mRNA_H-paniculata_contig2315.6231.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A6H5L9L6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9L6_9PHAE) HSP 1 Score: 379 bits (974), Expect = 5.640e-118 Identity = 272/678 (40.12%), Postives = 345/678 (50.88%), Query Frame = 1
Query: 493 GGSISPEH---WKVLYRAFLLRVHPDFFHDLPEERSVNEKNLQALSMHLGERDHTAIPRSGRLHG---SMDSGGARLVFFLKATTTESSAIATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAAPAQAFEYDGGDXXXXXXGSNRVNRRRNGAVDHDSRISSNINGDITATTSPDYCSNGAGYGALLAPPKKVMLPLQSHRTSTKLELMHLLRAAGVTLPPEISMTPPPPARPPHRSHLHEQESTTATTPFGWDEEDNWAGM-DDLFGGT-----W---SGSRSSSRFYGASDPYQNRRYDGESAQERRRAEGGGPSATAG----LGFVLETEAGRTLVRERRRSTRNVRRLVEELREQYGFGEFSFRCGWSKSNLCVALESLLNACATHRQAFSVPNFGGLGIVFRNDPSFLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEAPQYARGEVEEG---AELAQGDWSQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAG-VTLAQMVVACEALAS-ALCPDTGGXXXXXXXXXXXXXXXXXVRRRLRGHCVVIVGERHGDVDGVTENGEIAIRWDYWE 2454
G + SPE WK +YRAFLL VHPDFFH+ P++R+VNEK+L++LS HL +R RSG +H + + + LVFFLK E + +D +P++ KVMLPL SH HL + +S PPPA ++ S+ D W G DDLFGGT W + R+ SR + + ++R G +G LG +L T+ GR LVRERR S+R VRRLV ELREQYGFGEF+FRCGWSKSNLCVAL SL+ C R F V +FGGL +VFRNDPS L+ GEIRL P+DVP +WVS L+ VT LS E+Q+RE+ L+ AS LRGA +SRGLSCSKSRYR+FLS + AA + G+ G A+L +GDWS + C+VEEGF R STVLEDGTIQ+G+DM L T+ RCL RD SSA + E LA AA+ A+RCR+ LGLESI R+ V ++MV+ACEAL + +GG RRRLRGHCV +VG R G DGVTE+GEI + W++WE
Sbjct: 47 GRTTSPEQHQEWKSVYRAFLLHVHPDFFHESPKKRAVNEKSLKSLSQHL-DRLGGEDTRSGGVHSRSNAANGSASPLVFFLKQAGDEGAG-----------------------------------SKSDGSPSRG---------------------------------------------------------------KVMLPLGSHHQMAT----HLYDSG-------MSGVSPPPAHA-EQASTRRHHSSRPVDSSNNDNPSRWHGWEDDLFGGTAANRAWDEAAAGRNGSRDTHGRSAFSSDDDKTREGRQRTTEWGAAFERRSGHASWLGQILSTDEGRALVRERRSSSRKVRRLVGELREQYGFGEFTFRCGWSKSNLCVALGSLVETCRARRGEFLVNDFGGLEVVFRNDPSVLHKGEIRLCPSDVPNQWVSALRRVTPAVLSAAEEQSREMISLQERASRALRGARLSRGLSCSKSRYRDFLSKVCAAADAEPDEGDGGGGDAAADLVKGDWSDLMCRVEEGFRRASTVLEDGTIQVGSDMTLKTLRRCLGRDSDSSSAATAEYLELAVAAAATAERCRQALGLESIKRSRHTVGNSEMVMACEALVRFSERAKSGGDLRAEKEAVA-------ARRRLRGHCVRVVGSRVGVCDGVTEDGEIVLPWNWWE 606
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A662YBB6_9STRA (DUF4461 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBB6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.330e-15 Identity = 83/284 (29.23%), Postives = 130/284 (45.77%), Query Frame = 1
Query: 1474 RERRRSTRNVRRLVEELREQYGFGEFSFRCGWS----KSNLCVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLW---AAEAPQYARGEVEEGAELAQGDWSQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAA-----KRCREHLGLESIDRAAGVTLAQMVVACEALASAL 2274
++R+ + ++++ + L+ + G + CGWS +++ V L L H+Q P G I ++PS F N I L+PADVPL+WV VL+ + + + ++ L L++ A+A L A ++RG +CS YR FL + A+ A Y E QG ++ VE+G VLE G +Q +D + V +F + SQ+ A AA+ A RC LG SI G+ LA +VACE L A+
Sbjct: 260 KQRQIAWQSIQSVKRTLKRELGVEDVLTSCGWSTMHLNTSIMVLLHILRQYTRAHKQGIFTPKDFLRGATIDISSNPSGIDFANEYRIGLNPADVPLQWVEVLETIDADMVVFMKAARESLEALQSNATAALGEAHITRGFTCSALGYRAFLQSMRSHNASFAADYGHSE--------QGLLEKLSLVVEDG-SYDWMVLETGHVQAPSDSSYEDV-----TEFLRKNRPRIRSQQAAHAANLEAFAFISSRCAHTLGATSITCGDGIPLADAIVACEELLKAV 529
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A6A3KLI4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KLI4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.430e-13 Identity = 79/300 (26.33%), Postives = 134/300 (44.67%), Query Frame = 1
Query: 1432 LGFVLETEAGRTLVRERRRSTRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEA--PQYARGEVEEGAELAQGD---W-----SQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAGVTLAQMVVACEALASAL 2274
L F+ E E T R RR + +++ + L+ + G + F CGWS +L + L++L ++Q P G I +PS F N I L+PADVP++WV VL+ + + + ++ L L+A+A++ L A++SRG +CS YR FL + +A P +G +E+ A + + D W ++R +G + L I T + LA A + + RC + + L++I R G+ + + +VACE L A+
Sbjct: 188 LEFMKEDETMETQQR-RRIAWESIQSVRNTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRMNKQGIFTPKDFLRGATIDLSANPSGIDFSNEYRIGLNPADVPVQWVQVLETIDADMVVFMKATRESLATLQADATSALGEANISRGHTCSALGYRTFLQSMRRRDAGDPNNEQGILEKLALVIEDDSYEWVVLETGEVRAPCTSSYGEALSFLSKNRSLIRRQQ-------------------ETHNANLA-AFAYVSSRCADAMHLKAITRDEGIPVGEAIVACEELLKAV 466
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A662X3P7_9STRA (DUF4461 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3P7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.060e-13 Identity = 76/280 (27.14%), Postives = 125/280 (44.64%), Query Frame = 1
Query: 1474 RERRRSTRNVRRLVEELREQYGFGEFSFRCGWS----KSNLCVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWA---AEAPQYARGEVEEGAELAQGDWSQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAA-----KRCREHLGLESIDRAAGVTLAQMVVACEAL 2262
++R+ + ++++ + L+ + G + CGWS +++ V L L H+Q P G I ++PS F N I L+PADVPL+WV VL+ + + + ++ L L++ A+A L A ++RG +CS YR FL + + + A Y QG ++ +E+G +LE G +Q +D + V +F + SQ+ AA+ A RC LG I G+ LA +VACE L
Sbjct: 264 KQRQIAWQSIQSVKRTLKRELGIEDVLTSCGWSTMHLNTSIMVLLHILRQYTRAHKQGIFTPKDFLRGATIDISSNPSGIDFANEYRIGLNPADVPLQWVEVLETIDADMVVFMKAARESLEVLQSNATAALGEAHITRGFTCSALGYRTFLQSMRSHNSSSAADYGHNR--------QGLLEKLALVIEDG-SYDWMILETGHVQAPSDSSFEDV-----TEFLRKNRPRIRSQQAVHAANLEAFAFISARCAHTLGATGITCGDGIPLADAIVACEEL 529
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: W2RD74_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RD74_PHYPN) HSP 1 Score: 81.3 bits (199), Expect = 2.970e-12 Identity = 76/287 (26.48%), Postives = 127/287 (44.25%), Query Frame = 1
Query: 1471 VRERRR-STRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEAPQYARGEVEEGAELA----QGDW-----SQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAGVTLAQMVVACEALASAL 2274
+++RRR + ++++ + L+ + G + F CGWS +L + L++L ++Q P G I +PS F N I L+PADVP++W+ VL+ + + ++ L L+ +A+A L A++SRG +CS YR FL + +A + + E L DW ++R +G V T L QI T + L EA + + RC + + ++SI R G+ LA +VACE L A+
Sbjct: 205 IQQRRRIAWQSIQSVRGTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRANKQGIFTPKDFLHGATIDISANPSGIDFSNEYRIVLNPADVPVQWIQVLETIDANMVLFMKAARESLKSLQTDATAALGEANISRGHTCSAIGYRAFLQRMRQRDAAYDSEQGLMEKFTLVIEDESYDWRVLETGEVRAPFTSSYGEVVTFLSRNRSQIRRQQ-------------------ETHTANL-EAFAYISSRCVDAMYVKSITRDEGIPLADAIVACEELLKAV 471
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A0W8C9T8_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C9T8_PHYNI) HSP 1 Score: 81.3 bits (199), Expect = 4.820e-12 Identity = 76/287 (26.48%), Postives = 127/287 (44.25%), Query Frame = 1
Query: 1471 VRERRR-STRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEAPQYARGEVEEGAELA----QGDW-----SQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAGVTLAQMVVACEALASAL 2274
+++RRR + ++++ + L+ + G + F CGWS +L + L++L ++Q P G I +PS F N I L+PADVP++W+ VL+ + + ++ L L+ +A+A L A++SRG +CS YR FL + +A + + E L DW ++R +G V T L QI T + L EA + + RC + + ++SI R G+ LA +VACE L A+
Sbjct: 205 IQQRRRIAWQSIQSVRGTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRANKQGIFTPKDFLHGATIDISANPSGIDFSNEYRIVLNPADVPVQWIQVLETIDANMVLFMKAARESLKSLQTDATAALGEANISRGHTCSALGYRAFLQRMRQRDAAYDSEQGLMEKFTLVIEDESYDWRVLETGEVRAPFTSSYGEVVTFLSRNRSQIRRQQ-------------------ETHTANL-EAFAYISSRCVDAMYVKSITRDEGIPLADAIVACEELLKAV 471
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A2P4X8H3_9STRA (Mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8H3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.470e-11 Identity = 77/296 (26.01%), Postives = 130/296 (43.92%), Query Frame = 1
Query: 1432 LGFVLETEAGRTLVRERRRSTRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEAP-QYARGEVEEG----AELAQGDW-----SQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAGVTLAQMVVACEAL 2262
L F+ E E + + R+ + ++++ + L+ + G + F CGWS +L + L++L ++Q P G I +PS F N I L+PADVP++WV VL+ + + ++ L L+ +A+A L A++SRG +CS YR FL + AP Q+ E+ E E A +W ++R +G T L QI AH++ + E + A RC + + +++I G+ +A +VACE L
Sbjct: 168 LEFMKEDET-MEIQKRRQIAWQSIQSVRGTLKRELGLEDVLFSCGWSTMHLNTTIMILLQTLRKYTRANKQGIFAPKDFLRGATIDISANPSGIDFSNEYRIGLNPADVPVQWVQVLETIDANMVLFMKAARESLASLQTDATAALGHANISRGHTCSALGYRTFLQNMRQRGAPTQHGEQELLEKYTVVIEDASYEWRILETGKVRVPFTSSYGEAVTFLNKNRSQIRRQQE------------AHNANL--------EVFAYIASRCTDAMHIKTITCDDGIPVADAIVACEEL 442
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A329SB38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SB38_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.800e-11 Identity = 75/283 (26.50%), Postives = 125/283 (44.17%), Query Frame = 1
Query: 1480 RRRSTRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQA-FSVPNF-GGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEAPQYARGEVEEGAELA----QGDW-----SQIRCKVEEGFGRVSTVLEDGTIQIGTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAGVTLAQMVVACEALASAL 2274
RR + ++++ + L+ + G + + CGWS +L + L++L ++Q FS +F G I +PS F N I L+PADVP++WV VL+ + + ++ L L+ +A+A L A++SRG +CS YR FL + +A + E L DW ++R +G T L QI AH++ + EA + + RC + + + SI R G+ +A +VACE L A+
Sbjct: 210 RRIAWQSIQSVRGTLKRELGLEDMLYSCGWSTMHLNTTAMILLQTLRKYARANKQGIFSPKDFLRGATIDISANPSGIDFSNEYRIELNPADVPVQWVQVLETIDANMVLFMKAARESLISLQTDATAALGEANISRGHTCSALGYRTFLQSMEQRDAAYDNESGLLEKFTLVIEDESYDWRVLETGEVRAPFTSSYGEAVTFLSRNRSQIRRQQE------------AHNANL--------EAFAYISSRCADTMHVTSITRDEGIPVADAIVACEELLKAV 472
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: A0A6A3SEK8_9STRA (DUF4461 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3SEK8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.520e-11 Identity = 62/221 (28.05%), Postives = 105/221 (47.51%), Query Frame = 1
Query: 1432 LGFVLETEAGRTLVRERRRSTRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPS---FLNNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEA--PQYARGEVEEGAELAQGD---W-----SQIRCKVEEGFGRVSTVL 2037
L F+ E E T R RR + +++ + L+ + G + F CGWS +L + L++L ++Q P G I +PS F N I L+PADVP++WV VL+ + + + ++ L L+A+A++ L A++SRG +CS YR FL + +A P +G +E+ A + + D W ++R +G + L
Sbjct: 140 LEFMKEDETMETQQR-RRIAWESIQSVRNTLKRELGLEDVLFSCGWSTMHLNTTAMILLQTLRKYTRANKQGIFTPKDFLRGATIDLSANPSGIDFSNAYRIGLNPADVPVQWVQVLETIDADMVVFMKATRESLATLQADATSALGEANISRGHTCSALGYRTFLQSMRRRDAGDPNNEQGILEKLALVIEDDSYEWVVLETGEVRAPCTSSYGEALSFL 359
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Match: G4Z057_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z057_PHYSP) HSP 1 Score: 73.2 bits (178), Expect = 8.820e-10 Identity = 78/296 (26.35%), Postives = 130/296 (43.92%), Query Frame = 1
Query: 1432 LGFVLETEAGRTLVRERRRSTRNVRRLVEELREQYGFGEFSFRCGWSKSNL----CVALESLLNACATHRQAFSVPN--FGGLGIVFRNDPSFL---NNGEIRLSPADVPLEWVSVLQGVTVEYLSVVEDQARELGHLEAEASAILRGASVSRGLSCSKSRYREFLSGLWAAEAPQYARGEVEEGAELAQGDWSQIRCKVEEGFGRVSTVLEDGTIQI------GTDMALATVWRCLDRDFAHSSAVSTESQRLAEAASRAAKRCREHLGLESIDRAAGVTLAQMVVACEALASAL 2274
L F+ E E R+R + +++ L+ + + F CGWS +L + L++L ++Q P G I +PS + N I L+PADVP++WV VL+ + + ++ L L+A+A+A L A++SRG +CS YR FL + +A G QG + +E+ VLE G ++ G ++ + R L R T + L EA + + RC + + +++I R G+ + VVACE L A+
Sbjct: 136 LEFMKEEETMEAQQRQRI-AWESIQSAKNTLKRELDLQDVLFSCGWSTMHLNTTVMILLQTLRKYSRANKQGIFTPKDFLRGATIDLSANPSGIDLSNEYRIVLNPADVPVQWVQVLETIDANMVVFMKAAQESLATLQADATAALGEANISRGHTCSALGYRTFLQSMRQRDAA---------GQSSEQGLLEKFALVIEDDSYEW-VVLETGEVRAPFTSSYGEAISFLSTNRSLIRR-----QQETHNANL-EAFAYISSRCADAMHVKAITRDEGIPVGMAVVACEELLKAV 414 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2315.6231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2315.6231.1 >prot_H-paniculata_contig2315.6231.1 ID=prot_H-paniculata_contig2315.6231.1|Name=mRNA_H-paniculata_contig2315.6231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=721bp MRWLTKSGRQVGFTATHFQPRRSLSLLLVSSSTAWRTAAEYIMVTSCARNback to top mRNA from alignment at H-paniculata_contig2315:4000..13750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2315.6231.1 ID=mRNA_H-paniculata_contig2315.6231.1|Name=mRNA_H-paniculata_contig2315.6231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9751bp|location=Sequence derived from alignment at H-paniculata_contig2315:4000..13750+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2315:4000..13750+ >mRNA_H-paniculata_contig2315.6231.1 ID=mRNA_H-paniculata_contig2315.6231.1|Name=mRNA_H-paniculata_contig2315.6231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4326bp|location=Sequence derived from alignment at H-paniculata_contig2315:4000..13750+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |