prot_H-paniculata_contig23132.6224.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23132.6224.1
Unique Nameprot_H-paniculata_contig23132.6224.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
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BLAST of mRNA_H-paniculata_contig23132.6224.1 vs. uniprot
Match: A0A6H5K492_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K492_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.110e-35
Identity = 68/99 (68.69%), Postives = 80/99 (80.81%), Query Frame = 0 
Query:   38 REEGFRRLSVDRKGVLVQRLCEGVLQRAP---DSATAKEGFDKVAGPVWTRLRGLLHAVGGLNGVQRQSPKVVAESLLCVRLCRGVVVACGSAGERRTL 133
            R++GFRRLSVD +G+LVQRLCEGVL RA    + A+AKEGF+KV GPVW R +GLLHAVGGL+G QRQSP+VV+ESL CVRLCRGV V CG+A     L
Sbjct:  135 RDQGFRRLSVDLQGLLVQRLCEGVLNRAALPSEGASAKEGFEKVVGPVWERFQGLLHAVGGLSGKQRQSPRVVSESLFCVRLCRGVAVGCGAAASHYEL 233
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BLAST of mRNA_H-paniculata_contig23132.6224.1 vs. uniprot
Match: D7FX52_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX52_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 9.110e-33
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 0 
Query:    1 MGVLVCREKASATTSLPLWWDIVAVYGSGGAEGGL---------PRREEGFRRLSVDRKGVLVQRLCEGVLQRAP---DSATAKEGFDKVAGPVWTRLRGLLHAVGGLNGVQ 100
            MGVLV R KA +TTSLPLWW+IVA Y  G    G            R++GFRRLSVD +G+LVQRLCEGVL R+    + A+AKEGF+KV GPVW R RGLLHAVGGL+GV+
Sbjct:  742 MGVLVSRTKAPSTTSLPLWWEIVAAYDGGRQAAGAGXXXXXXXXXXRDQGFRRLSVDLQGLLVQRLCEGVLNRSALPSEGASAKEGFEKVVGPVWERFRGLLHAVGGLSGVR 853
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23132.6224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K492_9PHAE1.110e-3568.69CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FX52_ECTSI9.110e-3360.71Importin N-terminal domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23132contigH-paniculata_contig23132:328..2503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23132.6224.1mRNA_H-paniculata_contig23132.6224.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23132 210..2510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23132.6224.1 ID=prot_H-paniculata_contig23132.6224.1|Name=mRNA_H-paniculata_contig23132.6224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MGVLVCREKASATTSLPLWWDIVAVYGSGGAEGGLPRREEGFRRLSVDRK
GVLVQRLCEGVLQRAPDSATAKEGFDKVAGPVWTRLRGLLHAVGGLNGVQ
RQSPKVVAESLLCVRLCRGVVVACGSAGERRTLACGVGGHGRIGLMQILS
L*
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