

HSP 1 Score: 60.5 bits (145), Expect = 6.510e-9
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0
Query:   35 NPEDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            NP+ F +    P       G   R   + +LP L G GI+++LV+L ACAIN PHIHPRATE
Sbjct:   44 NPDQFFYDFSKPVKITQGPGGSLRTCGIEELPTLAGMGIAVSLVDLKACAINNPHIHPRATE 105          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A7S0G8V0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8V0_9RHOD)

HSP 1 Score: 55.1 bits (131), Expect = 1.970e-7
Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = 0
Query:   35 NPEDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            N EDF F L   AA N   G   +  + ++ PAL G G+   L  L+ C +NLPH+HPRATE
Sbjct:   39 NAEDFKFNLFEAAAANNGAGAMIQAGSQSRFPALNGLGLCYFLFTLEPCGMNLPHVHPRATE 100          
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Match: A0A7S2ZX28_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZX28_9RHOD)

HSP 1 Score: 54.7 bits (130), Expect = 4.360e-7
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   23 HVLTAQEKISAFNP--EDFAFALGGPAADNLMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE 96
            H LTA EK    +P   DF F L   +A +   G + +   V+Q  AL+G  IS ++  LD C +NLPH+HPRATE
Sbjct:   25 HPLTALEKRIDDHPYDTDFIFHLANVSASDNGVGAKVKAGAVDQFHALDGLRISNSMFTLDPCGMNLPHVHPRATE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23225.6256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FIJ3_ECTSI3.390e-3671.91Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
D7FI68_ECTSI1.620e-3571.91Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
D8LDW6_ECTSI2.330e-3063.64Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV79_9PHAE7.770e-3067.82Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
A0A7S3EC99_9RHOD5.460e-1049.21Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZJB7_9RHOD2.100e-949.21Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G545_9RHOD2.260e-946.67Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A0G4IUK5_PLABS6.510e-946.77Cupin type-1 domain-containing protein n=1 Tax=Pla... [more]
A0A7S0G8V0_9RHOD1.970e-745.16Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZX28_9RHOD4.360e-743.42Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 6..96
e-value: 4.3E-15
score: 57.7
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 45..96
e-value: 8.0E-8
score: 32.0
NoneNo IPR availablePANTHERPTHR31238:SF14GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATEDcoord: 15..96
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 15..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.731
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 57..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23225contigH-paniculata_contig23225:603..1314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23225.6256.1mRNA_H-paniculata_contig23225.6256.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23225 603..1314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23225.6256.1 ID=prot_H-paniculata_contig23225.6256.1|Name=mRNA_H-paniculata_contig23225.6256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
MKTSSTSFVVIAAALASTATATHVLTAQEKISAFNPEDFAFALGGPAADN
LMDGFQFRGVNVNQLPALEGQGISMALVNLDACAINLPHIHPRATE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf