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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1570 |
| Cds size | 981 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23197.6243.1 >prot_H-paniculata_contig23197.6243.1 ID=prot_H-paniculata_contig23197.6243.1|Name=mRNA_H-paniculata_contig23197.6243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
MGKGQVTIFGIDPVYENVQFVVGPLATVVFVGRTILFERGEGSTEPIFIV
EGDGVLSFDMGGSRDIKKKGRVVDKSALVKSPRGSFGLTNGAQAYATDTF
LSVQRSRRPHGTELPESTHEAIAYSSTNKLGPRDAPLKVGDYLSSACNIS
TDGDDDVLVEGVCSAMPAFVPRAGSGGVCVWPTDEGTLRITRGHEPDASQ
EPLVEVGGTSGGGRAYPKGWFGGGGNAESLTTGSAEKIATETSVRRGQLE
VAKVNDVCFWGVCVKRKEVLYRSERPKGWWRVFVAPFNKRGREIRDAECV
VSPDEHVAMQTTSGEVLTVLWGPALD* back to topmRNA from alignment at H-paniculata_contig23197:785..4023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig23197.6243.1 ID=mRNA_H-paniculata_contig23197.6243.1|Name=mRNA_H-paniculata_contig23197.6243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3239bp|location=Sequence derived from alignment at H-paniculata_contig23197:785..4023- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGCTTCATGGGCAAAGGACAGGTTACGATCTTTGGGATAGATCCAGTCT
ACGAAAACGTGCAATTCGTGGTCGGGCCTCTGGCGACAGTCGTATTCGTG
GGCCGTACAATCCTGTTCGAGCGCGGCGAGGTCAGTTGAACGAATCCATA
GTACACTTGACTTGTAGAAAAGTCGCAACTCGTTTTTGTTCATTGTGGCT
CTAGGCCCGCTGTGTCGTGATGTATCTCTTGGGTTGCCGTAGCCAGGCTC
TCGTTCGGTGATGATAATGAACGTCTAGCACGTACCTGTGTGACAAGGTA
TATTATGTGTTCTGATGGCCGCCACGGAGCTTTCTGGTTTCATGCATATG
TGCTATGCACTTTTATGCAAGGCGAGAAAACGGCGGTCACTCGCAGCCAT
GAGAGGTCGATGTTATTCCAAGTGTGAGCAACTGGCGTTCCAGGATTCGA
GGTTGGGTTTTCGCCCCGTTCCACCACGCGTGTCTGTGTGCAAGACGTGA
TGGGACAGCGGTGAGCTGTACTGTACAAATTTCCTGCTTTGCCCCGCTCG
CTAAACTGGTTGTGCAACACGCTCCAACGATCCCACGACTGTTCGCCGCT
GACTTGGAAAGCCTACAGCGTAGTAGTGGTGGGTACAGGAAACAATCGAA
TCGCCGTGGTATTTTTGCTCCCGTTCCAGGACGCCGAAGTTGGCTAGGCG
TGTCCTCTCACTCCCCCGCCTGCCCCACAACGTTCCTGTGCTACTACATG
TAATACAGGGGTCAACCGAGCCGATATTCATCGTAGAAGGTGACGGTGTT
CTATCTTTCGATATGGGTGGAAGCCGCGACATCAAGAAGAAAGGCAGAGT
GGTGAGAAAACACGGTAGTTGATGTGTTTCCGAATTGGTCCCATGTCGTG
TGTTGTTCGAGAATGTGGTATTTTTCTTTTCGTCGTTTCGAGATTCATGA
AAAATATCCTCTTGCATTCCCCGTGAGAGAGGTTGTGTCAACGGCTTGGT
TTTCGGTGGATGTGACGAAGAACCCTTGTGGTGCACTGGTCGTACTAGTT
GACTGATTGGTTGTGAAGTACGACATGTTGGTGTGCTTTCGCATGTGTTG
GGTGAGGGTGGGTGTTGCTGGTAGTGTGCAGTTATTTGTGTCGATACACT
GGCGATCGGCTGTTCGCCACCGTGGCACTTTAGTGTTGCAAATGATGGGA
GTTTCGGCTTAGAGCTGGCTGATGAATTGCTACAGTATCTACGCACACAC
GTACATTGGGCATATCATGGCAAATAGCTGCTGTATTCCTGTCTGGAGTC
GCCCCAATGCTAACCCGCACCGTCCCCCTTTTTACCGCTCTTTTCCGTTC
CGTTCCATCGCGACCTTACTGTTGCCTCAGGTAGACAAAAGCGCTCTGGT
GAAGTCGCCGAGAGGCTCCTTTGGCTTGACCAACGGAGCCCAAGCATACG
CCACGGATACCTTCCTATCCGTGCAACGCTCACGGCGGCCGCATGGCACT
GAACTGCCTGAGTCGACCCATGTACGTTTCGCCGCTAACCTTGCATGTAG
GCACACTGCCCACCCATCAAACTCATGGACGTCAGATGGGTGAGGACCAG
AACAACACCATTTCATCTTCTAGAAACACCAGACATGAGAAGATTTGGAA
GATATACTTCGCAGTTTCGATATTTCGCACGTCACCCGAATTGTGTGGTT
TTTAATTATTTTTCATTTACACTACTGACAGGAAGCTATCGCCTACTCGT
CGACGAACAAGCTCGGTCCTCGTGACGCTCCCTTGAAGGTAGGCGACTAC
CTGAGCAGCGCTTGCAACATCAGCACCGACGGAGACGACGATGTTCTCGT
CGAGGGAGTGTGCAGCGCAATGCCGGCGTTCGTTCCTCGTGCCGGTAGCG
GAGGCGTATGCGTGTGGCCCACCGACGAGGGCACCCTTCGCATCACGAGA
GGCCACGAACCCGATGCTTCCCAAGAGCCTCTCGTGGAAGTCGGAGGGAC
TTCGGGAGGCGGAAGGGCGTACCCCAAGGGCTGGTTCGGCGGTGGCGGCA
ATGCGGAAAGCTTGACGACGGGAAGCGCAGAGAAGATCGCGACTGAGGTA
AGTGCTTCAAATTCTCAAGAGACGCCAGGTGATGGTGTATAGTTTCTGGC
TGTCGGGGCAGAGACAAAGCTTTGAGGACTTGGTTTCCCTTGGTTGTTTT
TTGCTGCGGTTCGAAGGAACCCCATTTCTTATGCTCGGGATGAAATACGA
ACGCTTTCCCCCCCTACGAACACCTTTGCATGTGTTTTCTTTAATGTCGG
GTCTTTCCCCATGATATGATAGTGAGCATATGCATGATACAAGTATGTAC
TGTACGTGAGACCCTTGCCCCCCTTCCCCTCGATCGCTGTTCAATGCAGA
CATCTGTGCGCAGGGGACAGTTGGAAGTGGCGAAGGTCAACGACGTGTGT
TTCTGGGGCGTTTGCGTCAAGAGGAAGGAAGTGCTCTACCGGTCCGAAAG
ACCGAAGGGCTGGTGGAGGGTGTTCGTTGCCCCCTTCAACAAGCGCGGAC
GAGAGATCCGAGATGCCGAGTGCGTCGTTTCGCCGGATGAGCACGTAGCA
ATGCAGACCACGAGCGGCGAAGTTCTTACGGTCCTGTGGGGTCCCGCGCT
TGATTGAGACTTTGTAGAGGGTGATGAATAGTGGCAAGATGAGAGCCAAA
CGGAGGCGCCGAAGTATATTTTAGTTCACAGTGGTTAGTCCCTGCAGCAT
AATGTTTAATGTCAGTAGTTTAGTCATTATTTTCGGCGGCATGTTTTTGC
TGTATTATTGGGAGCTTTCCCCTTGGCCGTCAGTCGCAAGAAAGCCGTGG
TCAAGGCGTGCCTTTTTTTCTGGCGTTTTTGTACAGGTACATTGGAAGTG
TGGTGCTGAGGGTGACTTCTTCGGTAGACAGCGAGCCCATTTGAGATTCG
ATCCTGAGCGGAGGATAGTCTTGGTTACTTTCACCCCAAAGCCTGGGTGA
TCGATGATTTTTCATCGGTCGTCCATGCTAGGAATCTTGCTTTCTCTGAG
GCGGCTAGTTTTCATCCAATTTGGTCCAATTGATCAAGTCCCACACTCTC
CACTTCTCTCGCTGGATGCTGGTCCCCGTTTCCACCTTGGAAGAGGTGGC
ATTTGAGACTTGTGGCCCACTACAACATGGGGCATGTTCACTCGTATTTT
ATGCGGTAGAGTGGACCAAGTTGCAAACCTCTAAGAACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig23197:785..4023- >mRNA_H-paniculata_contig23197.6243.1 ID=mRNA_H-paniculata_contig23197.6243.1|Name=mRNA_H-paniculata_contig23197.6243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig23197:785..4023- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCAAAGGACAGGTTACGATCTTTGGGATAGATCCAGTCTACGAAAA
CGTGCAATTCGTGGTCGGGCCTCTGGCGACAGTCGTATTCGTGGGCCGTA
CAATCCTGTTCGAGCGCGGCGAGATGGGCAAAGGACAGGTTACGATCTTT
GGGATAGATCCAGTCTACGAAAACGTGCAATTCGTGGTCGGGCCTCTGGC
GACAGTCGTATTCGTGGGCCGTACAATCCTGTTCGAGCGCGGCGAGGGGT
CAACCGAGCCGATATTCATCGTAGAAGGTGACGGTGTTCTATCTTTCGAT
ATGGGTGGAAGCCGCGACATCAAGAAGAAAGGCAGAGTGGGGTCAACCGA
GCCGATATTCATCGTAGAAGGTGACGGTGTTCTATCTTTCGATATGGGTG
GAAGCCGCGACATCAAGAAGAAAGGCAGAGTGGTAGACAAAAGCGCTCTG
GTGAAGTCGCCGAGAGGCTCCTTTGGCTTGACCAACGGAGCCCAAGCATA
CGCCACGGATACCTTCCTATCCGTGCAACGCTCACGGCGGCCGCATGGCA
CTGAACTGCCTGAGTCGACCCATGTAGACAAAAGCGCTCTGGTGAAGTCG
CCGAGAGGCTCCTTTGGCTTGACCAACGGAGCCCAAGCATACGCCACGGA
TACCTTCCTATCCGTGCAACGCTCACGGCGGCCGCATGGCACTGAACTGC
CTGAGTCGACCCATGAAGCTATCGCCTACTCGTCGACGAACAAGCTCGGT
CCTCGTGACGCTCCCTTGAAGGTAGGCGACTACCTGAGCAGCGCTTGCAA
CATCAGCACCGACGGAGACGACGATGTTCTCGTCGAGGGAGTGTGCAGCG
CAATGCCGGCGTTCGTTCCTCGTGCCGGTAGCGGAGGCGTATGCGTGTGG
CCCACCGACGAGGGCACCCTTCGCATCACGAGAGGCCACGAACCCGATGC
TTCCCAAGAGCCTCTCGTGGAAGTCGGAGGGACTTCGGGAGGCGGAAGGG
CGTACCCCAAGGGCTGGTTCGGCGGTGGCGGCAATGCGGAAAGCTTGACG
ACGGGAAGCGCAGAGAAGATCGCGACTGAGGAAGCTATCGCCTACTCGTC
GACGAACAAGCTCGGTCCTCGTGACGCTCCCTTGAAGGTAGGCGACTACC
TGAGCAGCGCTTGCAACATCAGCACCGACGGAGACGACGATGTTCTCGTC
GAGGGAGTGTGCAGCGCAATGCCGGCGTTCGTTCCTCGTGCCGGTAGCGG
AGGCGTATGCGTGTGGCCCACCGACGAGGGCACCCTTCGCATCACGAGAG
GCCACGAACCCGATGCTTCCCAAGAGCCTCTCGTGGAAGTCGGAGGGACT
TCGGGAGGCGGAAGGGCGTACCCCAAGGGCTGGTTCGGCGGTGGCGGCAA
TGCGGAAAGCTTGACGACGGGAAGCGCAGAGAAGATCGCGACTGAGACAT
CTGTGCGCAGGGGACAGTTGGAAGTGGCGAAGGTCAACGACGTGTGTTTC
TGGGGCGTTTGCGTCAAGAGGAAGGAAGTGCTCTACCGGTCCGAAAGACC
GAAGGGCTGGTGGAGGGTGTTCGTTGCCCCCTTCAACAAGCGCGGACGAG
AGATCCGAGATGCCGAGTGCGTCGTTTCGCCGGATGAGCACGTAGCAATG
CAGACCACGAGCGGCGAAGTTCTTACGGTCCTGTGGGGTCCCGCGCTTGA
TTGAACATCTGTGCGCAGGGGACAGTTGGAAGTGGCGAAGGTCAACGACG
TGTGTTTCTGGGGCGTTTGCGTCAAGAGGAAGGAAGTGCTCTACCGGTCC
GAAAGACCGAAGGGCTGGTGGAGGGTGTTCGTTGCCCCCTTCAACAAGCG
CGGACGAGAGATCCGAGATGCCGAGTGCGTCGTTTCGCCGGATGAGCACG
TAGCAATGCAGACCACGAGCGGCGAAGTTCTTACGGTCCTGTGGGGTCCC
GCGCTTGATTGA back to top
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