mRNA_H-paniculata_contig23140.6228.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A6H5JRN1_9PHAE (CYTOSOL_AP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRN1_9PHAE) HSP 1 Score: 179 bits (454), Expect = 4.110e-51 Identity = 88/109 (80.73%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 SDGLARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
S GL AKA++SGVSLCRDLVN+PPN+LTPG+LAD A +IA+DHGLE EILEE+EIV GMGAYMGVAQGAVFPPKFIHLTYKP G KKVAL+GKGLTFDSGGYNIK
Sbjct: 301 SAGLDAAKAVASGVSLCRDLVNSPPNMLTPGALADAAAKIAEDHGLECEILEEEEIVALGMGAYMGVAQGAVFPPKFIHLTYKPSGTPKKKVALIGKGLTFDSGGYNIK 409
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A836CNG8_9STRA (Leucyl aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG8_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.220e-41 Identity = 67/100 (67.00%), Postives = 88/100 (88.00%), Query Frame = 1
Query: 28 ISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
+++GV+L RDLVNAPPN LTP ++AD AV IA++H +E EILEE+++ + GMGAY+GV+QG+V PPKFIH+TY+P G++ KKVAL+GKGLTFDSGGYNIK
Sbjct: 198 VAAGVNLARDLVNAPPNYLTPAAMADAAVAIAQEHSMECEILEEEQVRELGMGAYLGVSQGSVLPPKFIHITYRPSGDVKKKVALIGKGLTFDSGGYNIK 297
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A7R9YB08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB08_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.260e-40 Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 1
Query: 16 RAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
RAKAI SGV L +DLV+AP NVLTP S+A++A +AK+ GLE EI +++EI+KR MGAY GVA+GAV PPKFIHL YKP GE KVA+VGKGLTFDSGGYN+K
Sbjct: 264 RAKAIWSGVQLAKDLVSAPANVLTPTSMAEMAASLAKELGLECEIFDKEEILKRKMGAYYGVAKGAVHPPKFIHLCYKPSGETKTKVAIVGKGLTFDSGGYNLK 367
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A7S2RIM1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIM1_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.850e-39 Identity = 73/108 (67.59%), Postives = 93/108 (86.11%), Query Frame = 1
Query: 16 RAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAV---FPPKFIHLTYKPE-GEILKKVALVGKGLTFDSGGYNIK 327
+A+ ++SG++LCRDLV AP NVLTP S+ADVA IA+ HG+EAEILE+DEI+ RGMGAYMGVAQG+V P+FIHLTYKP+ GE+ K++A++GKGLTFDSGGYN+K
Sbjct: 262 KARGLASGINLCRDLVGAPANVLTPESMADVARYIAEVHGMEAEILEKDEILARGMGAYMGVAQGSVPGAGDPRFIHLTYKPKAGEVKKRLAVIGKGLTFDSGGYNLK 369
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A7S2G445_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G445_9STRA) HSP 1 Score: 146 bits (369), Expect = 4.290e-39 Identity = 71/111 (63.96%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 1 SDGLARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTY--KPEGEILKKVALVGKGLTFDSGGYNIK 327
++ + RA+ I SGVSLC+DLVNAP NV+TP S+A A IAK+HG+E EILE+ E+ GMGAYMGVA G++ PPKFIHLTY K +G + KK+A+VGKGLTFDSGGYN+K
Sbjct: 267 TEAVKRARGIMSGVSLCKDLVNAPANVVTPQSMAQTAEDIAKEHGMEVEILEQSEVEAMGMGAYMGVAMGSLDPPKFIHLTYRAKQDGPVKKKMAIVGKGLTFDSGGYNLK 377
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A7S1TP27_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP27_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.270e-38 Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 10 LARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
+A A + SGV L RDLV+AP NV+TP S+A +A +AK+ G E EIL+ DEI++R MGAY GVA+GAV PPKFIHLTYKPEGE+ KKV +VGKGLTFDSGGYN+K
Sbjct: 285 IAAASGLWSGVQLARDLVSAPANVVTPTSMAQMAETLAKEVGFECEILDTDEILERKMGAYYGVAKGAVHPPKFIHLTYKPEGEVKKKVCIVGKGLTFDSGGYNLK 390
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A7S3Z8D0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8D0_9EUKA) HSP 1 Score: 145 bits (366), Expect = 1.330e-38 Identity = 68/103 (66.02%), Postives = 85/103 (82.52%), Query Frame = 1
Query: 19 AKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
A+ ++SGV L +DLV APPN LTP S+A VA +I+KD GL ILE++E K GMG+Y+GVAQGA+ PPKFIHLTYKP+GE+ K+AL+GKGLTFDSGGYN+K
Sbjct: 295 ARGVTSGVRLAKDLVGAPPNYLTPSSMAGVAEKISKDLGLSLTILEQEECEKLGMGSYLGVAQGAIEPPKFIHLTYKPKGEVKSKIALIGKGLTFDSGGYNLK 397
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: A0A0G4F1D4_VITBC (CYTOSOL_AP domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F1D4_VITBC) HSP 1 Score: 145 bits (365), Expect = 1.680e-38 Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1
Query: 10 LARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
+A +KA ++G+ +DLV APPNVL P +LA A ++AK+ GLEA IL+ED IV + MGAY+GVAQGAV PP+FIHLTYKPEGE+ +KVA+VGKGLTFDSGGYN+K
Sbjct: 275 VANSKAAAAGIIFAKDLVAAPPNVLHPMTLAKAAEEMAKETGLEATILDEDAIVAKKMGAYLGVAQGAVHPPRFIHLTYKPEGEVKRKVAIVGKGLTFDSGGYNLK 380
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: AMPA_SYNSC (Probable cytosol aminopeptidase n=26 Tax=Synechococcus TaxID=1129 RepID=AMPA_SYNSC) HSP 1 Score: 141 bits (355), Expect = 1.330e-37 Identity = 66/107 (61.68%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 7 GLARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
G A A +GV L R+LV APPNV+TP +LAD A IAKDHGLE ++LE + +GMGA++ V+QG+ PPKFIHL Y+PEGE+ ++VALVGKGLTFDSGGYN+K
Sbjct: 161 GFAAVNATCAGVELARELVAAPPNVVTPAALADTAAGIAKDHGLELKVLERSDCEAKGMGAFLAVSQGSDLPPKFIHLIYRPEGEVKRRVALVGKGLTFDSGGYNLK 267
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Match: K9XBN2_9CHRO (Probable cytosol aminopeptidase n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9XBN2_9CHRO) HSP 1 Score: 138 bits (348), Expect = 1.400e-36 Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 10 LARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEILEEDEIVKRGMGAYMGVAQGAVFPPKFIHLTYKPEGEILKKVALVGKGLTFDSGGYNIK 327
+ARA +I SGV+L R+LV APPN +TP +LA+ A +IA+DHGL+ EILE +E K GMGA++GVAQ + PPKFIHLTYKPEG +++A++GKGLTFDSGG NIK
Sbjct: 166 IARANSICSGVNLARELVAAPPNEVTPITLAETAQKIAEDHGLQVEILEREECEKLGMGAFLGVAQASDLPPKFIHLTYKPEGTPKRRLAIIGKGLTFDSGGLNIK 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23140.6228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23140.6228.1 >prot_H-paniculata_contig23140.6228.1 ID=prot_H-paniculata_contig23140.6228.1|Name=mRNA_H-paniculata_contig23140.6228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp SDGLARAKAISSGVSLCRDLVNAPPNVLTPGSLADVAVQIAKDHGLEAEIback to top mRNA from alignment at H-paniculata_contig23140:1961..3630+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23140.6228.1 ID=mRNA_H-paniculata_contig23140.6228.1|Name=mRNA_H-paniculata_contig23140.6228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1670bp|location=Sequence derived from alignment at H-paniculata_contig23140:1961..3630+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23140:1961..3630+ >mRNA_H-paniculata_contig23140.6228.1 ID=mRNA_H-paniculata_contig23140.6228.1|Name=mRNA_H-paniculata_contig23140.6228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig23140:1961..3630+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |